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Carg15004 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15004
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionVQ motif-containing protein 10-like
Genome locationCarg_Chr07:582840..583163
RNA-Seq ExpressionCarg15004
SyntenyCarg15004
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039608 - VQ motif-containing protein 1/10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026461.1 hypothetical protein SDJN02_10461, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-51100Show/hide
Query:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED
        MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED
Subjt:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED

Query:  LNWIWAD
        LNWIWAD
Subjt:  LNWIWAD

KAG7034723.1 hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-1553.1Show/hide
Query:  MANSK--AAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTA----GGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLE
        MA+SK   AG VKVV IEYHH+ TDV++FKSVVQTLTG +S+A    GG  RK+ RV             E  +S    T S L STS++DLD   L L 
Subjt:  MANSK--AAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTA----GGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLE

Query:  LPSMEDLNWIWAD
        LP++EDLNWIWAD
Subjt:  LPSMEDLNWIWAD

XP_022926399.1 VQ motif-containing protein 10-like [Cucurbita moschata]2.4e-5099.07Show/hide
Query:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED
        MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTS+EDLDPLLLKLELPSMED
Subjt:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED

Query:  LNWIWAD
        LNWIWAD
Subjt:  LNWIWAD

XP_023003955.1 VQ motif-containing protein 10 [Cucurbita maxima]1.9e-4794.39Show/hide
Query:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED
        MANSKAAGPVKVVFIEYHHIQTDV+NFKSVVQTLTGMNSTAGGNTRKK RVDENIID RSARFEEST SCETDTTSS+QSTS+EDLDPLLLKLELPSMED
Subjt:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED

Query:  LNWIWAD
        LNWIWAD
Subjt:  LNWIWAD

XP_023518171.1 VQ motif-containing protein 10-like [Cucurbita pepo subsp. pepo]2.5e-4794.39Show/hide
Query:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED
        MANSKAAGPVKVVFIEYHHIQTDV+NFKSVVQTLTGMNS AGGNTRKKRRVDENIID RS RFEESTESCETDTTSS QSTS+EDLDPLLLKLELPSMED
Subjt:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED

Query:  LNWIWAD
        LNWIWAD
Subjt:  LNWIWAD

TrEMBL top hitse value%identityAlignment
A0A0A0KNW8 VQ domain-containing protein8.1e-1247.75Show/hide
Query:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTA----GGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELP
        M NSK    V+VV IEYHHIQTD +NFKSVVQ+LTG +S A    GG   +KR+     + +++   E  T          + + S++DLD  LL LELP
Subjt:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTA----GGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELP

Query:  SMEDLNWIWAD
        SMEDLNWI  D
Subjt:  SMEDLNWIWAD

A0A5D3CN21 VQ motif-containing protein 1-like5.2e-1145.95Show/hide
Query:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNST----AGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELP
        M N K    V+VV IEYHHIQTD +NFKSVVQ+LTG +S+     G   RK++RV         AR    +      +   + + S++DLD  LL LELP
Subjt:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNST----AGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELP

Query:  SMEDLNWIWAD
        SMEDL+WI  D
Subjt:  SMEDLNWIWAD

A0A6J1CYB0 uncharacterized protein LOC1110157003.3e-1347.75Show/hide
Query:  AGPVKVVFIEYHHIQTDVTNFKSVVQTLTGM----------NSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELP
        + PVKVV IEYHH+QTDV+NFKSVVQ+LTG            S   G+T K+RR D   +D+ +A  +   ++  T T   L + S++DLD  LLK  LP
Subjt:  AGPVKVVFIEYHHIQTDVTNFKSVVQTLTGM----------NSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELP

Query:  SMEDLNWIWAD
        S++DL+WIWAD
Subjt:  SMEDLNWIWAD

A0A6J1EF02 VQ motif-containing protein 10-like1.2e-5099.07Show/hide
Query:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED
        MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTS+EDLDPLLLKLELPSMED
Subjt:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED

Query:  LNWIWAD
        LNWIWAD
Subjt:  LNWIWAD

A0A6J1KT83 VQ motif-containing protein 109.1e-4894.39Show/hide
Query:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED
        MANSKAAGPVKVVFIEYHHIQTDV+NFKSVVQTLTGMNSTAGGNTRKK RVDENIID RSARFEEST SCETDTTSS+QSTS+EDLDPLLLKLELPSMED
Subjt:  MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMED

Query:  LNWIWAD
        LNWIWAD
Subjt:  LNWIWAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTCCAAGGCGGCGGGTCCAGTGAAGGTGGTGTTTATTGAGTACCACCATATTCAGACCGACGTCACAAATTTCAAGTCCGTCGTTCAGACCCTCACCGGCAT
GAATTCCACCGCCGGTGGAAACACCAGGAAGAAGCGGCGAGTGGATGAGAATATTATTGATGCAAGATCAGCCCGGTTTGAAGAAAGTACTGAAAGTTGTGAGACCGATA
CGACGTCGTCTCTGCAGAGCACGTCGTATGAGGACTTGGATCCCTTGCTGCTCAAGCTCGAGCTTCCTTCCATGGAGGATCTCAACTGGATTTGGGCTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACTCCAAGGCGGCGGGTCCAGTGAAGGTGGTGTTTATTGAGTACCACCATATTCAGACCGACGTCACAAATTTCAAGTCCGTCGTTCAGACCCTCACCGGCAT
GAATTCCACCGCCGGTGGAAACACCAGGAAGAAGCGGCGAGTGGATGAGAATATTATTGATGCAAGATCAGCCCGGTTTGAAGAAAGTACTGAAAGTTGTGAGACCGATA
CGACGTCGTCTCTGCAGAGCACGTCGTATGAGGACTTGGATCCCTTGCTGCTCAAGCTCGAGCTTCCTTCCATGGAGGATCTCAACTGGATTTGGGCTGATTAA
Protein sequenceShow/hide protein sequence
MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTAGGNTRKKRRVDENIIDARSARFEESTESCETDTTSSLQSTSYEDLDPLLLKLELPSMEDLNWIWAD