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Carg15209 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15209
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein 230
Genome locationCarg_Chr10:1693045..1693985
RNA-Seq ExpressionCarg15209
SyntenyCarg15209
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589675.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia]1.5e-49100Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_022921334.1 transmembrane protein 230-like [Cucurbita moschata]1.3e-4899.03Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPG YYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_022987351.1 transmembrane protein 230-like [Cucurbita maxima]4.3e-4999.03Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSIADEDIVMDSPFPVNN+PPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_023516626.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo]2.8e-4898.06Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIAL+VSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPG YYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_038879685.1 transmembrane protein 230 [Benincasa hispida]2.4e-4796.12Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNN+PPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

TrEMBL top hitse value%identityAlignment
A0A0A0LUC1 Transmembrane protein 2301.3e-4693.2Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNN+PPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A1S3BWL2 Transmembrane protein 2304.4e-4794.17Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNN+PPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1E055 Transmembrane protein 2306.1e-4999.03Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPG YYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1I4W8 Transmembrane protein 2302.2e-4693.2Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNN+PPIKEIALAVSLL FGMIGI+VG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1JDX9 Transmembrane protein 2302.1e-4999.03Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSIADEDIVMDSPFPVNN+PPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2301.8e-1046.75Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5R8X3 Transmembrane protein 2301.1e-1046.75Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5ZLH4 Transmembrane protein 2301.1e-1048.05Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALAV L + G   I++GA + +  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q8CIB6 Transmembrane protein 2301.8e-1046.75Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q96A57 Transmembrane protein 2301.8e-1046.75Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)3.5e-4175.73Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI+DED+++ + + V+N+PP+KEI+LAV LLVFG +GIV+G FMA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        P V
Subjt:  PPV

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)8.5e-1144.59Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALAV LL  G + +++  F+    + GD + G    +LG L F+PGFY TRIAYY+++G +G+ F+ IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)2.9e-4379.61Show/hide
Query:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI++++ + VNN+PP+KEIALAV+LLVFG +GIV G FMA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTATGTGGACCATGCGTTTTCGATAGCAGACGAGGACATTGTTATGGATTCTCCGTTCCCCGTCAACAATCAACCTCCTATCAAGGAGATCGCTCTTGCTGTTTC
TCTTCTCGTCTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCT
TGTTTATTCCAGGGTTCTACTACACGCGGATTGCCTACTATGCTTACAAGGGCTACAAGGGCTTCTCCTTTTCCAACATTCCCCCTGTCTAA
mRNA sequenceShow/hide mRNA sequence
GCCTTCCTCCTCACTCCACCTTGCTCGTAGTCAAAAACAGCCAGAGAGCTTTCTCTTCGCTTCTAAAATCAAAAGTCCACCGTCGTCTCCTCCGCCGCTGTCTTCCCCAA
ATCCGATACTCTTTCTCTGCATATCGAAGCTTCAACGCCTTCTTCTTTTTCCAGCTCTTGATCTCCGGTATTACAGAGAAAAATGGCGTATGTGGACCATGCGTTTTCGA
TAGCAGACGAGGACATTGTTATGGATTCTCCGTTCCCCGTCAACAATCAACCTCCTATCAAGGAGATCGCTCTTGCTGTTTCTCTTCTCGTCTTCGGCATGATTGGAATC
GTCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCAGGGTTCTACTACACGCG
GATTGCCTACTATGCTTACAAGGGCTACAAGGGCTTCTCCTTTTCCAACATTCCCCCTGTCTAAATGCTCCAAGTTCCTAACCATTTCTCTACATTTGTACAGATTTTCT
TCTCCAGATTTCTTCATTGTCTACGTTGATTCCACCTTCCCGTTTCCCTTTGACTATTCATTACTCTGTATCCGTTTACTGTCGTTGTCGTTGATAGTTCTTCTGTTTCT
TAAGGCCTATATGTATATAAATTGTTAATTTCAGATCACAATCGAAGCATTTATCTATATAATCTGAAATTTCGCTAATTTTTGCATTTGTTTGTTGATTTGAACACATT
GCGAGTTTATCATGTGAAGAACACAAAGAATTAAATTAGCTTTCCAAATTCTTCAAGTCTCTTGAGGAATTATCTAGCTCTAG
Protein sequenceShow/hide protein sequence
MAYVDHAFSIADEDIVMDSPFPVNNQPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV