; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15225 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15225
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCadherin-4 like
Genome locationCarg_Chr10:1761998..1764283
RNA-Seq ExpressionCarg15225
SyntenyCarg15225
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587735.1 hypothetical protein SDJN03_16300, partial [Cucurbita argyrosperma subsp. sororia]4.0e-8287.85Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILS SQSFIS+K+QSAPLKL LLIPSSFVLGHRNRSTRSGK KFIEIDLESSSFGADSEVLAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED
         KPRKVVDLFDKLVEPL+KE SPSLAN+RGWPCLDFFAK SISGATRL PVD++ + SNE+ELEIEVKT T TDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED

KAG6589692.1 hypothetical protein SDJN03_15115, partial [Cucurbita argyrosperma subsp. sororia]2.3e-93100Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED
        TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED

XP_022922028.1 uncharacterized protein LOC111430102 [Cucurbita moschata]6.6e-9399.45Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED
        TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDT+FDASNEVELEIEVKTSTITDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED

XP_022987223.1 uncharacterized protein LOC111484840 [Cucurbita maxima]3.0e-9096.13Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILSQSQSFISSK+QSAPLK+LLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED
        TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFA+GSISGATRL PVDT+FD SNEVE EIEVKTSTITDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED

XP_023515837.1 uncharacterized protein LOC111779884 [Cucurbita pepo subsp. pepo]1.2e-9197.79Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED
        TKPRKVVDLFDK VEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAP+DT+FD SNEVELEIEVKTSTITDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED

TrEMBL top hitse value%identityAlignment
A0A6J1C135 uncharacterized protein LOC1110073002.3e-7579.56Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARIL+ SQS + SK QS+P +L LLIPSSF LGHRNRSTRSGK KFIEIDLESSSFG DS++LAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED
         KPRKVVDLFDKLVEPL+KE SPSLAN+RGWPCL+FFAK SISG+TRLAPVDT+ + +NEVELEI+VK    TDNSNQ E+
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED

A0A6J1E5F5 uncharacterized protein LOC1114301023.2e-9399.45Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED
        TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDT+FDASNEVELEIEVKTSTITDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED

A0A6J1EWU2 uncharacterized protein LOC111438888 isoform X19.6e-8287.29Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILS SQSFIS+K+QSAP KL LLIPSSFVLGHRNRSTRSGK KFIEIDLESSSFGADSEVLAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED
         KPRKVVDLFDKLVEPL+KE SPSLAN+RGWPCLDFFAK SISGATRL PVD++ + SNE+ELEIEVKT T TDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED

A0A6J1IDD9 uncharacterized protein LOC111472830 isoform X14.3e-8287.85Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILS SQSFIS+K+QSAPLKL LLIPSSFVLGHRNRSTRSGK KFIEIDLESSSFGADSEVLAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED
         KPRKVVDLFDKLVEPL+KE SPSLAN+RGWPCLDFFAK SISGATRL PVD + + SNE+ELEIEVKT T TDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED

A0A6J1JIU5 uncharacterized protein LOC1114848401.5e-9096.13Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
        MARILSQSQSFISSK+QSAPLK+LLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRR

Query:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED
        TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFA+GSISGATRL PVDT+FD SNEVE EIEVKTSTITDNSNQPED
Subjt:  TKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16840.2 unknown protein1.3e-1939.86Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--
        MAR  S+S S    +  +A   LL   PSS ++  R++S+   +    EID  ++S      +  I+KL+D V RI V R+ PDW+PFVPG+S+WVPP  
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--

Query:  RRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGS
          ++   +  L  KL  PL+ E S S  +S GWP  D+F KGS
Subjt:  RRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKGS

AT1G16840.3 unknown protein3.9e-1939.44Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--
        MAR  S+S S    +  +A   LL   PSS ++  R++S+   +    EID  ++S      +  I+KL+D V RI V R+ PDW+PFVPG+S+WVPP  
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--

Query:  RRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKG
          ++   +  L  KL  PL+ E S S  +S GWP  D+F KG
Subjt:  RRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKG

AT1G16840.4 unknown protein3.9e-1939.44Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--
        MAR  S+S S    +  +A   LL   PSS ++  R++S+   +    EID  ++S      +  I+KL+D V RI V R+ PDW+PFVPG+S+WVPP  
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--

Query:  RRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKG
          ++   +  L  KL  PL+ E S S  +S GWP  D+F KG
Subjt:  RRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKG

AT1G78890.1 unknown protein1.3e-2241.38Show/hide
Query:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRN-----RSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFW
        MAR LS S S    +  +A     LL+PSS  +  R+     RS  +      EID+ +           + KL+D V RI+V RS PDW+PFVPG+SFW
Subjt:  MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRN-----RSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFW

Query:  VPPRRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKG
        VPP R++   +  L +KL  P+S E S S+++ RGWPC D+F KG
Subjt:  VPPRRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAKG

AT2G19180.1 unknown protein2.2e-2240.88Show/hide
Query:  IEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFF---AKGSISG
        IE++++S +   ++E   ++KL++FV RIIV  STPDW+PF PGSSFWVPP +    K+ +L DK+  PL++E S SL++  GWPC  FF     GS S 
Subjt:  IEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFF---AKGSISG

Query:  ATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED
            A V+ K   +  +E+++      I   S +PED
Subjt:  ATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGAATTTTGTCTCAATCGCAATCTTTCATTTCCTCCAAGATGCAATCTGCGCCTTTGAAGTTATTGCTGTTGATTCCGTCTTCCTTTGTTCTCGGTCATCGGAA
CCGCTCTACACGTTCTGGTAAGGCCAAGTTCATCGAAATTGACCTTGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGATGATTTTGTTG
AGAGGATTATCGTTGAGCGATCGACTCCTGATTGGGTTCCGTTTGTGCCTGGTTCGTCATTTTGGGTTCCTCCTCGTCGTACTAAGCCACGGAAGGTGGTCGACCTGTTC
GATAAATTGGTTGAACCGCTCTCCAAAGAGGTGTCCCCTTCACTTGCTAACTCTCGCGGTTGGCCCTGCTTAGATTTCTTCGCCAAAGGGTCTATATCTGGAGCAACTCG
GCTGGCTCCAGTAGATACCAAGTTCGACGCTTCAAATGAGGTGGAGTTGGAGATCGAGGTGAAGACATCAACAATCACAGATAACTCAAACCAGCCTGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
CAAATAACTCAACAAAAATATGTTTATATATATATATATTTCAGATAAATCAGTATTTTTTTAAAAATTATATTTTTGGGAGTAATAACTCAACTGGAATAAATACTGCG
AAGAGGTCAAGTTCTTATATTTGTCGAACTAAAGGAAAAATTCAGAATACTCATCTTGGAATCTGAAGTTCTTCGGACATCCGTAGCGGTTAGAAAGGAGAGAATTCTTT
GATTTGTAGCCTGGGAATTTCATCTGGGTTCTTCGGATGGCTCGAATTTTGTCTCAATCGCAATCTTTCATTTCCTCCAAGATGCAATCTGCGCCTTTGAAGTTATTGCT
GTTGATTCCGTCTTCCTTTGTTCTCGGTCATCGGAACCGCTCTACACGTTCTGGTAAGGCCAAGTTCATCGAAATTGACCTTGAATCGTCCTCTTTCGGGGCTGATTCAG
AGGTTCTTGCTATTAGGAAGCTGGATGATTTTGTTGAGAGGATTATCGTTGAGCGATCGACTCCTGATTGGGTTCCGTTTGTGCCTGGTTCGTCATTTTGGGTTCCTCCT
CGTCGTACTAAGCCACGGAAGGTGGTCGACCTGTTCGATAAATTGGTTGAACCGCTCTCCAAAGAGGTGTCCCCTTCACTTGCTAACTCTCGCGGTTGGCCCTGCTTAGA
TTTCTTCGCCAAAGGGTCTATATCTGGAGCAACTCGGCTGGCTCCAGTAGATACCAAGTTCGACGCTTCAAATGAGGTGGAGTTGGAGATCGAGGTGAAGACATCAACAA
TCACAGATAACTCAAACCAGCCTGAGGATTGA
Protein sequenceShow/hide protein sequence
MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLF
DKLVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPVDTKFDASNEVELEIEVKTSTITDNSNQPED