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Carg15032 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15032
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBEST Arabidopsis thaliana protein match is: RPM1 interacting protein 13 .
Genome locationCarg_Chr16:193228..194246
RNA-Seq ExpressionCarg15032
SyntenyCarg15032
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576620.1 hypothetical protein SDJN03_24194, partial [Cucurbita argyrosperma subsp. sororia]4.3e-85100Show/hide
Query:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFP
        MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFP
Subjt:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFP

Query:  TTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL
        TTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL
Subjt:  TTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL

XP_022140919.1 uncharacterized protein LOC111011466 [Momordica charantia]3.0e-3855.77Show/hide
Query:  MKGAK-KRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPF
        M G+K K R     + RMQ  E   PLR +LCVKN+  +DLKRFD  E+CY+LDFDPFHS + ++S  D+DS++S+V EKGQVACRDYPHARYLC+ FPF
Subjt:  MKGAK-KRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPF

Query:  PTTPHQTYCEMCYCYVCDAIAPCDHWTSHC---HADQFSKRERRSNSNNNHKPPPL
         TTPHQ+ C MC+CYVCD+ APCDHW+ HC   H +   +  R   +NN + P  L
Subjt:  PTTPHQTYCEMCYCYVCDAIAPCDHWTSHC---HADQFSKRERRSNSNNNHKPPPL

XP_022922610.1 uncharacterized protein LOC111430566 [Cucurbita moschata]1.3e-8196.77Show/hide
Query:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSH--SDSDSDVSLVAEKGQVACRDYPHARYLCLNFP
        MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSH  SDSDSDVSLVAEKGQVACRDYPHARYLCL FP
Subjt:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSH--SDSDSDVSLVAEKGQVACRDYPHARYLCLNFP

Query:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL
        FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNS+NNH PPPLL
Subjt:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL

XP_022984372.1 uncharacterized protein LOC111482692 [Cucurbita maxima]6.6e-7892.16Show/hide
Query:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFP
        MKGAKK+RRLNSKS RMQKEED+EPLRP+LCVKNINKLDLKRFDAM++CYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCL  PFP
Subjt:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFP

Query:  TTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL
        TTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQ  KRERRSNSNNNH PPP L
Subjt:  TTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL

XP_023552151.1 uncharacterized protein LOC111809913 [Cucurbita pepo subsp. pepo]4.6e-7994.19Show/hide
Query:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSH--SDSDSDVSLVAEKGQVACRDYPHARYLCLNFP
        MKGAKKRRRLNSKSKRMQKEEDDEPLRP+LCVKN NKLDLKRFDA EECYLLDF+PFHSLNQTLSH  SDSDSDVSLVAEKGQVACRDYPHARYLCL FP
Subjt:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSH--SDSDSDVSLVAEKGQVACRDYPHARYLCLNFP

Query:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL
        FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQF KRERRSNSNNNH PPPLL
Subjt:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL

TrEMBL top hitse value%identityAlignment
A0A6J1AYQ8 uncharacterized protein LOC1104224979.7e-3549.32Show/hide
Query:  NSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTL---SHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFPTTPHQTY
        N K K+ ++EED  PLRP+ C+K    +D+KR + ME+C++LDF+PF S++  +   ++   D D+S+V EKGQ+ACRDYPH+R+LCL FPF TTPH+ +
Subjt:  NSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTL---SHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFPTTPHQTY

Query:  CEMCYCYVCDAIAPCDHWTSHCHADQFS---KRERRSNSNNNHKPPPL
        C +CYCYVCD+ APC +W +HCHA +     K +R+S    N +PP L
Subjt:  CEMCYCYVCDAIAPCDHWTSHCHADQFS---KRERRSNSNNNHKPPPL

A0A6J1CH43 uncharacterized protein LOC1110114661.4e-3855.77Show/hide
Query:  MKGAK-KRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPF
        M G+K K R     + RMQ  E   PLR +LCVKN+  +DLKRFD  E+CY+LDFDPFHS + ++S  D+DS++S+V EKGQVACRDYPHARYLC+ FPF
Subjt:  MKGAK-KRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPF

Query:  PTTPHQTYCEMCYCYVCDAIAPCDHWTSHC---HADQFSKRERRSNSNNNHKPPPL
         TTPHQ+ C MC+CYVCD+ APCDHW+ HC   H +   +  R   +NN + P  L
Subjt:  PTTPHQTYCEMCYCYVCDAIAPCDHWTSHC---HADQFSKRERRSNSNNNHKPPPL

A0A6J1E9A2 uncharacterized protein LOC1114305666.2e-8296.77Show/hide
Query:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSH--SDSDSDVSLVAEKGQVACRDYPHARYLCLNFP
        MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSH  SDSDSDVSLVAEKGQVACRDYPHARYLCL FP
Subjt:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSH--SDSDSDVSLVAEKGQVACRDYPHARYLCLNFP

Query:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL
        FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNS+NNH PPPLL
Subjt:  FPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL

A0A6J1J202 uncharacterized protein LOC1114826923.2e-7892.16Show/hide
Query:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFP
        MKGAKK+RRLNSKS RMQKEED+EPLRP+LCVKNINKLDLKRFDAM++CYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCL  PFP
Subjt:  MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFP

Query:  TTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL
        TTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQ  KRERRSNSNNNH PPP L
Subjt:  TTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL

A0A6J5WUR1 Uncharacterized protein2.8e-3452.48Show/hide
Query:  GAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSHSD--------SDSDVSLVAEKGQVACRDYPHARYL
        G KK++R+  ++     EED  P+R +LCVK  NK+D+K+F+ +++C++LDFDPF  +    LS SD           DV++VAEKGQVACRDYPH+R+L
Subjt:  GAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSHSD--------SDSDVSLVAEKGQVACRDYPHARYL

Query:  CLNFPFPTTPHQTYCEMCYCYVCDAIAPCDHW-TSHCHADQ
        CL FPF TTPH++YCE+CYCYVCD+ APC  W  +HCHA +
Subjt:  CLNFPFPTTPHQTYCEMCYCYVCDAIAPCDHW-TSHCHADQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20310.1 RPM1 interacting protein 137.1e-2243.75Show/hide
Query:  EECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFPTTPHQTYCEMCYCYVCDAIAPCDHW------TSHCHADQFSK
        ++C +LD DP  +   T    D D DV +V +KG++ACRD+PH R+ C  + F +T H+ YC+MC+CYVCD  APC +W        HCHA+   K
Subjt:  EECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFPTTPHQTYCEMCYCYVCDAIAPCDHW------TSHCHADQFSK

AT4G27660.1 unknown protein3.8e-3147.89Show/hide
Query:  AKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSH---SDSDSDVSLVAEKGQVACRDYPHARYLCLNFPF
        +K+R+RL   SK  ++EE+  PLR + C+K   + D+K F+  E+C++LDFDP  S + + LS    S+ D DV++V EKGQVACRD+PH R+LCL FPF
Subjt:  AKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSH---SDSDSDVSLVAEKGQVACRDYPHARYLCLNFPF

Query:  PTTPHQTYCEMCYCYVCDAIAPCDHWTS-----HCHADQFSK
         ++ H ++C  CYCYVCD +APC +WT+     HC A + SK
Subjt:  PTTPHQTYCEMCYCYVCDAIAPCDHWTS-----HCHADQFSK

AT4G28690.1 BEST Arabidopsis thaliana protein match is: RPM1 interacting protein 13 (TAIR:AT2G20310.1)1.9e-2242.02Show/hide
Query:  DAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFPTTPHQTYCEMCYCYVCDAIAPCDHW-------TSHCHADQFSK
        D  ++C +LDFDP  +  +T+  +     V +V +KG+VACRD+PH R+ C  +PF +T HQT+CEMC+CYVCD  APC +W       T HCHA+   K
Subjt:  DAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFPTTPHQTYCEMCYCYVCDAIAPCDHW-------TSHCHADQFSK

Query:  R---ERRSNSNNNHKPPPL
            +R      N  P P+
Subjt:  R---ERRSNSNNNHKPPPL

AT5G54148.1 unknown protein1.5e-2447.46Show/hide
Query:  QKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFPTTPHQTYCEMCYCYVC
        +KEEDD PL  + C+K   + D+KRF+  E+C++LDFDPF S + + L+ +D   DV            DYPH R+ CLNFPF +TP+ ++C++CYCYVC
Subjt:  QKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLN-QTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFPTTPHQTYCEMCYCYVC

Query:  DAIAPCDHW---TSHCHA
        D  APC  W   TSHC+A
Subjt:  DAIAPCDHW---TSHCHA

AT5G54150.1 unknown protein1.9e-3048.76Show/hide
Query:  SKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFPTTPHQTYCEMC
        +++ +   EE+  PLR +LCVK   + D+KRF+  E+C++LDF+PF S +        D D+ ++ E GQVACRDYPH R+LCLNFPF +T + T+C++C
Subjt:  SKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFPTTPHQTYCEMC

Query:  YCYVCDAIAPCDHW-TSHCHA
        YC+VCD  APC  W +SHC+A
Subjt:  YCYVCDAIAPCDHW-TSHCHA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGAGCGAAGAAGCGAAGACGTTTGAATTCAAAGAGCAAGAGAATGCAAAAAGAAGAAGACGATGAGCCCCTCCGACCCATGTTGTGCGTCAAAAACATAAACAA
ATTGGATTTGAAGCGATTCGACGCAATGGAGGAGTGTTACCTCTTGGACTTCGACCCATTCCATTCCCTCAATCAAACGCTCTCTCACTCTGACTCTGATTCTGACGTCT
CGCTGGTGGCTGAAAAGGGTCAGGTGGCCTGTAGAGACTATCCGCACGCCAGGTATTTGTGTCTCAACTTTCCCTTCCCCACAACGCCCCATCAGACTTACTGTGAGATG
TGCTATTGTTACGTCTGCGATGCCATAGCTCCATGCGACCACTGGACGTCACACTGTCATGCCGATCAATTTTCGAAACGGGAAAGGCGATCCAACTCAAACAACAACCA
CAAGCCTCCTCCGCTTCTGTAG
mRNA sequenceShow/hide mRNA sequence
TCCGTGGTTGGGTGTGTGGTTGGGTGTGGGGTTGGATTGGTATATGGGATTTGGGGTAAGGCTTTGTTAAGTTAAGAGGCCCATATGGAAATTTGGGCTAACGCTTTGGA
TGGAACAGGCGCCACAGTCCAGACAGGATCAGCCAGAATTTAAATTTAAAATTGACCCACACGACCTGCCTACAAATGTAATACGACCAGGTTGAGATGGAAGGAGAAAG
ATGAAGGGAGCGAAGAAGCGAAGACGTTTGAATTCAAAGAGCAAGAGAATGCAAAAAGAAGAAGACGATGAGCCCCTCCGACCCATGTTGTGCGTCAAAAACATAAACAA
ATTGGATTTGAAGCGATTCGACGCAATGGAGGAGTGTTACCTCTTGGACTTCGACCCATTCCATTCCCTCAATCAAACGCTCTCTCACTCTGACTCTGATTCTGACGTCT
CGCTGGTGGCTGAAAAGGGTCAGGTGGCCTGTAGAGACTATCCGCACGCCAGGTATTTGTGTCTCAACTTTCCCTTCCCCACAACGCCCCATCAGACTTACTGTGAGATG
TGCTATTGTTACGTCTGCGATGCCATAGCTCCATGCGACCACTGGACGTCACACTGTCATGCCGATCAATTTTCGAAACGGGAAAGGCGATCCAACTCAAACAACAACCA
CAAGCCTCCTCCGCTTCTGTAGCTTTAGCGTTTCTTCTTCTACATTTTCATCAACAATATTTTGTCGCACCACCAATCCCTCATTTCGAGGAGGGTTTTTTCTAACTTAT
TTTTATCATTATCACTGATCCCCTTCACAACTTCTATGACACCAAATGTATAAATTTCCTATATTTATT
Protein sequenceShow/hide protein sequence
MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFPTTPHQTYCEM
CYCYVCDAIAPCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL