; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15053 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15053
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description3-5 exonuclease
Genome locationCarg_Chr16:265505..267082
RNA-Seq ExpressionCarg15053
SyntenyCarg15053
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR002782 - Mut7-C RNAse domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576641.1 Exonuclease mut-7-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.8e-8798.15Show/hide
Query:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF
        C + VEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF
Subjt:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF

Query:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
        IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
Subjt:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE

KAG7014693.1 hypothetical protein SDJN02_22322, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-91100Show/hide
Query:  MDDKCLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKC
        MDDKCLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKC
Subjt:  MDDKCLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKC

Query:  NGSFIQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
        NGSFIQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
Subjt:  NGSFIQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE

XP_022923062.1 exonuclease mut-7 homolog [Cucurbita moschata]3.8e-8798.15Show/hide
Query:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF
        C + VEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF
Subjt:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF

Query:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
        IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
Subjt:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE

XP_022984501.1 exonuclease mut-7 homolog [Cucurbita maxima]1.9e-8696.91Show/hide
Query:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF
        C + VEGLAKHLRC+GIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNG F
Subjt:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF

Query:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
        IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
Subjt:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE

XP_023553430.1 exonuclease mut-7 homolog [Cucurbita pepo subsp. pepo]2.4e-8696.91Show/hide
Query:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF
        C + VEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNG F
Subjt:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF

Query:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
        IQKPLTTEEAV+AAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
Subjt:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE

TrEMBL top hitse value%identityAlignment
A0A1S3YVX0 exonuclease mut-7 homolog4.5e-7887.65Show/hide
Query:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF
        C + VEGLAKHLRCVGIDAAVP+SKKPDSR+LI+QACKEKRVLLTRDAKLLRH+YLL NQIYRVKSLLKN+QL+E+IETF L+ISEDQLMSRCTKCNG F
Subjt:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF

Query:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
        IQKPLTTEEAV AAKGFQ IP+CLF+KNLEFWQCMDC QLYWEGTQYHNAVQKF+DVCKLNE
Subjt:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE

A0A2Z7ADX1 Putative exonuclease mut-73.5e-7887.65Show/hide
Query:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF
        C + VEGLAKHLRCVG+DAAVP+SK+PD+R+LIDQA KEKRVLLTRDAKLLRHEYL+ NQ+Y+VKSLLKNEQLLEVIETF LKISEDQLMSRCTKCNGSF
Subjt:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF

Query:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
        IQKPLTTEEAV A+KGFQ IP+CLF+KNLEFW+CMDCHQLYWEGTQYHNAVQKFIDVCKLNE
Subjt:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE

A0A6J1CHC8 Werner syndrome ATP-dependent helicase homolog1.6e-8394.44Show/hide
Query:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF
        C + VEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHE+LL NQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNG F
Subjt:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF

Query:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
        IQKPLTTEEAV AAKGFQRIP+CLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLN+
Subjt:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE

A0A6J1E542 exonuclease mut-7 homolog1.8e-8798.15Show/hide
Query:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF
        C + VEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF
Subjt:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF

Query:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
        IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
Subjt:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE

A0A6J1J5F5 exonuclease mut-7 homolog9.1e-8796.91Show/hide
Query:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF
        C + VEGLAKHLRC+GIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNG F
Subjt:  CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSF

Query:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
        IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
Subjt:  IQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G24340.1 3'-5' exonuclease domain-containing protein2.7e-7583.12Show/hide
Query:  LQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQ
        + VEGLAKHLRCVGIDAA+P SKKPDSREL+DQA KE RVLLTRD KLLRH+ L  +QIYRVKSLLKNEQLLEVIETF LKIS +QLMSRCTKCNG FIQ
Subjt:  LQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQ

Query:  KPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
        KPL+ EEA+ AAKGFQRIP+CLF+KNLEFWQCM+CHQLYWEGTQYHNAVQKF++VCKL+E
Subjt:  KPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATAAATGTCTACTCCAGGTTGAAGGTCTGGCAAAACATCTGCGTTGTGTTGGGATTGATGCTGCAGTTCCGTTTTCCAAAAAGCCGGACTCTAGGGAATTAAT
TGATCAAGCATGCAAGGAGAAGAGAGTACTCTTGACCAGGGATGCTAAACTGCTGAGACATGAGTATTTGCTATGCAATCAAATATACAGAGTTAAAAGTCTTCTAAAGA
ACGAGCAGTTACTCGAGGTTATTGAAACTTTCAATTTGAAAATTAGTGAGGATCAGCTGATGTCTAGATGCACCAAATGCAATGGAAGTTTTATTCAAAAGCCGCTTACA
ACGGAGGAGGCTGTGCTGGCAGCAAAGGGGTTCCAAAGAATTCCGGACTGTTTGTTCGACAAGAATTTAGAGTTCTGGCAGTGCATGGACTGTCACCAACTATACTGGGA
GGGGACACAATATCACAATGCAGTCCAGAAGTTCATTGATGTTTGCAAGTTGAATGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGATAAATGTCTACTCCAGGTTGAAGGTCTGGCAAAACATCTGCGTTGTGTTGGGATTGATGCTGCAGTTCCGTTTTCCAAAAAGCCGGACTCTAGGGAATTAAT
TGATCAAGCATGCAAGGAGAAGAGAGTACTCTTGACCAGGGATGCTAAACTGCTGAGACATGAGTATTTGCTATGCAATCAAATATACAGAGTTAAAAGTCTTCTAAAGA
ACGAGCAGTTACTCGAGGTTATTGAAACTTTCAATTTGAAAATTAGTGAGGATCAGCTGATGTCTAGATGCACCAAATGCAATGGAAGTTTTATTCAAAAGCCGCTTACA
ACGGAGGAGGCTGTGCTGGCAGCAAAGGGGTTCCAAAGAATTCCGGACTGTTTGTTCGACAAGAATTTAGAGTTCTGGCAGTGCATGGACTGTCACCAACTATACTGGGA
GGGGACACAATATCACAATGCAGTCCAGAAGTTCATTGATGTTTGCAAGTTGAATGAGTAGGTTAAAATGAATGATCATCATGAACAAAGGATCTAAGCAATTTTCTCTC
CAGCAGTATCTGCCCCTCAGC
Protein sequenceShow/hide protein sequence
MDDKCLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLT
TEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE