; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15185 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15185
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMAR-binding filament-like protein 1-1 isoform 2
Genome locationCarg_Chr10:1567166..1570558
RNA-Seq ExpressionCarg15185
SyntenyCarg15185
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021562 - Protein of unknown function DUF3007


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589642.1 hypothetical protein SDJN03_15065, partial [Cucurbita argyrosperma subsp. sororia]2.5e-7782.76Show/hide
Query:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK
        RFFCEREGTLSLG+SAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKD+PTNKSE       RK
Subjt:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK

Query:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST
                ++V          FAGYDPMQAGNVVQLVLVLGL      TYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST
Subjt:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST

Query:  SGK
        SGK
Subjt:  SGK

KAG7023331.1 hypothetical protein SDJN02_14356 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-106100Show/hide
Query:  MDKVSHEPIVRCILMNGLRPLQLRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSS
        MDKVSHEPIVRCILMNGLRPLQLRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSS
Subjt:  MDKVSHEPIVRCILMNGLRPLQLRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSS

Query:  SNTSSSKDDPTNKSEARKISVFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST
        SNTSSSKDDPTNKSEARKISVFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST
Subjt:  SNTSSSKDDPTNKSEARKISVFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST

Query:  SGK
        SGK
Subjt:  SGK

XP_004137355.1 uncharacterized protein LOC101203378 [Cucumis sativus]5.7e-6170.44Show/hide
Query:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK
        R F EREGTL LG+SAA  LPQ        ARVYGHFARE  TSR+LSKKE +DFPRKGFF TRKVVLTVP DSSSSNTSSS DD TN++E       RK
Subjt:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK

Query:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST
                ++V          +AGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAEL+ LLEQV+EEKS S 
Subjt:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST

Query:  SGK
        S +
Subjt:  SGK

XP_022921999.1 uncharacterized protein LOC111430086 [Cucurbita moschata]6.1e-7178.05Show/hide
Query:  LRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------A
        + RFFCEREGTLSLG+ AASALPQR       A VYGHFARET TSRQLSK+EVLDFPRKGFFATRKVVLTVP DSSSSNTSSSKDDPT+K E       
Subjt:  LRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------A

Query:  RK--------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSP
        RK        ++V          FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKS 
Subjt:  RK--------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSP

Query:  STSGK
        STSGK
Subjt:  STSGK

XP_038880733.1 uncharacterized protein LOC120072335 [Benincasa hispida]2.9e-6573.4Show/hide
Query:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK
        R FCEREGTL LG+SAA  LPQR       ARVYGHFARE  TSR+LSKKE LDFPRKGFFATRKVVLTVP DSSSSNTS+SK+DPTN+SE       RK
Subjt:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK

Query:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST
                ++V          +AGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAEL+ LLEQV+EEKS S 
Subjt:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST

Query:  SGK
        SG+
Subjt:  SGK

TrEMBL top hitse value%identityAlignment
A0A0A0LPZ9 Uncharacterized protein2.8e-6170.44Show/hide
Query:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK
        R F EREGTL LG+SAA  LPQ        ARVYGHFARE  TSR+LSKKE +DFPRKGFF TRKVVLTVP DSSSSNTSSS DD TN++E       RK
Subjt:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK

Query:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST
                ++V          +AGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAEL+ LLEQV+EEKS S 
Subjt:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST

Query:  SGK
        S +
Subjt:  SGK

A0A1S3BX71 uncharacterized protein LOC1034941946.1e-6170.94Show/hide
Query:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK
        R F EREGTL LG+SAA  LPQ        ARVYG FARE  TSR+LSKKE LDFPRKGFFATRKVVLTVP DSSSSNTSSS +DPTN+SE       RK
Subjt:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK

Query:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST
                ++V          +AGYD MQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAEL+ LLEQV+EEKS S 
Subjt:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST

Query:  SGK
        S +
Subjt:  SGK

A0A6J1E245 uncharacterized protein LOC1114300862.9e-7178.05Show/hide
Query:  LRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------A
        + RFFCEREGTLSLG+ AASALPQR       A VYGHFARET TSRQLSK+EVLDFPRKGFFATRKVVLTVP DSSSSNTSSSKDDPT+K E       
Subjt:  LRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------A

Query:  RK--------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSP
        RK        ++V          FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKS 
Subjt:  RK--------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSP

Query:  STSGK
        STSGK
Subjt:  STSGK

A0A6J1EFX7 uncharacterized protein LOC1114330186.8e-6067.98Show/hide
Query:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK
        R FCEREGTL LG SAA  LPQR       ARVYGHFARE  +S +LSKKE +DFP KGFF T++VV+TVP DSSSSNTSSS+DDPTN+S+       RK
Subjt:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK

Query:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST
                ++V          FAG+DPMQAGNVVQLVLVLGLTL WISTYMFRVS+KDMTYAQQLRDYEDKVM+KRLESLTEAEL+ LLEQV+EEKS S 
Subjt:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST

Query:  SGK
        SG+
Subjt:  SGK

A0A6J1IDW5 uncharacterized protein LOC1114717522.6e-5967.98Show/hide
Query:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK
        R FCEREGTL LG SAA  LPQR       ARVY HFARE  +S++LSKKE +DFP KGFF T+KVVLTVP DSSSSN SSS+DDPTN+S+       RK
Subjt:  RFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDPTNKSE------ARK

Query:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST
                ++V          FAG+DPMQAGNVVQLVLVLGLTL WISTYMFRVS+KDMTYAQQLRDYEDKVM+KRLESLTEAEL+ LLEQV+EEKS S 
Subjt:  --------ISV----------FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPST

Query:  SGK
        SG+
Subjt:  SGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17930.1 unknown protein7.5e-2776.32Show/hide
Query:  FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKS
        + G DP+QAGN VQL+LVLGLTLGWISTY+FRV +K+MTYAQQLRDYE +VMQKRLESL+EAEL  L+ QVDEEK+
Subjt:  FAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGGTGAGCCATGAACCCATCGTCCGTTGTATCCTCATGAACGGGCTTCGGCCACTGCAGCTTCGAAGATTTTTCTGTGAAAGGGAGGGGACCTTGTCTTTAGG
CGTTTCGGCTGCTTCAGCTTTGCCGCAGAGAGCGAGAGTGTACGGACATTTTGCGAGAGTTTACGGACATTTTGCGAGAGAGACAAGAACTAGTCGGCAGTTGTCAAAAA
AGGAAGTTCTTGATTTCCCAAGGAAAGGATTCTTTGCCACAAGGAAAGTTGTCCTCACAGTCCCTTGGGACAGTAGCTCTTCAAACACAAGCAGCAGCAAGGACGATCCT
ACAAATAAATCCGAGGCAAGGAAAATATCGGTCTTTGCGGGGTATGATCCTATGCAAGCAGGTAACGTTGTTCAACTTGTTCTGGTTTTGGGTTTAACGCTTGGATGGAT
TTCCACGTACATGTTCAGAGTTTCAAGCAAGGATATGACATATGCTCAACAACTACGTGACTACGAAGACAAAGTCATGCAGAAACGCCTTGAGAGCCTTACCGAAGCAG
AGCTAATGACATTGCTTGAACAAGTCGACGAAGAAAAGAGCCCATCAACTAGCGGCAAATAG
mRNA sequenceShow/hide mRNA sequence
AATTTATAAGTGAGGTCTCCTGGAAATGGATAAGGTGAGCCATGAACCCATCGTCCGTTGTATCCTCATGAACGGGCTTCGGCCACTGCAGCTTCGAAGATTTTTCTGTG
AAAGGGAGGGGACCTTGTCTTTAGGCGTTTCGGCTGCTTCAGCTTTGCCGCAGAGAGCGAGAGTGTACGGACATTTTGCGAGAGTTTACGGACATTTTGCGAGAGAGACA
AGAACTAGTCGGCAGTTGTCAAAAAAGGAAGTTCTTGATTTCCCAAGGAAAGGATTCTTTGCCACAAGGAAAGTTGTCCTCACAGTCCCTTGGGACAGTAGCTCTTCAAA
CACAAGCAGCAGCAAGGACGATCCTACAAATAAATCCGAGGCAAGGAAAATATCGGTCTTTGCGGGGTATGATCCTATGCAAGCAGGTAACGTTGTTCAACTTGTTCTGG
TTTTGGGTTTAACGCTTGGATGGATTTCCACGTACATGTTCAGAGTTTCAAGCAAGGATATGACATATGCTCAACAACTACGTGACTACGAAGACAAAGTCATGCAGAAA
CGCCTTGAGAGCCTTACCGAAGCAGAGCTAATGACATTGCTTGAACAAGTCGACGAAGAAAAGAGCCCATCAACTAGCGGCAAATAGGTTAAACAAAATTTGGGGCCTTC
GAGCATGGTTGACTCTTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTTACCTGTCTATTGGCACGACTAAGTTTAGGGCGTAGCTCTGATACCATGTTAAACAA
ACACGACTCTCCAAAATGGTATGATATTGTCCACTTTGAGTACAAGCTCTTATGACTTTGATTTAGGCTTCCCCTAAAGGCCTCAGAGTATTCTTTGATTATAAATCCAT
AAACATTCTCTA
Protein sequenceShow/hide protein sequence
MDKVSHEPIVRCILMNGLRPLQLRRFFCEREGTLSLGVSAASALPQRARVYGHFARVYGHFARETRTSRQLSKKEVLDFPRKGFFATRKVVLTVPWDSSSSNTSSSKDDP
TNKSEARKISVFAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELMTLLEQVDEEKSPSTSGK