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Carg15247 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15247
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description4-coumarate--CoA ligase
Genome locationCarg_Chr10:1891976..1897703
RNA-Seq ExpressionCarg15247
SyntenyCarg15247
Gene Ontology termsGO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023393.1 4-coumarate--CoA ligase [Cucurbita argyrosperma subsp. argyrosperma]1.0e-27100Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTRC
        MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTRC
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTRC

XP_022921335.1 4-coumarate--CoA ligase 1-like isoform X1 [Cucurbita moschata]4.7e-09100Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
        MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV

XP_022921336.1 4-coumarate--CoA ligase 1-like isoform X2 [Cucurbita moschata]1.0e-27100Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTRC
        MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTRC
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTRC

XP_022987368.1 4-coumarate--CoA ligase 1-like isoform X3 [Cucurbita maxima]7.2e-2696.88Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTR
        MKDEVAGE PVAFIVRSDGSNITEDEIK+YISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTR
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTR

XP_023515446.1 4-coumarate--CoA ligase 1-like isoform X3 [Cucurbita pepo subsp. pepo]1.1e-26100Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTR
        MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTR
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTR

TrEMBL top hitse value%identityAlignment
A0A6J1E068 4-coumarate--CoA ligase 1-like isoform X36.6e-09100Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQ
        MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQ
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQ

A0A6J1E138 4-coumarate--CoA ligase 1-like isoform X24.9e-28100Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTRC
        MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTRC
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTRC

A0A6J1E5C5 4-coumarate--CoA ligase 1-like isoform X12.3e-09100Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
        MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV

A0A6J1JJ94 4-coumarate--CoA ligase 1-like isoform X33.5e-2696.88Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTR
        MKDEVAGE PVAFIVRSDGSNITEDEIK+YISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTR
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTR

A0A6J1KWS4 4-coumarate--CoA ligase 2-like isoform X21.1e-0880Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSV
        MK+EVAGEVPVAFIVRS GSNITEDEIKQYISKQ   QT   N+V
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSV

SwissProt top hitse value%identityAlignment
I3PB37 4-coumarate:CoA ligase 11.1e-0877.14Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
        MKDE AGEVPVAF+VRS+GS+ITEDE+K ++SKQV
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV

M4ISH0 4-coumarate--CoA ligase CCL12.9e-0982.86Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
        MKDE AGEVPVAF+VRS+GS ITE++IKQYISKQV
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV

O24145 4-coumarate--CoA ligase 11.9e-0880Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
        MKDE AGEVPVAF+VRS+GS ITEDE+K +ISKQV
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV

O24146 4-coumarate--CoA ligase 21.1e-0880Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
        MKDE AGEVPVAF+VRS+GS ITEDE+K +ISKQV
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV

O24540 4-coumarate--CoA ligase2.2e-0982.86Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
        MKDE AGEVPVAF+V+S+G NITEDEIKQ+ISKQV
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV

Arabidopsis top hitse value%identityAlignment
AT1G51680.1 4-coumarate:CoA ligase 11.2e-0762.86Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
        MK+E AGEVPVAF+V+S  S ++ED++KQ++SKQV
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV

AT1G51680.3 4-coumarate:CoA ligase 12.5e-0854.17Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVL
        MK+E AGEVPVAF+V+S  S ++ED++KQ++SKQV+      N  SVL
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVL

AT1G65060.1 4-coumarate:CoA ligase 31.9e-0869.7Show/hide
Query:  DEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
        DEVAGEVPVAF+VRS+G++ITE+++K+Y++KQV
Subjt:  DEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV

AT3G21230.1 4-coumarate:CoA ligase 51.5e-0868.57Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
        MKDEVA EVPVAF+ RS GS +TED++K Y++KQV
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV

AT3G21240.1 4-coumarate:CoA ligase 25.0e-0977.14Show/hide
Query:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV
        MK+E AGEVPVAF+VRS  SNI+EDEIKQ++SKQV
Subjt:  MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATGAAGTAGCTGGAGAGGTTCCTGTTGCGTTCATTGTCCGGTCAGATGGTTCCAACATCACCGAGGATGAAATTAAGCAATACATCTCCAAACAGGTACAAGA
TCAAACAGATTTCAGTAACTCAGTTAGTGTACTGTGGAAGGGAATTAGTGTCCATTGCAGGCTGCAGACCAAACTGACGAGGTGTTAA
mRNA sequenceShow/hide mRNA sequence
TACTTTTTTTAATTCAGTATGAAAGATGAAGTAGCTGGAGAGGTTCCTGTTGCGTTCATTGTCCGGTCAGATGGTTCCAACATCACCGAGGATGAAATTAAGCAATACAT
CTCCAAACAGGTACAAGATCAAACAGATTTCAGTAACTCAGTTAGTGTACTGTGGAAGGGAATTAGTGTCCATTGCAGGCTGCAGACCAAACTGACGAGGTGTTAAACAC
AGCGGTCTCTGATTCAAAGACATCACCGCAGACACCGCCAAAGCTGCGAGATTATGATCCCCCAATCATCGTCTTAAAGCACATTTGTTTATTTATGGTTGTCGTTGATG
GATCAAATTATTATATTAACAGTCCGAAATAACAGAATTGACTTAATTGCGTCAGGCATTCATTAGTTTATAGAATTTGAGTAAAACCCATGTGCTTGGTTCAGTTTTTT
ATTGAGAAATCATTGATATGGATGAAATGCTTTGAAAGTT
Protein sequenceShow/hide protein sequence
MKDEVAGEVPVAFIVRSDGSNITEDEIKQYISKQVQDQTDFSNSVSVLWKGISVHCRLQTKLTRC