; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15222 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15222
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionubiquitin carboxyl-terminal hydrolase 36
Genome locationCarg_Chr10:1747318..1747533
RNA-Seq ExpressionCarg15222
SyntenyCarg15222
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589689.1 hypothetical protein SDJN03_15112, partial [Cucurbita argyrosperma subsp. sororia]1.1e-30100Show/hide
Query:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQRNSSFSSSLPPCLNLLPSSNPFPSPNNLPAFSANWFL
        MESLLANYASDDDEERQQHHQPPQQPPSSISKPQRNSSFSSSLPPCLNLLPSSNPFPSPNNLPAFSANWFL
Subjt:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQRNSSFSSSLPPCLNLLPSSNPFPSPNNLPAFSANWFL

TYK28575.1 ubiquitin carboxyl-terminal hydrolase 36 [Cucumis melo var. makuwa]1.3e-0451.85Show/hide
Query:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF
        M+SLLANYAS DDEE + H QPP QPPSSISKP           R+SSFSSSL PP  + L  S   P  ++ P+  A +F
Subjt:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF

XP_004146373.1 proline-rich protein PRCC [Cucumis sativus]2.6e-0551.85Show/hide
Query:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF
        M+SLLANYASDDDEE + H QPP  PPSSIS P           R+SSFSSSL PP  + L  S P P  ++ P+  A +F
Subjt:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF

XP_008453553.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Cucumis melo]1.3e-0451.85Show/hide
Query:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF
        M+SLLANYAS DDEE + H QPP QPPSSISKP           R+SSFSSSL PP  + L  S   P  ++ P+  A +F
Subjt:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF

XP_038878727.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120070904 [Benincasa hispida]1.5e-0567.27Show/hide
Query:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQRN----------SSFSSSLPP
        M+SLLANYAS  DEE +QH QPP QPPSSISKPQR+          SSFSSSLPP
Subjt:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQRN----------SSFSSSLPP

TrEMBL top hitse value%identityAlignment
A0A0A0LUQ8 Uncharacterized protein1.3e-0551.85Show/hide
Query:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF
        M+SLLANYASDDDEE + H QPP  PPSSIS P           R+SSFSSSL PP  + L  S P P  ++ P+  A +F
Subjt:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF

A0A1S3BWI7 ubiquitin carboxyl-terminal hydrolase 366.3e-0551.85Show/hide
Query:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF
        M+SLLANYAS DDEE + H QPP QPPSSISKP           R+SSFSSSL PP  + L  S   P  ++ P+  A +F
Subjt:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF

A0A5A7USS5 Ubiquitin carboxyl-terminal hydrolase 366.3e-0551.85Show/hide
Query:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF
        M+SLLANYAS DDEE + H QPP QPPSSISKP           R+SSFSSSL PP  + L  S   P  ++ P+  A +F
Subjt:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF

A0A5D3DZ12 Ubiquitin carboxyl-terminal hydrolase 366.3e-0551.85Show/hide
Query:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF
        M+SLLANYAS DDEE + H QPP QPPSSISKP           R+SSFSSSL PP  + L  S   P  ++ P+  A +F
Subjt:  MESLLANYASDDDEERQQHHQPPQQPPSSISKPQ----------RNSSFSSSL-PPCLNLLPSSNPFPSPNNLPAFSANWF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCACTGTTAGCCAACTACGCCTCCGACGACGACGAAGAACGGCAGCAGCACCACCAACCGCCGCAGCAGCCACCGTCGTCAATTAGCAAGCCTCAGAGAAACTC
ATCTTTCTCCTCGTCTCTTCCGCCCTGCCTAAATCTTCTTCCCTCTTCCAATCCATTCCCCAGCCCAAACAATCTTCCTGCCTTCTCTGCCAACTGGTTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCACTGTTAGCCAACTACGCCTCCGACGACGACGAAGAACGGCAGCAGCACCACCAACCGCCGCAGCAGCCACCGTCGTCAATTAGCAAGCCTCAGAGAAACTC
ATCTTTCTCCTCGTCTCTTCCGCCCTGCCTAAATCTTCTTCCCTCTTCCAATCCATTCCCCAGCCCAAACAATCTTCCTGCCTTCTCTGCCAACTGGTTTCTTTGA
Protein sequenceShow/hide protein sequence
MESLLANYASDDDEERQQHHQPPQQPPSSISKPQRNSSFSSSLPPCLNLLPSSNPFPSPNNLPAFSANWFL