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Carg15128 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15128
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L36
Genome locationCarg_Chr16:649859..651309
RNA-Seq ExpressionCarg15128
SyntenyCarg15128
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000509 - Ribosomal protein L36e
IPR038097 - Ribosomal protein L36e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574185.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia]2.5e-5099.1Show/hide
Query:  AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
        AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
Subjt:  AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK

Query:  MRAGGGGEKKK
        MRAGGGGEKKK
Subjt:  MRAGGGGEKKK

KAG6576718.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia]6.5e-51100Show/hide
Query:  AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
        AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
Subjt:  AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK

Query:  MRAGGGGEKKK
        MRAGGGGEKKK
Subjt:  MRAGGGGEKKK

KAG7013242.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-5099.1Show/hide
Query:  AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
        AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
Subjt:  AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK

Query:  MRAGGGGEKKK
        MRAGGGGEKKK
Subjt:  MRAGGGGEKKK

KAG7014765.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-51100Show/hide
Query:  AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
        AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
Subjt:  AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK

Query:  MRAGGGGEKKK
        MRAGGGGEKKK
Subjt:  MRAGGGGEKKK

XP_022923053.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata]1.9e-50100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

TrEMBL top hitse value%identityAlignment
A0A6J1E5T2 60S ribosomal protein L369.2e-51100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1H2C5 60S ribosomal protein L363.5e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1HV53 60S ribosomal protein L361.3e-4998.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPK PNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1JC29 60S ribosomal protein L369.2e-51100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1K6N3 60S ribosomal protein L363.5e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-11.2e-3982.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--

Query:  -GEKK
          EKK
Subjt:  -GEKK

P52866 60S ribosomal protein L364.4e-3483.52Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKR  FVRNLIREVAGF PYEKRITELLKVGKDKRALKV + K+G H +  K+ E
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE

Q9LRB8 60S ribosomal protein L361.6e-2871.88Show/hide
Query:  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGE
        VGLNKGH VTKK   PRPS RKG  S+RV  VR ++REVAG+APYE+R+ ELLKVGKDKRALK+ KRKLGTH R KKKREEM+ VLRKM+A   GE
Subjt:  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGE

Q9LZ57 60S ribosomal protein L36-31.4e-4083.81Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG-
        TGLFVGLNKGH+VTK+E  PRP++RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG G 
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG-

Query:  -EKKK
         EKKK
Subjt:  -EKKK

Q9M352 60S ribosomal protein L36-21.2e-4282.14Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein8.5e-4182.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--

Query:  -GEKK
          EKK
Subjt:  -GEKK

AT3G53740.2 Ribosomal protein L36e family protein8.2e-4482.14Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT3G53740.3 Ribosomal protein L36e family protein8.2e-4482.14Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT3G53740.4 Ribosomal protein L36e family protein8.2e-4482.14Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT5G02450.1 Ribosomal protein L36e family protein1.0e-4183.81Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG-
        TGLFVGLNKGH+VTK+E  PRP++RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG G 
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG-

Query:  -EKKK
         EKKK
Subjt:  -EKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGATGGCTCCGAAGCAGCCGAATACTGGTCTCTTCGTGGGACTTAACAAAGGACACATTGTTACGAAGAAAGAGTTGGCTCCCCGCCCCTCAGATCGTAAAGGAAAAAG
TAGCAAAAGAGTTCTCTTCGTGAGGAATTTGATCCGGGAAGTTGCTGGGTTTGCACCATATGAGAAGAGAATCACTGAGCTTCTTAAAGTTGGGAAGGACAAGAGAGCAC
TAAAAGTGGCCAAGAGAAAGTTGGGAACTCACAAGAGAGCAAAGAAGAAGCGAGAGGAGATGTCCAGCGTTCTCCGCAAAATGAGAGCTGGTGGAGGCGGCGAGAAGAAG
AAATGA
mRNA sequenceShow/hide mRNA sequence
GCGATGGCTCCGAAGCAGCCGAATACTGGTCTCTTCGTGGGACTTAACAAAGGACACATTGTTACGAAGAAAGAGTTGGCTCCCCGCCCCTCAGATCGTAAAGGAAAAAG
TAGCAAAAGAGTTCTCTTCGTGAGGAATTTGATCCGGGAAGTTGCTGGGTTTGCACCATATGAGAAGAGAATCACTGAGCTTCTTAAAGTTGGGAAGGACAAGAGAGCAC
TAAAAGTGGCCAAGAGAAAGTTGGGAACTCACAAGAGAGCAAAGAAGAAGCGAGAGGAGATGTCCAGCGTTCTCCGCAAAATGAGAGCTGGTGGAGGCGGCGAGAAGAAG
AAATGAAACTTGTGTGGTTAATTTTGAGGCTTCAAGTTCCATTTTGTTAGAGACACGTTCTAGATTGTTATTGTTGTTACCCAGAATGAAATTCAGTGCATTTTTTAACC
TTGTGTTAGGTGAACTATGACAGGTATTAGAACGTAAATTTTTAATTTCTTCAAGTCTTCTTTTTTTAATGAACTCTATAGCCATTTGTATCCCTTTTGATACATTTTCA
TTAGCTTGGAAGGAATGCAGCGTTTCATTAGCTTGAAATTATTGTACATGTGATTTTCTGACCGAAGGCACATGCTAAACACAGGCATTAGTTGATTTTCTAATAGGAAT
TGAATGTTGGAAGCTGAGAGATCTAAATTTAAGTGGTAGCTTAAGTTCAAATTTGTGCAATCTTGATTTTAAAAGATTTTTATATTATTAATAATATA
Protein sequenceShow/hide protein sequence
AMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKK
K