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Carg15132 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15132
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPectin acetylesterase
Genome locationCarg_Chr16:670368..670672
RNA-Seq ExpressionCarg15132
SyntenyCarg15132
Gene Ontology termsGO:0071555 - cell wall organization (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0052793 - pectin acetylesterase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014769.1 hypothetical protein SDJN02_22398, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-26100Show/hide
Query:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGACKRKLAGVSPGQRIRRRRGKLASTVRGE
        MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGACKRKLAGVSPGQRIRRRRGKLASTVRGE
Subjt:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGACKRKLAGVSPGQRIRRRRGKLASTVRGE
XP_022922469.1 pectin acetylesterase 9 [Cucurbita moschata]3.6e-1097.73Show/hide
Query:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
        MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQ+ASSIGA
Subjt:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
XP_022985445.1 pectin acetylesterase 9 [Cucurbita maxima]3.6e-1097.73Show/hide
Query:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
        MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQ+ASSIGA
Subjt:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
XP_023552008.1 pectin acetylesterase 9 [Cucurbita pepo subsp. pepo]3.6e-1097.73Show/hide
Query:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
        MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQ+ASSIGA
Subjt:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
XP_038876641.1 pectin acetylesterase 9 isoform X2 [Benincasa hispida]2.1e-0581.82Show/hide
Query:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
        M+  AVEAPLL L+LLAAALR PLAGARLLVEMTVV++ASSIGA
Subjt:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
TrEMBL top hitse value%identityAlignment
A0A0A0L8Q6 Pectin acetylesterase1.4e-0477.27Show/hide
Query:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
        M+  AVEAPLL+L LLAAAL  PL GARLLVEMTVV++ASSIGA
Subjt:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
A0A1S3AYA0 Pectin acetylesterase1.4e-0477.27Show/hide
Query:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
        M+  AVEAPLL+L LLAAAL  PL GARLLVEMTVV++ASSIGA
Subjt:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
A0A5A7SR39 Pectin acetylesterase1.4e-0477.27Show/hide
Query:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
        M+  AVEAPLL+L LLAAAL  PL GARLLVEMTVV++ASSIGA
Subjt:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
A0A6J1E3G7 Pectin acetylesterase1.7e-1097.73Show/hide
Query:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
        MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQ+ASSIGA
Subjt:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
A0A6J1JBC0 Pectin acetylesterase1.7e-1097.73Show/hide
Query:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
        MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQ+ASSIGA
Subjt:  MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCTGGCCGCCGTCGAAGCTCCATTACTAGTTCTTTTACTTCTTGCTGCAGCGCTGCGGTGGCCGCTCGCCGGAGCGCGGCTCCTAGTGGAGATGACGGTGGTCCA
AAGCGCCTCTTCCATCGGCGCCTGTAAACGGAAGCTTGCCGGCGTATCACCTGGACAGAGGATTCGGCGCCGGCGCGGGAAACTGGCTTCTACAGTTCGAGGTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCTGGCCGCCGTCGAAGCTCCATTACTAGTTCTTTTACTTCTTGCTGCAGCGCTGCGGTGGCCGCTCGCCGGAGCGCGGCTCCTAGTGGAGATGACGGTGGTCCA
AAGCGCCTCTTCCATCGGCGCCTGTAAACGGAAGCTTGCCGGCGTATCACCTGGACAGAGGATTCGGCGCCGGCGCGGGAAACTGGCTTCTACAGTTCGAGGTGAATAA
Protein sequenceShow/hide protein sequence
MNLAAVEAPLLVLLLLAAALRWPLAGARLLVEMTVVQSASSIGACKRKLAGVSPGQRIRRRRGKLASTVRGE