; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15051 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15051
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding protein 2-like isoform X1
Genome locationCarg_Chr16:257733..261947
RNA-Seq ExpressionCarg15051
SyntenyCarg15051
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576639.1 RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia]8.2e-12280.62Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
        MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI

Query:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  VLAALIIIFFTVVFWLLNICTFVFVSRQMVLRFQVVWLEECEFVDAILHSTGGKSCCNLLAFLVQGQVVGIVESVELCDFAGFARTVKL
                                                                CNLLAFLVQGQVVGIVESVELCDFAGFARTVKL
Subjt:  VLAALIIIFFTVVFWLLNICTFVFVSRQMVLRFQVVWLEECEFVDAILHSTGGKSCCNLLAFLVQGQVVGIVESVELCDFAGFARTVKL

KAG7014691.1 RNA-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma]1.8e-161100Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
        MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI

Query:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  VLAALIIIFFTVVFWLLNICTFVFVSRQMVLRFQVVWLEECEFVDAILHSTGGKSCCNLLAFLVQGQVVGIVESVELCDFAGFARTVKL
        VLAALIIIFFTVVFWLLNICTFVFVSRQMVLRFQVVWLEECEFVDAILHSTGGKSCCNLLAFLVQGQVVGIVESVELCDFAGFARTVKL
Subjt:  VLAALIIIFFTVVFWLLNICTFVFVSRQMVLRFQVVWLEECEFVDAILHSTGGKSCCNLLAFLVQGQVVGIVESVELCDFAGFARTVKL

XP_022923071.1 RNA-binding protein 2-like isoform X1 [Cucurbita moschata]5.2e-12498.7Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
        MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLP+YYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI

Query:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  VLAALIIIFFTVVFWLLNICTFVFVSRQMVL
        VLAALIIIFFTVVFWLLNICTFVFV RQM L
Subjt:  VLAALIIIFFTVVFWLLNICTFVFVSRQMVL

XP_023553421.1 RNA-binding protein 2-like isoform X1 [Cucurbita pepo subsp. pepo]5.2e-12498.7Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
        MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRS+KISSYGGQSARPVGGGVPGHSINDPPPI
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI

Query:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  VLAALIIIFFTVVFWLLNICTFVFVSRQMVL
        VLAALII FFTVVFWLLNICTFVFVSRQM L
Subjt:  VLAALIIIFFTVVFWLLNICTFVFVSRQMVL

XP_023553425.1 RNA-binding protein 2-like isoform X4 [Cucurbita pepo subsp. pepo]5.5e-11099.5Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
        MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRS+KISSYGGQSARPVGGGVPGHSINDPPPI
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI

Query:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

TrEMBL top hitse value%identityAlignment
A0A5D3CIZ5 RNA-binding protein 2-like isoform X44.6e-11075.35Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
        MSDAYWRY+DSQQQPPSSVP V GKRPRVDYDT+G H+LPNYYPRQDDRP+LQGIKSVDSINESYERYLR+S+ISSYGGQSARPVGGGVPGH +ND PPI
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI

Query:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGVVSGANVNDRS SFGGGRPN+PLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESR+ GRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  VLAALIIIFFTVVFWLLNICTFVFV------SRQMVLRFQVVWLEECEFVDAILHSTGGKSCCNLLAFLVQGQVVGIVESVELCDFAG
        +L + +         L N+     +      S ++VL+F          +D+  H   G S CNLLAFLVQGQV GIVESVELCDF G
Subjt:  VLAALIIIFFTVVFWLLNICTFVFV------SRQMVLRFQVVWLEECEFVDAILHSTGGKSCCNLLAFLVQGQVVGIVESVELCDFAG

A0A6J1E554 RNA-binding protein 2-like isoform X24.6e-11099.5Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
        MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLP+YYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI

Query:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

A0A6J1E5A5 RNA-binding protein 2-like isoform X44.6e-11099.5Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
        MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLP+YYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI

Query:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

A0A6J1E5U3 RNA-binding protein 2-like isoform X12.5e-12498.7Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
        MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLP+YYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI

Query:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  VLAALIIIFFTVVFWLLNICTFVFVSRQMVL
        VLAALIIIFFTVVFWLLNICTFVFV RQM L
Subjt:  VLAALIIIFFTVVFWLLNICTFVFVSRQMVL

A0A6J1J2D2 RNA-binding protein 2-like isoform X18.6e-10999Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI
        MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYG QSARPVGGGVPGHSINDPPPI
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPI

Query:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRD VVLGFVDFVSPAHAATAMDALQG
Subjt:  VGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A9.1e-3142.92Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYD----TSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPG-----
        M+D YW     Q  PP        KRPR D++    T        YYPR +D      +    +I  +Y+RYL+S +    G  S    GGG  G     
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYD----TSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPG-----

Query:  HSINDPPPIVGIGGVVS-GANVNDRSASFGGGRP--NVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSP
         +I+D   ++  GGV+      N  +  F    P     LP DASNTL+VEGLPS+C+RRE+AHIFRPFVGY+EVRLV K+S++   DP+VL FVDF +P
Subjt:  HSINDPPPIVGIGGVVS-GANVNDRSASFGGGRP--NVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSP

Query:  AHAATAMDALQG
        A AATA+ ALQG
Subjt:  AHAATAMDALQG

F4HWF9 Nuclear speckle RNA-binding protein B1.7e-2943.89Show/hide
Query:  DLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGG----------GVPGHSINDPPPIVGIGG-VVSGANVNDRSASFG------
        D+ +Y  + +DR I   +K   SI  +Y+RYL+S +      + A P  G           +PG S+ +   + G GG + S    N R   FG      
Subjt:  DLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGG----------GVPGHSINDPPPIVGIGG-VVSGANVNDRSASFG------

Query:  -GGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ
          GR   PLPPD SNTL+VEGLPS+C+RRE++HIFRPFVGY+EVRLV ++S++   DP VL FVDF + A AATA+ ALQ
Subjt:  -GGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ

G7ID19 RNA-binding protein 21.3e-3741.33Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDT-----SGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVG--------G
        M+D +W        PP  +     KRPR +YDT     +  +++ NY  + +   +L   K + S   +Y+R+L+S+ ++S+    A  +G        G
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDT-----SGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVG--------G

Query:  GVPGHSINDPPPIVGIGGVVSGANV--NDRSASFGG----------GRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGR
         +PGHS+ DP  +  + GV  G ++  N R  +FGG          G   +PLP DAS+TL+VEGLPS  T+RE+AHIFRPFVGY+EVRLV KES++ G 
Subjt:  GVPGHSINDPPPIVGIGGVVSGANV--NDRSASFGG----------GRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGR

Query:  DPVVLGFVDFVSPAHAATAMDALQG
        DP++L FVDF +PA AATA+ ALQG
Subjt:  DPVVLGFVDFVSPAHAATAMDALQG

Q6JB11 Protein MATERNALLY EXPRESSED GENE 55.0e-2972.5Show/hide
Query:  GGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        GGRP  PLPPDAS+TL++EGLP++CTRRE++HIFRPFVG++EVRLVNKESR+PG DP VL FVDF +PA A  A++ALQG
Subjt:  GGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG

Q8H0P8 RNA-binding protein 11.4e-3444Show/hide
Query:  MSDAYWRYSDSQQQPPSSVP-SVAGKRPRVDYDTSGPHDLP-----NYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVG--------
        M+D YW    ++QQ  S +P S   KRPR DY+      LP     +Y  R++DR     +K   +I  +Y+RYL+  ++ S+    A  VG        
Subjt:  MSDAYWRYSDSQQQPPSSVP-SVAGKRPRVDYDTSGPHDLP-----NYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVG--------

Query:  GGVPGHSINDPPPIVG-IGGVVSGANVNDRSASFGGGRPNVP----------LPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGR
        GG+P HS++DP  ++G  GG       N R  ++G   P  P          LPPDAS TL++EGLPS CTRRE+AHIFRPFVGY+EVRLV+KE+++ G 
Subjt:  GGVPGHSINDPPPIVG-IGGVVSGANVNDRSASFGGGRPNVP----------LPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGR

Query:  DPVVLGFVDFVSPAHAATAMDALQG
        DP++L FVDF +PA AATA+ ALQG
Subjt:  DPVVLGFVDFVSPAHAATAMDALQG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.2e-3043.89Show/hide
Query:  DLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGG----------GVPGHSINDPPPIVGIGG-VVSGANVNDRSASFG------
        D+ +Y  + +DR I   +K   SI  +Y+RYL+S +      + A P  G           +PG S+ +   + G GG + S    N R   FG      
Subjt:  DLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGG----------GVPGHSINDPPPIVGIGG-VVSGANVNDRSASFG------

Query:  -GGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ
          GR   PLPPD SNTL+VEGLPS+C+RRE++HIFRPFVGY+EVRLV ++S++   DP VL FVDF + A AATA+ ALQ
Subjt:  -GGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ

AT1G21320.2 nucleotide binding;nucleic acid binding8.1e-3542.6Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSV-AGKRPRVDYDTSGPH-----DLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGG-------
        M+D YW      Q P SS P V   KRPR D+  + P+     D+ +Y  + +DR I   +K   SI  +Y+RYL+S +      + A P  G       
Subjt:  MSDAYWRYSDSQQQPPSSVPSV-AGKRPRVDYDTSGPH-----DLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGG-------

Query:  ---GVPGHSINDPPPIVGIGG-VVSGANVNDRSASFG-------GGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRD
            +PG S+ +   + G GG + S    N R   FG        GR   PLPPD SNTL+VEGLPS+C+RRE++HIFRPFVGY+EVRLV ++S++   D
Subjt:  ---GVPGHSINDPPPIVGIGG-VVSGANVNDRSASFG-------GGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRD

Query:  PVVLGFVDFVSPAHAATAMDALQ
        P VL FVDF + A AATA+ ALQ
Subjt:  PVVLGFVDFVSPAHAATAMDALQ

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.4e-3242.92Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYD----TSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPG-----
        M+D YW     Q  PP        KRPR D++    T        YYPR +D      +    +I  +Y+RYL+S +    G  S    GGG  G     
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYD----TSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPG-----

Query:  HSINDPPPIVGIGGVVS-GANVNDRSASFGGGRP--NVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSP
         +I+D   ++  GGV+      N  +  F    P     LP DASNTL+VEGLPS+C+RRE+AHIFRPFVGY+EVRLV K+S++   DP+VL FVDF +P
Subjt:  HSINDPPPIVGIGGVVS-GANVNDRSASFGGGRP--NVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSP

Query:  AHAATAMDALQG
        A AATA+ ALQG
Subjt:  AHAATAMDALQG

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.8e-2741.79Show/hide
Query:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSIN-DPPP
        M+D YW     Q  PP        KRPR D+   G                  G  +V +I++   R          GG    P+  G  GH+I  DPP 
Subjt:  MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSIN-DPPP

Query:  IVGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ
         V                    GR N  LP DASNTL+VEGLPS+C+RRE+AHIFRPFVGY+EVRLV K+S++   DP+VL FVDF +PA AATA+ ALQ
Subjt:  IVGIGGVVSGANVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQ

Query:  G
        G
Subjt:  G

AT2G47580.1 spliceosomal protein U1A2.1e-0635.37Show/hide
Query:  GGGRPNVP-LPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG
        GG +PN+P  P   +N LFV+ LP   T   +  +F  + G+KEVR++  +   PG     + FV+F     +  AM  LQG
Subjt:  GGGRPNVP-LPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGACGCTTATTGGAGGTATAGCGACTCGCAGCAGCAACCTCCGTCGTCGGTTCCTTCCGTCGCCGGGAAGCGCCCTCGCGTCGATTACGATACCAGTGGTCCTCA
CGATTTGCCCAACTATTACCCTCGTCAAGATGATAGACCAATCCTCCAAGGAATTAAAAGCGTTGATTCCATCAATGAGTCCTATGAACGTTACCTGCGCAGCTCGAAAA
TTTCATCTTATGGTGGACAGTCTGCTAGACCCGTTGGTGGGGGAGTTCCTGGTCATTCAATCAATGATCCTCCTCCTATAGTCGGGATTGGGGGTGTGGTTTCAGGGGCC
AATGTTAATGATAGAAGTGCGAGCTTTGGAGGTGGAAGGCCTAACGTACCCCTTCCTCCAGATGCTTCTAATACACTATTTGTTGAAGGCTTGCCTTCCAGCTGTACACG
GCGTGAAATAGCTCATATATTTCGCCCTTTTGTGGGCTACAAAGAAGTGAGACTTGTTAACAAGGAATCCAGAAATCCTGGAAGAGATCCAGTGGTGCTTGGTTTTGTAG
ATTTTGTGAGTCCTGCCCATGCAGCCACGGCAATGGATGCCTTACAAGGTGTGCTTGCAGCTTTAATTATCATTTTCTTTACCGTTGTTTTCTGGCTGTTGAACATTTGC
ACTTTTGTTTTTGTCTCTCGACAGATGGTTCTTAGATTCCAAGTTGTGTGGCTTGAAGAATGTGAGTTTGTCGATGCTATCCTGCATTCGACCGGTGGGAAATCTTGTTG
CAATTTGCTCGCTTTCCTGGTGCAAGGTCAGGTGGTGGGCATCGTGGAAAGCGTTGAATTATGTGATTTCGCAGGATTTGCGCGTACTGTGAAGTTATGA
mRNA sequenceShow/hide mRNA sequence
AGGAAATCCGAATCATTGATGTTGTCTGTCTGTTCCATGAAAGTAAAATTGTGAACTTTGCAAATAATAGAGTCCCACCGCCCCAACCCAACGGCTTCCCAAAGGGAACA
ACCGGGCTGACCTACCTTCAACATTCAAGGGACTCGCTGTTTCATCCTAAATTCACCGCCTTTTTGAAGGAGCATGTCGGACGCTTATTGGAGGTATAGCGACTCGCAGC
AGCAACCTCCGTCGTCGGTTCCTTCCGTCGCCGGGAAGCGCCCTCGCGTCGATTACGATACCAGTGGTCCTCACGATTTGCCCAACTATTACCCTCGTCAAGATGATAGA
CCAATCCTCCAAGGAATTAAAAGCGTTGATTCCATCAATGAGTCCTATGAACGTTACCTGCGCAGCTCGAAAATTTCATCTTATGGTGGACAGTCTGCTAGACCCGTTGG
TGGGGGAGTTCCTGGTCATTCAATCAATGATCCTCCTCCTATAGTCGGGATTGGGGGTGTGGTTTCAGGGGCCAATGTTAATGATAGAAGTGCGAGCTTTGGAGGTGGAA
GGCCTAACGTACCCCTTCCTCCAGATGCTTCTAATACACTATTTGTTGAAGGCTTGCCTTCCAGCTGTACACGGCGTGAAATAGCTCATATATTTCGCCCTTTTGTGGGC
TACAAAGAAGTGAGACTTGTTAACAAGGAATCCAGAAATCCTGGAAGAGATCCAGTGGTGCTTGGTTTTGTAGATTTTGTGAGTCCTGCCCATGCAGCCACGGCAATGGA
TGCCTTACAAGGTGTGCTTGCAGCTTTAATTATCATTTTCTTTACCGTTGTTTTCTGGCTGTTGAACATTTGCACTTTTGTTTTTGTCTCTCGACAGATGGTTCTTAGAT
TCCAAGTTGTGTGGCTTGAAGAATGTGAGTTTGTCGATGCTATCCTGCATTCGACCGGTGGGAAATCTTGTTGCAATTTGCTCGCTTTCCTGGTGCAAGGTCAGGTGGTG
GGCATCGTGGAAAGCGTTGAATTATGTGATTTCGCAGGATTTGCGCGTACTGTGAAGTTATGAATTTGAGGCAATGTGACAGTCGGATATCAAAAACCGGAGCGTATTAG
TTAGGACCGATCGAATTCGTAAACATTAATATGTGTTGGAATCTTGTGATTTGTGGCGTTATTTTATGTTTACAATCTCACTCTGTATTTATGCGTGCTGCTACGAACGT
GTTGTTGAGCTGTGCTGTGGGGATAAATTTTTGCGTTGATCATTATTTTCGACTAAGTGAGAATTTCAGCTCAACAATATCCAGACATGAGTTCAGCGACGAAAAGAAGT
GGGCTTACTTATAGATTACAGTTCATTGTTATTTTCCTTCATTTTTCAATTTAAAACTATGTTCCAAAGCTGTGCATTTTGTCTGAGAAGAGTTTTTCTTTACTGCAATG
TGATCAGGTAGAGAATAAACTGCATTCTCGAGCTGACATGATGCATTGAGTTTGGAGACTACGGAATGCTGTAAATTGGAGTATTCATTTTTTAGATCTTTGGTGGTTTC
GTGCACCATCGCTCTAGACATAGGATTCACAACACTTCTCCGCCCTAGCCCTATATTGGAAATGCTTTCCCTCTGGGCATGTATAGATGCAATTCCAATTGTGGAGTCAC
TACTGAAGGCCAACTGATTAGCCCTATGTTGGGTTTGTCTTTATGATTGCAAGGAGCTTTGGCAATTGCTGCTAAGACTTAAGCTTGGCTTGATATTGATTTGTTGCTTG
TGGCCTTTTCTACTGGTGAGTGATTGGGTTGATTTGGGGCTCGAGAAAAATTGCAACATGATTCTGGTGTACCAGAAATAGACAATGGGAGTGTAAGTAATAGGAACGAA
CTTCATATCAGAGCTTGTTGTTGCTGTTGCTGCTGCTGCTGCAGCATTTATGGTGAGGAAATTTATGCACACAAAACGTGGTTGTCTGTCTCATGAAGAGGACATTTTTC
TGTAACAATGGAGGAAGTCTTTGCTTCCAGCTTAGAGACAGA
Protein sequenceShow/hide protein sequence
MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDSINESYERYLRSSKISSYGGQSARPVGGGVPGHSINDPPPIVGIGGVVSGA
NVNDRSASFGGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVVLGFVDFVSPAHAATAMDALQGVLAALIIIFFTVVFWLLNIC
TFVFVSRQMVLRFQVVWLEECEFVDAILHSTGGKSCCNLLAFLVQGQVVGIVESVELCDFAGFARTVKL