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Carg15248 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15248
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein 7-like
Genome locationCarg_Chr10:1899323..1899748
RNA-Seq ExpressionCarg15248
SyntenyCarg15248
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589714.1 Zinc finger protein 2, partial [Cucurbita argyrosperma subsp. sororia]6.3e-75100Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP
        MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP
Subjt:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP

Query:  PLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL
        PLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL
Subjt:  PLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL

XP_022921390.1 zinc finger protein 7 [Cucurbita moschata]1.0e-7298.58Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP
        MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAP 
Subjt:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP

Query:  PLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL
        PLVIDGGRDQIRAFPADQNLLL HHHHQADDIGHLDLSLRL
Subjt:  PLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL

XP_022987492.1 zinc finger protein 7-like [Cucurbita maxima]1.2e-7399.29Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP
        MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP
Subjt:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP

Query:  PLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL
        PLVIDGGRDQIRAFPADQNLLLH HHHQADDIGHLDLSLRL
Subjt:  PLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL

XP_023003862.1 zinc finger protein 2-like [Cucurbita maxima]2.3e-4571.81Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSS---SAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLT
        MEFKHH QLNL L LEPSS SS   SAPVSP C   RV+ CNYC+RKFYSSQALGGHQNAHKLERTLAKK+RE+RAYRGDHE+ N+ M S+HLWKVET+T
Subjt:  MEFKHHQQLNLELVLEPSSPSS---SAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLT

Query:  APPPLVI-----DGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL
        A  PLVI     DGGR +IR F A+ + L H HHH  DDIGHLDLSLRL
Subjt:  APPPLVI-----DGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL

XP_023516743.1 zinc finger protein 7-like [Cucurbita pepo subsp. pepo]1.0e-7298.59Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP
        MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDH SNNVMMKSSHLWKVETLTAPP
Subjt:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP

Query:  PLVIDGGRDQIRAFPADQNLLLHHHHH-QADDIGHLDLSLRL
        PLVIDGGRDQIRAFPADQNLLLHHHHH QADDIGHLDLSLRL
Subjt:  PLVIDGGRDQIRAFPADQNLLLHHHHH-QADDIGHLDLSLRL

TrEMBL top hitse value%identityAlignment
A0A6J1BYT1 protein LATE FLOWERING6.9e-2759.01Show/hide
Query:  MEFKHHQQLNLELVLEPS--SPSSSAPV------SPNC--EAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMR--AYRGDHESN---NVMM
        MEFK H QLNLELVLEPS  S SSS+ V      +PNC  + ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+R  AY GD   N   N+MM
Subjt:  MEFKHHQQLNLELVLEPS--SPSSSAPV------SPNC--EAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMR--AYRGDHESN---NVMM

Query:  -KSSHLWKVETLTAPPPLVID----GGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL
          S+HLWK+ET    PP VI     GG D   A   D  +      +Q      LDLSLRL
Subjt:  -KSSHLWKVETLTAPPPLVID----GGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL

A0A6J1E5I0 zinc finger protein 74.9e-7398.58Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP
        MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAP 
Subjt:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP

Query:  PLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL
        PLVIDGGRDQIRAFPADQNLLL HHHHQADDIGHLDLSLRL
Subjt:  PLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL

A0A6J1JAI3 zinc finger protein 7-like5.7e-7499.29Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP
        MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP
Subjt:  MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPP

Query:  PLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL
        PLVIDGGRDQIRAFPADQNLLLH HHHQADDIGHLDLSLRL
Subjt:  PLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL

A0A6J1KNT5 zinc finger protein 2-like1.1e-4571.81Show/hide
Query:  MEFKHHQQLNLELVLEPSSPSS---SAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLT
        MEFKHH QLNL L LEPSS SS   SAPVSP C   RV+ CNYC+RKFYSSQALGGHQNAHKLERTLAKK+RE+RAYRGDHE+ N+ M S+HLWKVET+T
Subjt:  MEFKHHQQLNLELVLEPSSPSS---SAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLT

Query:  APPPLVI-----DGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL
        A  PLVI     DGGR +IR F A+ + L H HHH  DDIGHLDLSLRL
Subjt:  APPPLVI-----DGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL

A0A6J5TF83 C2H2-type domain-containing protein7.4e-2150Show/hide
Query:  HQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM-----RAYRGDHE---SNNVMMKSSHLWKVETLT
        + Q+NL+LVLEPS  SSS+ +SP+ E  RVFSCNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE      RA+ G ++    +N    SSH  ++    
Subjt:  HQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM-----RAYRGDHE---SNNVMMKSSHLWKVETLT

Query:  APPPLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL
            L    G      F    N      ++  ++IGHLDLSLRL
Subjt:  APPPLVIDGGRDQIRAFPADQNLLLHHHHHQADDIGHLDLSLRL

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 25.4e-2176.71Show/hide
Query:  FKHHQQLNLELVLEPSSPSSSAPVSPN----CEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM
        +K+H QLNLELVLEPSS SSS+  S N     E  RVFSCNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+
Subjt:  FKHHQQLNLELVLEPSSPSSSAPVSPN----CEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM

Q39262 Zinc finger protein 32.5e-1050.72Show/hide
Query:  HHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRA
        H+    L L+      +S    S      ++FSCNYC+R FYSSQALGGHQNAHK ERTLAK+ + M A
Subjt:  HHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRA

Q39263 Zinc finger protein 43.5e-1260.32Show/hide
Query:  LNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM
        L L    E S+P       P+  + RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK++  M
Subjt:  LNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM

Q39266 Zinc finger protein 76.4e-1453.57Show/hide
Query:  SPNCEA-ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHE------SNNVMMKSSHLWKVETLTAPPPLV
        S  CEA  RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++  M    G H       S+++ M++       TL+ P PLV
Subjt:  SPNCEA-ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHE------SNNVMMKSSHLWKVETLTAPPPLV

Q42485 Zinc finger protein 15.1e-1160.94Show/hide
Query:  QLNLELVLEPSSPSSSAPVSPNCEAA--RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR
        +LNL    + SS S+S       + A  RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK+ +
Subjt:  QLNLELVLEPSSPSSSAPVSPNCEAA--RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 74.6e-1553.57Show/hide
Query:  SPNCEA-ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHE------SNNVMMKSSHLWKVETLTAPPPLV
        S  CEA  RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++  M    G H       S+++ M++       TL+ P PLV
Subjt:  SPNCEA-ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHE------SNNVMMKSSHLWKVETLTAPPPLV

AT1G66140.1 zinc finger protein 42.5e-1360.32Show/hide
Query:  LNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM
        L L    E S+P       P+  + RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK++  M
Subjt:  LNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM

AT1G80730.1 zinc-finger protein 13.6e-1260.94Show/hide
Query:  QLNLELVLEPSSPSSSAPVSPNCEAA--RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR
        +LNL    + SS S+S       + A  RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK+ +
Subjt:  QLNLELVLEPSSPSSSAPVSPNCEAA--RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR

AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein3.6e-1257.58Show/hide
Query:  HQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM
        +Q+LNL   LE    + S   S + E  ++FSCNYC+R FYSSQALGGHQNAHK ERTLAK+ + M
Subjt:  HQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM

AT5G57520.1 zinc finger protein 23.9e-2276.71Show/hide
Query:  FKHHQQLNLELVLEPSSPSSSAPVSPN----CEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM
        +K+H QLNLELVLEPSS SSS+  S N     E  RVFSCNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+
Subjt:  FKHHQQLNLELVLEPSSPSSSAPVSPN----CEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTAAGCACCATCAGCAGCTCAACCTTGAGCTGGTTCTAGAGCCATCTTCGCCTTCCTCTTCAGCTCCTGTGAGTCCAAATTGCGAGGCCGCCAGGGTTTTCTC
GTGTAACTATTGCAAGAGGAAGTTTTATAGCTCGCAGGCGTTGGGAGGTCACCAAAATGCTCATAAGCTGGAGAGGACGTTGGCGAAGAAGAGCAGGGAGATGAGGGCAT
ACCGAGGAGACCATGAAAGCAATAATGTTATGATGAAGTCAAGCCATTTGTGGAAAGTTGAGACTCTAACAGCGCCACCACCTCTAGTAATTGATGGTGGGAGAGATCAG
ATAAGGGCTTTTCCAGCTGATCAAAATCTCCTTCTTCATCATCATCATCATCAAGCTGATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTAAGCACCATCAGCAGCTCAACCTTGAGCTGGTTCTAGAGCCATCTTCGCCTTCCTCTTCAGCTCCTGTGAGTCCAAATTGCGAGGCCGCCAGGGTTTTCTC
GTGTAACTATTGCAAGAGGAAGTTTTATAGCTCGCAGGCGTTGGGAGGTCACCAAAATGCTCATAAGCTGGAGAGGACGTTGGCGAAGAAGAGCAGGGAGATGAGGGCAT
ACCGAGGAGACCATGAAAGCAATAATGTTATGATGAAGTCAAGCCATTTGTGGAAAGTTGAGACTCTAACAGCGCCACCACCTCTAGTAATTGATGGTGGGAGAGATCAG
ATAAGGGCTTTTCCAGCTGATCAAAATCTCCTTCTTCATCATCATCATCATCAAGCTGATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGA
Protein sequenceShow/hide protein sequence
MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQ
IRAFPADQNLLLHHHHHQADDIGHLDLSLRL