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Carg15246 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15246
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF761 domain-containing protein
Genome locationCarg_Chr10:1887857..1888237
RNA-Seq ExpressionCarg15246
SyntenyCarg15246
Gene Ontology termsGO:0071456 - cellular response to hypoxia (biological process)
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589712.1 hypothetical protein SDJN03_15135, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4899.06Show/hide
Query:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
        MAAT+LLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
Subjt:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ

Query:  LRIERQ
        LRIERQ
Subjt:  LRIERQ

KAG7023392.1 hypothetical protein SDJN02_14417, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-60100Show/hide
Query:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
        MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
Subjt:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ

Query:  LRIERQVSLELRYCRGSSSKQLIVSP
        LRIERQVSLELRYCRGSSSKQLIVSP
Subjt:  LRIERQVSLELRYCRGSSSKQLIVSP

XP_022921804.1 uncharacterized protein LOC111429947 [Cucurbita moschata]4.3e-5999.21Show/hide
Query:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
        MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSR GLQRTPSYASEDDVDKRAEAFIANFYRQ
Subjt:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ

Query:  LRIERQVSLELRYCRGSSSKQLIVSP
        LRIERQVSLELRYCRGSSSKQLIVSP
Subjt:  LRIERQVSLELRYCRGSSSKQLIVSP

XP_022987374.1 uncharacterized protein LOC111484948 [Cucurbita maxima]2.8e-5896.83Show/hide
Query:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
        MAATSLLGRLR AVEKLKF+MKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
Subjt:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ

Query:  LRIERQVSLELRYCRGSSSKQLIVSP
        LRIERQVSLEL+YCRG+SSKQLIVSP
Subjt:  LRIERQVSLELRYCRGSSSKQLIVSP

XP_023515447.1 uncharacterized protein LOC111779603 [Cucurbita pepo subsp. pepo]1.5e-5696.83Show/hide
Query:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
        MAATSLLGRLRKAVEKLKF+MKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSR GLQRTPSYASEDDVDKRAEAFIANFYRQ
Subjt:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ

Query:  LRIERQVSLELRYCRGSSSKQLIVSP
        LRIERQVSLELRYCRG+S KQLIVSP
Subjt:  LRIERQVSLELRYCRGSSSKQLIVSP

TrEMBL top hitse value%identityAlignment
A0A0A0LUK4 Uncharacterized protein1.2e-4179.66Show/hide
Query:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
        M A SLLGRLRKAV+K++F+M F+IQ WRLAAMLGRTSSRNLRLSF E PGLK C EDII   E S SSS  GLQRT SYASEDDVD RAEAFIANFYRQ
Subjt:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ

Query:  LRIERQVSLELRYCRGSS
        LRIERQVSLEL+YCRG+S
Subjt:  LRIERQVSLELRYCRGSS

A0A5D3CK96 DUF761 domain-containing protein1.8e-3979.83Show/hide
Query:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLK-VCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYR
        M A SLLGRLRKAV+K+KF+M F+IQ WRLAAMLGRTSSRNLRLSFNE PGLK  C EDII   E  +SSSR GLQRT SYASEDDVD RAEAFIANFYR
Subjt:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLK-VCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYR

Query:  QLRIERQVSLELRYCRGSS
        QLRIERQVSLEL+YCR +S
Subjt:  QLRIERQVSLELRYCRGSS

A0A6J1C4F5 uncharacterized protein LOC1110072902.6e-4173.23Show/hide
Query:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
        MA +SLLGRLRKAV K++F++ F+IQSWRLAAM+GRTSSRNLRLSFNE PGLK C EDI ESS+H +     GLQRT SYASEDDVDKRA+ FIANFYRQ
Subjt:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ

Query:  LRIERQVSLELRYCRGSS-SKQLIVSP
        L+IERQVSLEL+YCRG+S +  L++SP
Subjt:  LRIERQVSLELRYCRGSS-SKQLIVSP

A0A6J1E1K7 uncharacterized protein LOC1114299472.1e-5999.21Show/hide
Query:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
        MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSR GLQRTPSYASEDDVDKRAEAFIANFYRQ
Subjt:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ

Query:  LRIERQVSLELRYCRGSSSKQLIVSP
        LRIERQVSLELRYCRGSSSKQLIVSP
Subjt:  LRIERQVSLELRYCRGSSSKQLIVSP

A0A6J1JIQ4 uncharacterized protein LOC1114849481.4e-5896.83Show/hide
Query:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
        MAATSLLGRLR AVEKLKF+MKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ
Subjt:  MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQ

Query:  LRIERQVSLELRYCRGSSSKQLIVSP
        LRIERQVSLEL+YCRG+SSKQLIVSP
Subjt:  LRIERQVSLELRYCRGSSSKQLIVSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57510.1 unknown protein1.4e-2654.76Show/hide
Query:  SLLGRLRKAVEKLKFVMKFNIQS-WRLAAMLG-RTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSY--ASEDDVDKRAEAFIANFYRQ
        SLL RLR+AV K+KFV+ F I S W L  MLG  +SS +LRLSFN+ PGL        E+   S  SSRG L RT SY  +S++D+D +AE FIANFYRQ
Subjt:  SLLGRLRKAVEKLKFVMKFNIQS-WRLAAMLG-RTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSY--ASEDDVDKRAEAFIANFYRQ

Query:  LRIERQVSLELRYCRGSSSKQLIVSP
        L+IERQ+SLEL+YC+G++      SP
Subjt:  LRIERQVSLELRYCRGSSSKQLIVSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGACTAGCTTGCTGGGTCGGCTGAGGAAGGCGGTGGAGAAGCTGAAATTTGTGATGAAGTTCAACATCCAAAGCTGGCGTTTGGCGGCGATGTTGGGGCGGAC
TTCGTCGAGAAACCTCCGGCTTAGCTTCAACGAAAGCCCGGGGTTGAAGGTCTGTAAAGAGGATATTATAGAGTCGTCTGAACACTCAAATTCTTCATCTCGAGGAGGAC
TACAAAGGACGCCAAGCTACGCTTCTGAAGACGATGTGGACAAGCGAGCGGAGGCTTTTATAGCGAATTTCTATCGCCAGCTTAGGATCGAGCGCCAGGTTTCGCTTGAG
CTTCGATACTGCCGTGGGAGTAGCTCTAAGCAGCTTATAGTTTCTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGACTAGCTTGCTGGGTCGGCTGAGGAAGGCGGTGGAGAAGCTGAAATTTGTGATGAAGTTCAACATCCAAAGCTGGCGTTTGGCGGCGATGTTGGGGCGGAC
TTCGTCGAGAAACCTCCGGCTTAGCTTCAACGAAAGCCCGGGGTTGAAGGTCTGTAAAGAGGATATTATAGAGTCGTCTGAACACTCAAATTCTTCATCTCGAGGAGGAC
TACAAAGGACGCCAAGCTACGCTTCTGAAGACGATGTGGACAAGCGAGCGGAGGCTTTTATAGCGAATTTCTATCGCCAGCTTAGGATCGAGCGCCAGGTTTCGCTTGAG
CTTCGATACTGCCGTGGGAGTAGCTCTAAGCAGCTTATAGTTTCTCCTTGA
Protein sequenceShow/hide protein sequence
MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDIIESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQLRIERQVSLE
LRYCRGSSSKQLIVSP