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Carg15266 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15266
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSialidase domain-containing protein
Genome locationCarg_Chr10:1976110..1977386
RNA-Seq ExpressionCarg15266
SyntenyCarg15266
Gene Ontology termsNA
InterPro domainsIPR011040 - Sialidase
IPR036278 - Sialidase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059729.1 uncharacterized protein E6C27_scaffold551G00050 [Cucumis melo var. makuwa]2.4e-3388.24Show/hide
Query:  IIFDHAFLSIGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
        +IF++  LSIGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSW DVMTLEDE   EFSYPAVIEASDGS+HITYTYKRKQIK
Subjt:  IIFDHAFLSIGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK

KAG6589734.1 hypothetical protein SDJN03_15157, partial [Cucurbita argyrosperma subsp. sororia]1.2e-48100Show/hide
Query:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIKDSDSNCAHFRMHSNLYKHNRKHSD
        GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIKDSDSNCAHFRMHSNLYKHNRKHSD
Subjt:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIKDSDSNCAHFRMHSNLYKHNRKHSD

KAG7023412.1 hypothetical protein SDJN02_14437, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-86100Show/hide
Query:  MIIFDHAFLSIGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIKDSDSNCAHFRMHSN
        MIIFDHAFLSIGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIKDSDSNCAHFRMHSN
Subjt:  MIIFDHAFLSIGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIKDSDSNCAHFRMHSN

Query:  LYKHNRKHSDASSSALVPFSNRYETPNPPPSLSGSSVLVGTPSRVYPPLGLSLFADISPCVGL
        LYKHNRKHSDASSSALVPFSNRYETPNPPPSLSGSSVLVGTPSRVYPPLGLSLFADISPCVGL
Subjt:  LYKHNRKHSDASSSALVPFSNRYETPNPPPSLSGSSVLVGTPSRVYPPLGLSLFADISPCVGL

XP_022988465.1 uncharacterized protein LOC111485702 isoform X1 [Cucurbita maxima]2.4e-33100Show/hide
Query:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
        GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
Subjt:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK

XP_022988467.1 uncharacterized protein LOC111485702 isoform X2 [Cucurbita maxima]2.4e-33100Show/hide
Query:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
        GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
Subjt:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK

TrEMBL top hitse value%identityAlignment
A0A5A7V1R5 Sialidase domain-containing protein1.1e-3388.24Show/hide
Query:  IIFDHAFLSIGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
        +IF++  LSIGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSW DVMTLEDE   EFSYPAVIEASDGS+HITYTYKRKQIK
Subjt:  IIFDHAFLSIGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK

A0A6J1E060 uncharacterized protein LOC111429641 isoform X11.1e-33100Show/hide
Query:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
        GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
Subjt:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK

A0A6J1E3N6 uncharacterized protein LOC111429641 isoform X21.1e-33100Show/hide
Query:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
        GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
Subjt:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK

A0A6J1JH94 uncharacterized protein LOC111485702 isoform X11.1e-33100Show/hide
Query:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
        GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
Subjt:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK

A0A6J1JMD4 uncharacterized protein LOC111485702 isoform X21.1e-33100Show/hide
Query:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
        GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
Subjt:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57700.1 BNR/Asp-box repeat family protein1.9e-2873.33Show/hide
Query:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
        GIDGVKL+DGRL+L YNT SRGVLK+G+SLDDGDSW D++TLE+  G E+SYPAVI+A DG+VH+TYTY R QIK
Subjt:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK

AT5G57700.2 BNR/Asp-box repeat family protein1.9e-2873.33Show/hide
Query:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
        GIDGVKL+DGRL+L YNT SRGVLK+G+SLDDGDSW D++TLE+  G E+SYPAVI+A DG+VH+TYTY R QIK
Subjt:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK

AT5G57700.3 BNR/Asp-box repeat family protein1.9e-2873.33Show/hide
Query:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
        GIDGVKL+DGRL+L YNT SRGVLK+G+SLDDGDSW D++TLE+  G E+SYPAVI+A DG+VH+TYTY R QIK
Subjt:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK

AT5G57700.4 BNR/Asp-box repeat family protein1.9e-2873.33Show/hide
Query:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK
        GIDGVKL+DGRL+L YNT SRGVLK+G+SLDDGDSW D++TLE+  G E+SYPAVI+A DG+VH+TYTY R QIK
Subjt:  GIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATCTTTGACCATGCATTCTTATCAATAGGTATTGATGGGGTCAAACTGAGGGATGGTCGTTTATTACTTGTTTATAACACCGTCTCGAGGGGCGTGCTTAAGGT
TGGCCTGTCTCTGGATGATGGTGATTCTTGGCTTGATGTTATGACCTTGGAAGACGAGTCAGGAAAGGAATTTTCATATCCGGCGGTGATTGAGGCTAGCGATGGCTCAG
TTCACATCACGTACACATACAAGAGAAAGCAGATTAAGGATTCTGATAGTAACTGCGCCCACTTCAGGATGCACTCTAATCTTTATAAGCATAACAGGAAGCATAGTGAT
GCGTCCTCATCGGCACTTGTTCCCTTCTCCAATCGATATGAGACCCCCAATCCACCCCCCTCCCTTTCGGGGTCCAGCGTCCTTGTTGGCACACCATCTCGTGTCTATCC
CCCTTTGGGGCTCAGCCTCTTCGCTGACATATCGCCTTGTGTCGGGCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCATCTTTGACCATGCATTCTTATCAATAGGTATTGATGGGGTCAAACTGAGGGATGGTCGTTTATTACTTGTTTATAACACCGTCTCGAGGGGCGTGCTTAAGGT
TGGCCTGTCTCTGGATGATGGTGATTCTTGGCTTGATGTTATGACCTTGGAAGACGAGTCAGGAAAGGAATTTTCATATCCGGCGGTGATTGAGGCTAGCGATGGCTCAG
TTCACATCACGTACACATACAAGAGAAAGCAGATTAAGGATTCTGATAGTAACTGCGCCCACTTCAGGATGCACTCTAATCTTTATAAGCATAACAGGAAGCATAGTGAT
GCGTCCTCATCGGCACTTGTTCCCTTCTCCAATCGATATGAGACCCCCAATCCACCCCCCTCCCTTTCGGGGTCCAGCGTCCTTGTTGGCACACCATCTCGTGTCTATCC
CCCTTTGGGGCTCAGCCTCTTCGCTGACATATCGCCTTGTGTCGGGCTCTAG
Protein sequenceShow/hide protein sequence
MIIFDHAFLSIGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDESGKEFSYPAVIEASDGSVHITYTYKRKQIKDSDSNCAHFRMHSNLYKHNRKHSD
ASSSALVPFSNRYETPNPPPSLSGSSVLVGTPSRVYPPLGLSLFADISPCVGL