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Carg15058 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15058
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEKC/KEOPS complex, subunit Pcc1
Genome locationCarg_Chr16:284703..286286
RNA-Seq ExpressionCarg15058
SyntenyCarg15058
Gene Ontology termsGO:0070525 - tRNA threonylcarbamoyladenosine metabolic process (biological process)
GO:0000408 - EKC/KEOPS complex (cellular component)
InterPro domainsIPR015419 - CTAG/Pcc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576647.1 hypothetical protein SDJN03_24221, partial [Cucurbita argyrosperma subsp. sororia]8.1e-4596.97Show/hide
Query:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        MAPTPS+AS G+PKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
Subjt:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
KAG7014698.1 hypothetical protein SDJN02_22327 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-46100Show/hide
Query:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
Subjt:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
XP_004146228.1 uncharacterized protein LOC101217139 [Cucumis sativus]6.0e-4088.89Show/hide
Query:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        M PT S+ASHG+PKWEFSCD EVDYESEKKASIVYKALVVDKELQPDKVKR M+ SDGKLSIH EAVEARFLRASFSAFVDVLTLATKTIEDFGQ  DF
Subjt:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
XP_023553191.1 uncharacterized protein LOC111810678 [Cucurbita pepo subsp. pepo]9.9e-4392.93Show/hide
Query:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        M PTPS+AS G+P WEFSCD EVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIH EAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
Subjt:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
XP_038895564.1 uncharacterized protein LOC120083771 [Benincasa hispida]5.1e-3986.87Show/hide
Query:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        MAPT S+AS G+ KWEFSCD EVDYESEKKASIVY AL+VDKELQPDKVKR M+VSDGKLSIH EAVEARFLRASFSAFVDVLTLATKT+EDFGQ VDF
Subjt:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
TrEMBL top hitse value%identityAlignment
A0A0A0L7A2 Uncharacterized protein2.9e-4088.89Show/hide
Query:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        M PT S+ASHG+PKWEFSCD EVDYESEKKASIVYKALVVDKELQPDKVKR M+ SDGKLSIH EAVEARFLRASFSAFVDVLTLATKTIEDFGQ  DF
Subjt:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
A0A1S3CTG0 uncharacterized protein LOC1035041468.8e-3781.82Show/hide
Query:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        M PT S+AS G+ KWEFSCD EVDYESEKKASIVY AL+VDKELQPDKVKR M++S+GKLSIH EAVEARFLRASFS+FVDVLTLATKTIEDFG  V+F
Subjt:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
A0A6J1CHJ5 uncharacterized protein LOC1110115644.2e-3986.73Show/hide
Query:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVD
        MAPT S+AS G+ KWEF CD EVDYESEKKASIVY AL VDKELQPDKVKREM VSDGKLS+H EAVEARFLRASFSAFVDVLTLATKTIEDFGQG+D
Subjt:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVD
A0A6J1G2C3 uncharacterized protein LOC1114500287.2e-3985.86Show/hide
Query:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        MAPT S+ S GD KWEFSCD EVD ESEKKASIVY ALVVDKELQPDKVKREMTVSDGKLS+H EAVEARFLRAS+SAF+DVLTLA KTIEDFGQG+DF
Subjt:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
A0A6J1HX84 uncharacterized protein LOC111467483 isoform X21.8e-3784.85Show/hide
Query:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
        MAPT S+ S GD KWEFSCD EVD ESEKKASIVY ALVVDKELQPDKVKR MTVSDGKLS+H EAVEARFLRAS SAF+DVLTLA KTIEDFGQG+DF
Subjt:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53045.1 unknown protein2.3e-2964.21Show/hide
Query:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQ
        MA T    +  D  W+FSC+L+V +ESE+ A I Y +L VDKELQPDKV+R M+VS+ KLS+H EA+EAR LRASFSAFVDVLTLAT+TI++FGQ
Subjt:  MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGACACCTTCCCTCGCTTCTCATGGAGACCCCAAGTGGGAATTCAGCTGTGACCTTGAAGTCGATTATGAGTCAGAGAAGAAGGCTTCAATTGTGTACAAGGC
TTTAGTAGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATACACCTTGAGGCAGTGGAAGCAAGATTTCTGCGAG
CATCATTCAGTGCTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACAAGGAGTGGATTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATTTATTAGTTATTACCTATTTTACCACATAATTTTTAAAACTCTTAACAAATGGGTTGGAATTATTAACCGCTAAGACTGTTCCCACGACGCCGACCGTGCCCAG
TCCGCGAAGTTGATGCGTGGGCCGCACAATGTGAATATCACCGCTTAACCAGGTTATTTGGGGGGAAAATCCGGCGCTTTTCAACCAGAATTGAAGCTATGGCTCCGACA
CCTTCCCTCGCTTCTCATGGAGACCCCAAGTGGGAATTCAGCTGTGACCTTGAAGTCGATTATGAGTCAGAGAAGAAGGCTTCAATTGTGTACAAGGCTTTAGTAGTCGA
TAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCTATACACCTTGAGGCAGTGGAAGCAAGATTTCTGCGAGCATCATTCAGTG
CTTTTGTAGACGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACAAGGAGTGGATTTCTGATAGCCTTACATGCCCCTGGCCCTCATATTTCAACTGTCACTT
TATGCTTAAAATAGCTATCATTTTAATTTACTACCTATCTGTAATTTTATCACAATATGATTTGTAGTGGTTTGATCGAGTGTGAAGGTACTCATTCCAACATTGAGATC
TAA
Protein sequenceShow/hide protein sequence
MAPTPSLASHGDPKWEFSCDLEVDYESEKKASIVYKALVVDKELQPDKVKREMTVSDGKLSIHLEAVEARFLRASFSAFVDVLTLATKTIEDFGQGVDF