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Carg15039 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15039
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S acidic ribosomal protein P1
Genome locationCarg_Chr16:217552..218473
RNA-Seq ExpressionCarg15039
SyntenyCarg15039
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576627.1 60S acidic ribosomal protein P1-1, partial [Cucurbita argyrosperma subsp. sororia]2.6e-44100Show/hide
Query:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
        MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
Subjt:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE

Query:  SDDDM
        SDDDM
Subjt:  SDDDM

KAG7014679.1 60S acidic ribosomal protein P1-1 [Cucurbita argyrosperma subsp. argyrosperma]5.2e-48100Show/hide
Query:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
        MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
Subjt:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_022922611.1 60S acidic ribosomal protein P1 [Cucurbita moschata]9.7e-4798.2Show/hide
Query:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
        MSSSELACAYAALALYDDGIAI ADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPA EEKKEEPKEE
Subjt:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_022984373.1 60S acidic ribosomal protein P1 [Cucurbita maxima]1.1e-4596.4Show/hide
Query:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
        MS SELACAYAALALYDDGIAI ADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASA GASASAAAPA EEKKEEPKEE
Subjt:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_023551718.1 60S acidic ribosomal protein P1 [Cucurbita pepo subsp. pepo]2.8e-4697.3Show/hide
Query:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
        MSSSELACAYAALALYDDGIAI ADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASA GASASAAAPA EEKKEEPKEE
Subjt:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A6J1CGB2 60S acidic ribosomal protein P1-like4.9e-4491.89Show/hide
Query:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
        MS+SELACAYAA+ALYDDGIAI A+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAAPVSVAA A GA+ASAAAPA EEKKEEPKEE
Subjt:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1E4K8 60S acidic ribosomal protein P14.7e-4798.2Show/hide
Query:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
        MSSSELACAYAALALYDDGIAI ADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPA EEKKEEPKEE
Subjt:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1G2H4 60S acidic ribosomal protein P1-like2.0e-4292.79Show/hide
Query:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
        MS+SELACAYAALAL+DDGIAI ADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAA VSVAA A GA ASAAAPA EEKKEEPKEE
Subjt:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1HYH2 60S acidic ribosomal protein P1-like1.7e-4190.99Show/hide
Query:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
        MS+SEL CAYAALAL+DDGIAI ADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAA VSVAA A GA ASAAAPA EEK+EEPKEE
Subjt:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1JAB2 60S acidic ribosomal protein P15.2e-4696.4Show/hide
Query:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
        MS SELACAYAALALYDDGIAI ADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASA GASASAAAPA EEKKEEPKEE
Subjt:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-22.1e-2864.81Show/hide
Query:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGC-GGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEESDD
        ELAC+YA + L D+GIAI +DKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG  GGG  APVS AA A+   A+AAAPA EEKK+EP EESD 
Subjt:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGC-GGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEESDD

Query:  DMGFSLFD
        D+GF LFD
Subjt:  DMGFSLFD

P52855 60S acidic ribosomal protein P11.2e-3172.97Show/hide
Query:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE
        M+S ELAC YAAL L DDGIAI A+KIA +V AA + VESYWP+LFAKL EKR++ DL+L+VG GGG AAPV+ AA A GA A+AAAPA EEKKEE KEE
Subjt:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-17.3e-2963.55Show/hide
Query:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEESDDD
        ELAC+YA + L D+GIAI ADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APV+ AA A+G  A+AA  A E+KK+EP EESD D
Subjt:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEESDDD

Query:  MGFSLFD
        +GF LFD
Subjt:  MGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-31.5e-2965.74Show/hide
Query:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEE-KKEEPKEESDD
        ELAC+YA + L D+GIAI ADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APV+ AA A+G  A+AAAPA EE KK+EP EESD 
Subjt:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEE-KKEEPKEESDD

Query:  DMGFSLFD
        D+GF LFD
Subjt:  DMGFSLFD

Q9HGV0 60S acidic ribosomal protein P13.2e-2462.5Show/hide
Query:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLC-VESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKE
        MS++ELAC+YAAL L DDG+ I ADKI  ++ AA +  VE  W SLFAK  E +DI DLL NVG  GGAAAP +V  +A+GA+A A A A EEKKEE KE
Subjt:  MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLC-VESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD+DMGF LFD
Subjt:  ESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family5.2e-3063.55Show/hide
Query:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEESDDD
        ELAC+YA + L D+GIAI ADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APV+ AA A+G  A+AA  A E+KK+EP EESD D
Subjt:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEESDDD

Query:  MGFSLFD
        +GF LFD
Subjt:  MGFSLFD

AT1G01100.2 60S acidic ribosomal protein family5.2e-3063.55Show/hide
Query:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEESDDD
        ELAC+YA + L D+GIAI ADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APV+ AA A+G  A+AA  A E+KK+EP EESD D
Subjt:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEESDDD

Query:  MGFSLFD
        +GF LFD
Subjt:  MGFSLFD

AT1G01100.4 60S acidic ribosomal protein family5.2e-3063.55Show/hide
Query:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEESDDD
        ELAC+YA + L D+GIAI ADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APV+ AA A+G  A+AA  A E+KK+EP EESD D
Subjt:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEESDDD

Query:  MGFSLFD
        +GF LFD
Subjt:  MGFSLFD

AT5G47700.1 60S acidic ribosomal protein family1.0e-3065.74Show/hide
Query:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEE-KKEEPKEESDD
        ELAC+YA + L D+GIAI ADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APV+ AA A+G  A+AAAPA EE KK+EP EESD 
Subjt:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEE-KKEEPKEESDD

Query:  DMGFSLFD
        D+GF LFD
Subjt:  DMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family1.0e-3065.74Show/hide
Query:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEE-KKEEPKEESDD
        ELAC+YA + L D+GIAI ADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APV+ AA A+G  A+AAAPA EE KK+EP EESD 
Subjt:  ELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEE-KKEEPKEESDD

Query:  DMGFSLFD
        D+GF LFD
Subjt:  DMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGTAGTGAGCTTGCCTGCGCCTACGCCGCCCTAGCTCTTTACGACGATGGGATTGCAATCGCTGCGGATAAGATTGCTGCTGTAGTAGCAGCTGCGGGGCTCTG
TGTGGAATCATACTGGCCCAGCCTGTTTGCAAAATTGGCAGAGAAGAGGGATATTGGGGACCTTCTTCTGAATGTTGGCTGTGGAGGTGGCGCTGCGGCTCCCGTGTCTG
TTGCTGCTTCTGCCAGTGGTGCTTCCGCCTCTGCTGCTGCTCCTGCTTTTGAGGAAAAGAAGGAGGAGCCGAAGGAAGAGAGCGACGACGACATGGGATTCAGTTTATTC
GATTAG
mRNA sequenceShow/hide mRNA sequence
CGTTCCATAATATATGGCCATACTTCCACCTATGGTGATCGATCACTCTACACGCATTTCCCTCCAAATACCATCCTGGTCCTCATTGCATACCAGACGCTACTCTAACC
ATGTCTAGTAGTGAGCTTGCCTGCGCCTACGCCGCCCTAGCTCTTTACGACGATGGGATTGCAATCGCTGCGGATAAGATTGCTGCTGTAGTAGCAGCTGCGGGGCTCTG
TGTGGAATCATACTGGCCCAGCCTGTTTGCAAAATTGGCAGAGAAGAGGGATATTGGGGACCTTCTTCTGAATGTTGGCTGTGGAGGTGGCGCTGCGGCTCCCGTGTCTG
TTGCTGCTTCTGCCAGTGGTGCTTCCGCCTCTGCTGCTGCTCCTGCTTTTGAGGAAAAGAAGGAGGAGCCGAAGGAAGAGAGCGACGACGACATGGGATTCAGTTTATTC
GATTAG
Protein sequenceShow/hide protein sequence
MSSSELACAYAALALYDDGIAIAADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASASGASASAAAPAFEEKKEEPKEESDDDMGFSLF
D