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Carg15141 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15141
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr16:705960..706998
RNA-Seq ExpressionCarg15141
SyntenyCarg15141
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576732.1 hypothetical protein SDJN03_24306, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5798.36Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSIS-GTRMDGRSSRRSRRIPSLPHTSIQDQVV
        MESHVQFS+TKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSIS GTRMDGRSSRRSRRIPSLPHTSIQDQVV
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSIS-GTRMDGRSSRRSRRIPSLPHTSIQDQVV

Query:  PQMEERAVEDEDERDHPMSPVN
        PQMEERAVEDEDERDHPMSPVN
Subjt:  PQMEERAVEDEDERDHPMSPVN

KAG7014778.1 hypothetical protein SDJN02_22407 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-59100Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP

Query:  QMEERAVEDEDERDHPMSPVN
        QMEERAVEDEDERDHPMSPVN
Subjt:  QMEERAVEDEDERDHPMSPVN

XP_022923139.1 uncharacterized protein LOC111430892 isoform X1 [Cucurbita moschata]2.3e-5798.36Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSIS-GTRMDGRSSRRSRRIPSLPHTSIQDQVV
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRL+LDRHLSDTADSTLDSPQKNRKKHSIS GTRMDGRSSRRSRRIPSLPHTSIQDQVV
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSIS-GTRMDGRSSRRSRRIPSLPHTSIQDQVV

Query:  PQMEERAVEDEDERDHPMSPVN
        PQMEERAVEDEDERDHPMSPVN
Subjt:  PQMEERAVEDEDERDHPMSPVN

XP_022923140.1 uncharacterized protein LOC111430892 isoform X2 [Cucurbita moschata]9.2e-5999.17Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRL+LDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP

Query:  QMEERAVEDEDERDHPMSPVN
        QMEERAVEDEDERDHPMSPVN
Subjt:  QMEERAVEDEDERDHPMSPVN

XP_022984701.1 uncharacterized protein LOC111482903 isoform X2 [Cucurbita maxima]2.7e-5898.35Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRN+RRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP

Query:  QMEERAVEDEDERDHPMSPVN
        QMEERAVEDEDERDHP+SPVN
Subjt:  QMEERAVEDEDERDHPMSPVN

TrEMBL top hitse value%identityAlignment
A0A6J1CHV7 uncharacterized protein LOC1110116401.0e-4279.67Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNY-RRRLRLDRHLSDTADSTLDSPQKNRKKHSISG-TRMDGRSSRRSRRIPSLPHTSIQDQV
        MESHVQF+ET   WTNEKHMHFLNSMEASFVRSMF+NR + RRRLRLDRHL DT+DSTLDSPQK+RK H+ SG   +DGRSS RSR   SLPHTS QDQV
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNY-RRRLRLDRHLSDTADSTLDSPQKNRKKHSISG-TRMDGRSSRRSRRIPSLPHTSIQDQV

Query:  VPQMEERAVEDEDERDHPMSPVN
        VPQME+RAVEDEDERDHPMSP+N
Subjt:  VPQMEERAVEDEDERDHPMSPVN

A0A6J1E5I2 uncharacterized protein LOC111430892 isoform X11.1e-5798.36Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSIS-GTRMDGRSSRRSRRIPSLPHTSIQDQVV
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRL+LDRHLSDTADSTLDSPQKNRKKHSIS GTRMDGRSSRRSRRIPSLPHTSIQDQVV
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSIS-GTRMDGRSSRRSRRIPSLPHTSIQDQVV

Query:  PQMEERAVEDEDERDHPMSPVN
        PQMEERAVEDEDERDHPMSPVN
Subjt:  PQMEERAVEDEDERDHPMSPVN

A0A6J1EAV1 uncharacterized protein LOC111430892 isoform X24.5e-5999.17Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRL+LDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP

Query:  QMEERAVEDEDERDHPMSPVN
        QMEERAVEDEDERDHPMSPVN
Subjt:  QMEERAVEDEDERDHPMSPVN

A0A6J1J606 uncharacterized protein LOC111482903 isoform X21.3e-5898.35Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRN+RRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVP

Query:  QMEERAVEDEDERDHPMSPVN
        QMEERAVEDEDERDHP+SPVN
Subjt:  QMEERAVEDEDERDHPMSPVN

A0A6J1JBA6 uncharacterized protein LOC111482903 isoform X13.2e-5797.54Show/hide
Query:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSIS-GTRMDGRSSRRSRRIPSLPHTSIQDQVV
        MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRN+RRRLRLDRHLSDTADSTLDSPQKNRKKHSIS GTRMDGRSSRRSRRIPSLPHTSIQDQVV
Subjt:  MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSIS-GTRMDGRSSRRSRRIPSLPHTSIQDQVV

Query:  PQMEERAVEDEDERDHPMSPVN
        PQMEERAVEDEDERDHP+SPVN
Subjt:  PQMEERAVEDEDERDHPMSPVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGCACGTGCAATTCAGCGAAACGAAGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTGCGATCAATGTTCAAAAA
TCGGAACTATCGCCGCCGTCTACGGCTGGACCGCCACCTGTCGGACACCGCAGACTCAACCCTAGATTCGCCTCAGAAGAACAGAAAAAAGCATTCCATCTCCGGTACCA
GAATGGACGGTAGATCTAGCAGAAGATCAAGACGGATACCATCTCTACCGCACACTTCAATTCAAGATCAGGTGGTCCCACAGATGGAAGAGAGAGCAGTTGAGGATGAA
GATGAGAGAGACCATCCCATGTCACCTGTCAACTAA
mRNA sequenceShow/hide mRNA sequence
AATTCTTCTCCTTCTTCCAACTCCTGTTTGGTTCTTGATTTCGTATACTCCTACCCATGGAGTCGCACGTGCAATTCAGCGAAACGAAGCCGTTTTGGACCAATGAGAAG
CACATGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTGCGATCAATGTTCAAAAATCGGAACTATCGCCGCCGTCTACGGCTGGACCGCCACCTGTCGGACACCGCAGA
CTCAACCCTAGATTCGCCTCAGAAGAACAGAAAAAAGCATTCCATCTCCGGTACCAGAATGGACGGTAGATCTAGCAGAAGATCAAGACGGATACCATCTCTACCGCACA
CTTCAATTCAAGATCAGGTGGTCCCACAGATGGAAGAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCATGTCACCTGTCAACTAA
Protein sequenceShow/hide protein sequence
MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLRLDRHLSDTADSTLDSPQKNRKKHSISGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDE
DERDHPMSPVN