CuGenDBv2

Gene ID	Carg15210
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Membrane fusion protein Use1
Genome location	Carg_Chr10:1693854..1698838
RNA-Seq Expression	Carg15210
Synteny	Carg15210
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR019150 - Vesicle transport protein, Use1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6589676.1 hypothetical protein SDJN03_15099, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-110

84.73

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Query:  TGSRTRASDIFLPAAPWREILFVLVVSPFLLPPHADTPISVCLE---------------------------------------RVSKALLGDYAEKIEAI
        TGSRT ASDIFLPAAPWREILF+LVVSPFLL PHADTPISVCLE                                       RVSKALLGDYAEKIEAI
Subjt:  TGSRTRASDIFLPAAPWREILFVLVVSPFLLPPHADTPISVCLE---------------------------------------RVSKALLGDYAEKIEAI

Query:  ASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQ
        ASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQ
Subjt:  ASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQ

Query:  LKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
        LKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Subjt:  LKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

KAG7023356.1 hypothetical protein SDJN02_14381, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-121

100

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Query:  MQRKTTGSRTRASDIFLPAAPWREILFVLVVSPFLLPPHADTPISVCLERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEI
        MQRKTTGSRTRASDIFLPAAPWREILFVLVVSPFLLPPHADTPISVCLERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEI
Subjt:  MQRKTTGSRTRASDIFLPAAPWREILFVLVVSPFLLPPHADTPISVCLERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEI

Query:  NAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTG
        NAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTG
Subjt:  NAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTG

Query:  RVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
        RVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Subjt:  RVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

XP_022921330.1 uncharacterized protein LOC111429634 isoform X2 [Cucurbita moschata]

1.3e-91

96.97

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Query:  ISVCLERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAI
        +S+C  RVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSV EG+INAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAI
Subjt:  ISVCLERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAI

Query:  SHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
        SHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Subjt:  SHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

XP_022987340.1 uncharacterized protein LOC111484922 isoform X1 [Cucurbita maxima]

7.4e-92

98.45

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Query:  LERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE
        + RVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSV EGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE
Subjt:  LERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE

Query:  KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
        KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Subjt:  KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

XP_022987341.1 uncharacterized protein LOC111484922 isoform X2 [Cucurbita maxima]

5.7e-92

97.47

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Query:  ISVCLERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAI
        +S+C  RVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSV EGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAI
Subjt:  ISVCLERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAI

Query:  SHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
        SHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Subjt:  SHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AWP3 uncharacterized protein LOC103483591

4.4e-82

89.18

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Query:  LERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE
        L RVSKALLGDY+EKIEAIASKL VPLPD EESSEPSTSTSV+E SSV EG++N P SP GLRRRF P+SS VEDRSHGTIKEDSSAPVKLDAAAI+HIE
Subjt:  LERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE

Query:  KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
        KHRKLQEDLTDEMVGLA+QLKESSLIMSKSLE+TEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIF MTC+F+MVVLLIRVT
Subjt:  KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

A0A6J1E043 uncharacterized protein LOC111429634 isoform X1

8.0e-92

97.94

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Query:  LERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE
        + RVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSV EG+INAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE
Subjt:  LERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE

Query:  KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
        KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Subjt:  KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

A0A6J1E5C0 uncharacterized protein LOC111429634 isoform X2

6.1e-92

96.97

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Query:  ISVCLERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAI
        +S+C  RVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSV EG+INAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAI
Subjt:  ISVCLERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAI

Query:  SHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
        SHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Subjt:  SHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

A0A6J1JDW8 uncharacterized protein LOC111484922 isoform X2

2.7e-92

97.47

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Query:  ISVCLERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAI
        +S+C  RVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSV EGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAI
Subjt:  ISVCLERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAI

Query:  SHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
        SHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Subjt:  SHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

A0A6J1JGJ9 uncharacterized protein LOC111484922 isoform X1

3.6e-92

98.45

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Query:  LERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE
        + RVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSV EGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE
Subjt:  LERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE

Query:  KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
        KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Subjt:  KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G54110.1 Membrane fusion protein Use1

1.4e-43

54.12

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Query:  LERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE
        L RV+ A + +Y EKIEA+ S++   +P  E S E     S  + S   E +   P+SP  LRRR +P+SS  +++S+     D S P+KLD AA + + 
Subjt:  LERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE

Query:  KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
        K RKLQEDLTDEMV LARQLKE S ++S+S+++TEKILDSTE+A+E SLA+TG    RA +IYSESSKTSCF WL I  MTCVF+MVV+LIRVT
Subjt:  KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

AT3G55600.1 Membrane fusion protein Use1

8.3e-49

59.28

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Query:  LERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE
        L RV+KA + +Y EKIEA+ASK+A   P+ E S EP    S    S   E E  +P SP  LRRR +P+SS  +++S      DSS P+KLD AA +HI+
Subjt:  LERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIE

Query:  KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
        KHRKLQEDLTDEMV LARQLKE S  +S+S+++TEKILDSTE+A+E SLA+TG    RA +IYS+SSKTSCF WL IF M CVF+MVVLLIRVT
Subjt:  KHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAGAGAAAGACGACCGGCAGCCGTACCCGCGCCTCCGATATATTTCTTCCGGCAGCCCCTTGGCGGGAAATTTTATTTGTTCTCGTCGTATCTCCCTTTCTGCTGCC
GCCTCACGCCGACACGCCGATTTCTGTGTGTTTAGAGAGAGTTTCCAAGGCTTTGCTTGGTGATTATGCAGAGAAGATAGAGGCCATTGCTTCAAAATTAGCTGTTCCTT
TGCCTGATGAGGAAGAGTCTTCTGAGCCCTCTACAAGTACTTCTGTTAAAGAATTTTCTTCTGTGACAGAAGGAGAAATAAACGCCCCCCATTCACCTCCGGGGCTAAGG
AGGAGATTTCTGCCTTCTTCCTCTGTTGTGGAGGATAGATCTCATGGGACCATCAAAGAAGACTCGTCAGCACCTGTCAAGTTGGATGCTGCAGCAATATCCCACATCGA
GAAACACAGGAAGCTTCAAGAGGACTTGACCGATGAAATGGTTGGGCTAGCGAGGCAATTGAAAGAGAGCAGTCTGATAATGAGCAAATCTTTGGAAAGCACTGAAAAGA
TACTGGATTCCACAGAGAAGGCCGTTGAGGATAGCTTAGCAACCACCGGTCGGGTCAATAAACGTGCCGTTCAGATTTACTCGGAGAGCTCAAAAACATCATGCTTCACT
TGGTTGGCTATCTTCGTAATGACCTGTGTTTTCGTAATGGTTGTTCTTCTCATTCGAGTTACTTGA

mRNA sequence

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Protein sequence

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MQRKTTGSRTRASDIFLPAAPWREILFVLVVSPFLLPPHADTPISVCLERVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLR
RRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFT
WLAIFVMTCVFVMVVLLIRVT

Carg15210 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome