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Carg15010 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15010
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProteasome subunit alpha type-5
Genome locationCarg_Chr07:600358..600723
RNA-Seq ExpressionCarg15010
SyntenyCarg15010
Gene Ontology termsGO:0005622 - intracellular (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052545.1 hypothetical protein E6C27_scaffold120G001480 [Cucumis melo var. makuwa]6.5e-2046.5Show/hide
Query:  MGFKI----QPSPSPNYLYYLSISLSLILFFLLIS-SSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTT------------FTAKKLQME-----------
        MGFKI     P  SPNYL +  ISLSLILFFL+ S +SS +PLP    N+  HHR    +H  A  TT            + +KKL+ME           
Subjt:  MGFKI----QPSPSPNYLYYLSISLSLILFFLLIS-SSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTT------------FTAKKLQME-----------

Query:  -----------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL
                   +N  KK +K +AFS MLPKGFVPPSGSSPCHNENP+   +AFYCHL
Subjt:  -----------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL

KAG6581427.1 hypothetical protein SDJN03_21429, partial [Cucurbita argyrosperma subsp. sororia]4.1e-2253.74Show/hide
Query:  MGFKIQPSPSPNYLYYLSISLSLILFFLLISSSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTTF-----------TAKKLQMETNKKKKK----------
        MGFKIQ   SP    +  IS+SLILFFLLISSSS+  L   R ++   HRHRTTLH GAPTT F            A KLQM    K KK          
Subjt:  MGFKIQPSPSPNYLYYLSISLSLILFFLLISSSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTTF-----------TAKKLQMETNKKKKK----------

Query:  ------NKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHLSA
              NK TAFS MLPKGFVPPSGSSPCHN++P+    AFYCHLSA
Subjt:  ------NKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHLSA

KAG6594469.1 hypothetical protein SDJN03_11022, partial [Cucurbita argyrosperma subsp. sororia]9.2e-5997.52Show/hide
Query:  MGFKIQPSPSPNYLYYLSISLSLILFFLLISSSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSS
        MGFKIQPSPSPNYLYYLSISLSLILFFLLIS SSAQPLPLRR NLAAHHRHRTTLHVGAPTTTFTAKKLQMETNKKKKKNK TAFSAMLPKGFVPPSGSS
Subjt:  MGFKIQPSPSPNYLYYLSISLSLILFFLLISSSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSS

Query:  PCHNENPEFVAFYCHLSATNP
        PCHNENPEFVAFYCHLSATNP
Subjt:  PCHNENPEFVAFYCHLSATNP

KAG7026467.1 hypothetical protein SDJN02_10467, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-61100Show/hide
Query:  MGFKIQPSPSPNYLYYLSISLSLILFFLLISSSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSS
        MGFKIQPSPSPNYLYYLSISLSLILFFLLISSSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSS
Subjt:  MGFKIQPSPSPNYLYYLSISLSLILFFLLISSSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSS

Query:  PCHNENPEFVAFYCHLSATNP
        PCHNENPEFVAFYCHLSATNP
Subjt:  PCHNENPEFVAFYCHLSATNP

KGN49393.1 hypothetical protein Csa_004373 [Cucumis sativus]7.2e-1946.2Show/hide
Query:  MGFKIQPS-PSPNYLYYLSISLSLILFFLLI-SSSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTT--------------FTAKKLQME------------
        MGFKI  S  SPNYL +  ISLSLILFFLL  ++SS +PLP   P   ++ RHRTT+  G+  TT              + + KL+ME            
Subjt:  MGFKIQPS-PSPNYLYYLSISLSLILFFLLI-SSSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTT--------------FTAKKLQME------------

Query:  ------------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL
                    +N K K +K +AFSAMLPKGFVPPSGSSPCHNE+P+   +AFYCHL
Subjt:  ------------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL

TrEMBL top hitse value%identityAlignment
A0A0A0KIK1 Uncharacterized protein3.5e-1946.2Show/hide
Query:  MGFKIQPS-PSPNYLYYLSISLSLILFFLLI-SSSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTT--------------FTAKKLQME------------
        MGFKI  S  SPNYL +  ISLSLILFFLL  ++SS +PLP   P   ++ RHRTT+  G+  TT              + + KL+ME            
Subjt:  MGFKIQPS-PSPNYLYYLSISLSLILFFLLI-SSSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTT--------------FTAKKLQME------------

Query:  ------------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL
                    +N K K +K +AFSAMLPKGFVPPSGSSPCHNE+P+   +AFYCHL
Subjt:  ------------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL

A0A151R872 Uncharacterized protein5.5e-0938.94Show/hide
Query:  ILFFLLISSSSAQPLPLRRPNLAAHHRHRTTL----HVGAPTTTFTA----KKLQMETNKKKKK------NKATAFSAMLPKGFVPPSGSSPCHNENPEF
        ILF    ++SS Q +  + P+ +    H   +    +  + +T+FT     KK +++ NK  +K       ++ +FSAMLPKGFVPPSGSSPCHN+ P  
Subjt:  ILFFLLISSSSAQPLPLRRPNLAAHHRHRTTL----HVGAPTTTFTA----KKLQMETNKKKKK------NKATAFSAMLPKGFVPPSGSSPCHNENPEF

Query:  V-AFYCHLSATNP
        + +F+CHLS T P
Subjt:  V-AFYCHLSATNP

A0A2N9J2Z4 Uncharacterized protein2.5e-0943.22Show/hide
Query:  YYLSISLSLILFFLLISSSS--AQPLPLRRPNLAAHHRHRTTLHVGAPTTTF--------TAKKLQMETNKKKKKN-KATAFSAMLPKGFVPPSGSSPCH
        +Y  + LSL+L      SSS   QP      N+ AHH   + +     T TF          K+ +M   +KK KN K   FS MLPKG VPPSGSSPCH
Subjt:  YYLSISLSLILFFLLISSSS--AQPLPLRRPNLAAHHRHRTTLHVGAPTTTF--------TAKKLQMETNKKKKKN-KATAFSAMLPKGFVPPSGSSPCH

Query:  NENPEFVAFYCHLSATNP
        NE P+ V  YC LS T P
Subjt:  NENPEFVAFYCHLSATNP

A0A438JP87 Uncharacterized protein2.1e-0858.18Show/hide
Query:  KKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPEFVAFYCHLSATNP
        KK +    K  K  +   FSAMLPKGFVPPSGSSPCHN+ P  +AFYC LS+  P
Subjt:  KKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPEFVAFYCHLSATNP

A0A5A7UFQ9 Uncharacterized protein3.1e-2046.5Show/hide
Query:  MGFKI----QPSPSPNYLYYLSISLSLILFFLLIS-SSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTT------------FTAKKLQME-----------
        MGFKI     P  SPNYL +  ISLSLILFFL+ S +SS +PLP    N+  HHR    +H  A  TT            + +KKL+ME           
Subjt:  MGFKI----QPSPSPNYLYYLSISLSLILFFLLIS-SSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTT------------FTAKKLQME-----------

Query:  -----------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL
                   +N  KK +K +AFS MLPKGFVPPSGSSPCHNENP+   +AFYCHL
Subjt:  -----------TNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPE--FVAFYCHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G18335.1 unknown protein1.2e-0849.28Show/hide
Query:  RHRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENP-EFVAFYCHLS
        RHR  LH  A      AKK     N   +  +   FS MLPKGFVPPSGSSPCHN+NP      +C LS
Subjt:  RHRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENP-EFVAFYCHLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCAAGATTCAACCCTCCCCATCACCAAATTACCTCTACTACCTCTCAATCTCTCTCTCACTCATCCTCTTCTTTCTCCTAATTTCCTCCTCATCCGCTCAACC
CCTTCCCCTCCGCCGCCCCAACCTCGCCGCTCATCACCGGCATCGGACCACCCTCCACGTCGGCGCACCCACCACCACATTCACAGCCAAGAAATTACAAATGGAGACCA
ACAAGAAGAAGAAAAAGAATAAGGCCACGGCTTTTTCTGCGATGCTTCCGAAGGGATTTGTCCCTCCCTCTGGTTCGTCTCCTTGCCATAACGAAAATCCTGAATTTGTT
GCCTTTTATTGCCATCTTTCTGCAACCAATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCAAGATTCAACCCTCCCCATCACCAAATTACCTCTACTACCTCTCAATCTCTCTCTCACTCATCCTCTTCTTTCTCCTAATTTCCTCCTCATCCGCTCAACC
CCTTCCCCTCCGCCGCCCCAACCTCGCCGCTCATCACCGGCATCGGACCACCCTCCACGTCGGCGCACCCACCACCACATTCACAGCCAAGAAATTACAAATGGAGACCA
ACAAGAAGAAGAAAAAGAATAAGGCCACGGCTTTTTCTGCGATGCTTCCGAAGGGATTTGTCCCTCCCTCTGGTTCGTCTCCTTGCCATAACGAAAATCCTGAATTTGTT
GCCTTTTATTGCCATCTTTCTGCAACCAATCCTTGA
Protein sequenceShow/hide protein sequence
MGFKIQPSPSPNYLYYLSISLSLILFFLLISSSSAQPLPLRRPNLAAHHRHRTTLHVGAPTTTFTAKKLQMETNKKKKKNKATAFSAMLPKGFVPPSGSSPCHNENPEFV
AFYCHLSATNP