| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6589703.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. sororia] | 3.1e-108 | 100 | Show/hide |
Query: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPE
MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPE
Subjt: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPE
Query: DRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGADVSG
DRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGADVSG
Subjt: DRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGADVSG
Query: VRAVTKRQPRQYMNRRGGFNRPLPAERTR
VRAVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt: VRAVTKRQPRQYMNRRGGFNRPLPAERTR
|
|
| XP_004146322.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis sativus] | 5.4e-92 | 88.89 | Show/hide |
Query: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDRED-----RDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSL
MVDRERDRDRGRDRDKDRDRDRY DRERDRD+RERDRRRDRED RDRDRERRR++DDRD ERERGR KRS TP+R RSR RSRTRSPDRHRSRSL
Subjt: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDRED-----RDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSL
Query: SRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAG
SRTPEDR RRRHRSPSPDH RKRHRRDLTADDEK+RQKAVSDFVDGIAKEQHKQKNNKD+VGGGE VEEAMADEDE+EMMKKLGIPVGFDSTKGKPV G
Subjt: SRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAG
Query: ADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR
ADVSGVR VTKRQPRQYMNRRGGFNRPLPAER+R
Subjt: ADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR
|
|
| XP_008453595.1 PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo] | 3.7e-93 | 89.74 | Show/hide |
Query: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDRED-----RDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSL
MVDRERDRDRGRDRDKDRDRDRY DRERDRD+RERDRRRDRED RDRDRERRR+ DDRD ERERGR KRSHTP+R RSR RSRTRSPDRHRSRSL
Subjt: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDRED-----RDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSL
Query: SRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAG
SRTPEDRS RRRHRSPSPDH RKRHRRDLTADDEK+RQKAVSDFVDGIAKEQHKQKNNKD+ G GE VEEAMADEDEIEMMKKLGIPVGFDSTKGKPV G
Subjt: SRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAG
Query: ADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR
ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt: ADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR
|
|
| XP_023007065.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita maxima] | 4.6e-91 | 87.34 | Show/hide |
Query: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPE
MVDRERDRDRGRDRDKDRDRDRY DRERDRD+RERDR DRDR+RERRR++DDRD ERERGR KRSHTP+R RSRHTRSRTRSPD+HR+RSLSR+PE
Subjt: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPE
Query: DRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGADVSG
DRSLRRRHRSPSP+H RKRHRRDLT DD+K+RQK VSDFVDGIAKEQHKQK NKD VGG E VEEA+ADEDEIEMMKKLGIPVGFDSTKGKPV GADVSG
Subjt: DRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGADVSG
Query: VRAVTKRQPRQYMNRRGGFNRPLPAERTR
VRAVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt: VRAVTKRQPRQYMNRRGGFNRPLPAERTR
|
|
| XP_023530476.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo] | 3.5e-91 | 87.34 | Show/hide |
Query: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPE
MVDRERDRDRGRDRDKDRDRDRY DRERDRD+RERDR DRDR+RERRR+++DRD ERERGR KRSHTP+R RSRHTRSRTRSPDRHR+RSLSR+PE
Subjt: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPE
Query: DRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGADVSG
DRSLRRRHRSPSP+H RKRHRRDLT DD+K+RQK VSDFVDGIAKEQHKQK NKD VGG E VEEA+ADEDEIEMMKKLGIPVGFDSTKGKPV GADVSG
Subjt: DRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGADVSG
Query: VRAVTKRQPRQYMNRRGGFNRPLPAERTR
VRAVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt: VRAVTKRQPRQYMNRRGGFNRPLPAERTR
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LU61 SNRNP27 domain-containing protein | 2.6e-92 | 88.89 | Show/hide |
Query: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDRED-----RDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSL
MVDRERDRDRGRDRDKDRDRDRY DRERDRD+RERDRRRDRED RDRDRERRR++DDRD ERERGR KRS TP+R RSR RSRTRSPDRHRSRSL
Subjt: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDRED-----RDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSL
Query: SRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAG
SRTPEDR RRRHRSPSPDH RKRHRRDLTADDEK+RQKAVSDFVDGIAKEQHKQKNNKD+VGGGE VEEAMADEDE+EMMKKLGIPVGFDSTKGKPV G
Subjt: SRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAG
Query: ADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR
ADVSGVR VTKRQPRQYMNRRGGFNRPLPAER+R
Subjt: ADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR
|
|
| A0A1S3BW27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein | 1.8e-93 | 89.74 | Show/hide |
Query: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDRED-----RDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSL
MVDRERDRDRGRDRDKDRDRDRY DRERDRD+RERDRRRDRED RDRDRERRR+ DDRD ERERGR KRSHTP+R RSR RSRTRSPDRHRSRSL
Subjt: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDRED-----RDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSL
Query: SRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAG
SRTPEDRS RRRHRSPSPDH RKRHRRDLTADDEK+RQKAVSDFVDGIAKEQHKQKNNKD+ G GE VEEAMADEDEIEMMKKLGIPVGFDSTKGKPV G
Subjt: SRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAG
Query: ADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR
ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt: ADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR
|
|
| A0A5D3CK71 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein | 1.8e-93 | 89.74 | Show/hide |
Query: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDRED-----RDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSL
MVDRERDRDRGRDRDKDRDRDRY DRERDRD+RERDRRRDRED RDRDRERRR+ DDRD ERERGR KRSHTP+R RSR RSRTRSPDRHRSRSL
Subjt: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDRED-----RDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSL
Query: SRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAG
SRTPEDRS RRRHRSPSPDH RKRHRRDLTADDEK+RQKAVSDFVDGIAKEQHKQKNNKD+ G GE VEEAMADEDEIEMMKKLGIPVGFDSTKGKPV G
Subjt: SRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAG
Query: ADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR
ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt: ADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR
|
|
| A0A6J1EW85 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like | 9.3e-90 | 86.46 | Show/hide |
Query: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPE
MVDRERDRDRGRDRDKDRDRDRY DRERDRD+RER DRDR+RERRR+++DRD ERERGR KRSHTP+R RSRHTRSRTRS DRHR+RSLSR+PE
Subjt: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPE
Query: DRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGADVSG
DRSLRRRHRSPSP+H RKRHRRDLT DD+K+RQK VSDFVDGIAKEQHKQK NKDSVGG E VEEA+ADEDEIEMMKKLGIPVGFDSTKGKPV GADVSG
Subjt: DRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGADVSG
Query: VRAVTKRQPRQYMNRRGGFNRPLPAERTR
VRAVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt: VRAVTKRQPRQYMNRRGGFNRPLPAERTR
|
|
| A0A6J1L1Y6 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like | 2.2e-91 | 87.34 | Show/hide |
Query: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPE
MVDRERDRDRGRDRDKDRDRDRY DRERDRD+RERDR DRDR+RERRR++DDRD ERERGR KRSHTP+R RSRHTRSRTRSPD+HR+RSLSR+PE
Subjt: MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPE
Query: DRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGADVSG
DRSLRRRHRSPSP+H RKRHRRDLT DD+K+RQK VSDFVDGIAKEQHKQK NKD VGG E VEEA+ADEDEIEMMKKLGIPVGFDSTKGKPV GADVSG
Subjt: DRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGADVSG
Query: VRAVTKRQPRQYMNRRGGFNRPLPAERTR
VRAVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt: VRAVTKRQPRQYMNRRGGFNRPLPAERTR
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q6DDA4 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein | 1.6e-06 | 40.96 | Show/hide |
Query: RRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAV
R R R +R RERRR + ERER R +RS + ER RSR+RSP R RSRS RRHRS S R + RRD DD+KD +++
Subjt: RRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAV
Query: SDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGA-DVSGVRAVTKRQPRQYMNRRGGFNRPL
IA E + K E+EIEMMK +G FD++KGK V G+ + + KR+ RQYMNR+GGFNRPL
Subjt: SDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGA-DVSGVRAVTKRQPRQYMNRRGGFNRPL
|
|
| Q6DH74 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein | 8.8e-05 | 38.69 | Show/hide |
Query: RERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPDHVRKRHRRDLT
R R R R+RRR R RDRERRR + +R R+R R RSR+RSP R RSRS RRHRS S +R++ RRD
Subjt: RERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPDHVRKRHRRDLT
Query: ADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGA-DVSGVRAVTKRQPRQYMNRRGGFNRPL
DD KD ++ + V I+ E + K E+EIEMMK +G F+++KGK G+ V KR+ RQYMNR+GGFNRPL
Subjt: ADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGA-DVSGVRAVTKRQPRQYMNRRGGFNRPL
|
|
| Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein | 1.9e-07 | 40.7 | Show/hide |
Query: RERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPDHVRKRHRRDLT
R R R R R+RRR R RDRERRR + R ER+R RSR+RSP R RSRS RRHRS SP R + RR
Subjt: RERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPDHVRKRHRRDLT
Query: ADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGA-DVSGVRAVTKRQPRQYMNRRGGFNRPL
D+EK K + K + +Q +D G E+EIEMMK +G FDSTKGK V G+ + + KR+ RQYMNR+GGFNRPL
Subjt: ADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGA-DVSGVRAVTKRQPRQYMNRRGGFNRPL
|
|
| Q8WVK2 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein | 2.9e-08 | 42.55 | Show/hide |
Query: RRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAV
R R R R RERRR + ERER R +RS + ER R RSR+RSP R RSRS RRHRS SP R + RR D+EK K
Subjt: RRRDREDRDRDRERRREKDDRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPDHVRKRHRRDLTADDEKDRQKAV
Query: SDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGA-DVSGVRAVTKRQPRQYMNRRGGFNRPL
K + +Q +D G E+EIEMMK +G FDSTKGK V G+ + + KR+ RQYMNR+GGFNRPL
Subjt: SDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVAGA-DVSGVRAVTKRQPRQYMNRRGGFNRPL
|
|
| Q9ZR40 Splicing factor U2af large subunit B | 7.5e-04 | 52.58 | Show/hide |
Query: DRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRG-KRSHTPERPRSRHTRSRTRSPDRHRSRSLSRT
DR+RDRDRGRDRD+ RDRD+ +RE+DRD DR RDR DR R++ER R++DD D R R +R H +R RSR+R HRSRS SR+
Subjt: DRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHERERGRG-KRSHTPERPRSRHTRSRTRSPDRHRSRSLSRT
|
|
