; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15288 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15288
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA polymerase II transcription factor B subunit 2
Genome locationCarg_Chr03:9110636..9118465
RNA-Seq ExpressionCarg15288
SyntenyCarg15288
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000439 - transcription factor TFIIH core complex (cellular component)
GO:0005675 - transcription factor TFIIH holo complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0001671 - ATPase activator activity (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR004598 - Transcription factor TFIIH subunit p52/Tfb2
IPR040662 - Transcription factor Tfb2, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604444.1 General transcription and DNA repair factor IIH subunit TFB2, partial [Cucurbita argyrosperma subsp. sororia]6.8e-23589.23Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILR                           SLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
Subjt:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV
        WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ     IVTFLQQNAHPRV
Subjt:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
        AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK

KAG7034588.1 RNA polymerase II transcription factor B subunit 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-260100Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  KKRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLSQRDKETPRLTESG
        KKRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLSQRDKETPRLTESG
Subjt:  KKRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLSQRDKETPRLTESG

Query:  FQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSS
        FQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSS
Subjt:  FQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSS

Query:  RKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRVAERIPSVPENVTDQIRLWES
        RKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRVAERIPSVPENVTDQIRLWES
Subjt:  RKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRVAERIPSVPENVTDQIRLWES

Query:  DLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
        DLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
Subjt:  DLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK

XP_022925808.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita moschata]3.7e-23388.82Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPAMKLDQLY NAFICEAILR                           SLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KRETTYKLNPTFQANLQKLLI GEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
Subjt:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV
        WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ     IVTFLQQNAHPRV
Subjt:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
        AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK

XP_022977542.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima]4.4e-23489.03Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILR                           SLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
Subjt:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV
        WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ     IVTFLQQNAHPRV
Subjt:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
        AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK

XP_023543805.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo]6.8e-23589.23Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILR                           SLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
Subjt:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV
        WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ     IVTFLQQNAHPRV
Subjt:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
        AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK

TrEMBL top hitse value%identityAlignment
A0A0A0KK55 RNA polymerase II transcription factor B subunit 28.6e-22886.13Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILR                           SLPPLAKKFVLQMLYID PV+AKSMEEWVLPDGVS
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KRETTY+LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKV
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        FQKGLLSQRDKE PRLTESGFQFLLMETNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+S
Subjt:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV
        WFIPTKLATNLSMSLADSSSRK GFVVVETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q     IVTFLQQNAHPRV
Subjt:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
        AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQK
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK

A0A5A7UBE2 RNA polymerase II transcription factor B subunit 21.4e-21481.84Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILR                           SLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVS
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KRETTY+LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKV
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQ-------------------------RDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLT
        FQKGLLSQ                         RDKE PRLTESGFQFLLMETNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTL+
Subjt:  FQKGLLSQ-------------------------RDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLT

Query:  EEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFK
        +EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFK
Subjt:  EEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFK

Query:  NGITAQQASFLLIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRL
        NGITA+Q     IVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSK LRL
Subjt:  NGITAQQASFLLIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRL

A0A6J1CK16 RNA polymerase II transcription factor B subunit 26.0e-22179.16Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILR                           SLPPLAKKFVLQMLYI+APV AKSMEEWVL DGVS
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KRETTY+LNPTFQANLQKLLI+GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKV
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGE---------------------------------
        FQKGLLSQRDKE PRLTESGFQFLLMETNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGE                                 
Subjt:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGE---------------------------------

Query:  -------AYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNL
               AYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNL
Subjt:  -------AYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNL

Query:  IVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDS
        IVGAITKESLYNAFKNGITA+Q     IVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDS
Subjt:  IVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDS

Query:  KTLRLVVKADIHTHMREHLRRQK
        K +RLVVKAD+HTHMREHLRRQK
Subjt:  KTLRLVVKADIHTHMREHLRRQK

A0A6J1EGA7 RNA polymerase II transcription factor B subunit 21.8e-23388.82Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPAMKLDQLY NAFICEAILR                           SLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KRETTYKLNPTFQANLQKLLI GEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
Subjt:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV
        WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ     IVTFLQQNAHPRV
Subjt:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
        AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK

A0A6J1IIT5 RNA polymerase II transcription factor B subunit 22.1e-23489.03Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILR                           SLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
Subjt:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV
        WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ     IVTFLQQNAHPRV
Subjt:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
        AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK

SwissProt top hitse value%identityAlignment
O70422 General transcription factor IIH subunit 41.0e-6031.52Show/hide
Query:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVSKKRETT--
        +N  + +  L    LD+LY +   C A+ R                            LP LAK +V++ML+++ P+   ++  WV  +    + E+T  
Subjt:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVSKKRETT--

Query:  ------------------YKLNPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLL-
                            LNP F+ NL+  LL  G+  + +           ++  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ 
Subjt:  ------------------YKLNPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLL-

Query:  SQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTK
        S    E P +T +GFQFLL++T AQLWY + +Y+  A+ R +D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+
Subjt:  SQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTK

Query:  LATNLS--MSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRVAERI
        LA NLS  +S A  +  + GF+VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITAQQ     I+ FL+  AHP + ++ 
Subjt:  LATNLS--MSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRVAERI

Query:  PSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
        P +P  +TDQIRLWE + +R+  T    Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  PSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK

P60027 General transcription factor IIH subunit 44.6e-6131.34Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVSKK
        +V +  +N  + +  L    LD+LY +   C A+ R                            LP LAK +V++ML+++ P+   ++  WV  +    +
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVSKK

Query:  RETT--------------------YKLNPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVF
         E+T                      LNP F+ NL+  LL  G+  + +           ++  L+ YA ++WE  L  ++ S  A    +++  +    
Subjt:  RETT--------------------YKLNPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVF

Query:  QKGLL-SQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        Q GL+ S    E P +T +GFQFLL++T AQLWY + +Y+  A+ R +D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK  
Subjt:  QKGLL-SQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLS--MSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHP
         + PT+LA NLS  +S A  +  + GF+VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITAQQ     I+ FL+  AHP
Subjt:  WFIPTKLATNLS--MSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHP

Query:  RVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
         + ++ P +P  +TDQIRLWE + +R+  T    Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  RVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK

P87303 General transcription and DNA repair factor IIH subunit tfb28.5e-5533.08Show/hide
Query:  LPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVSKKRETTYKL--NPTFQANLQKLLIHGE-----VLAREPMPSNITVRLPNLEE---------LEAYA
        LP LA+++V+ ML+   PV     + W+       + E+  KL     FQ + Q + ++ E     + A     ++ +  +P  +E         L+AYA
Subjt:  LPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVSKKRETTYKL--NPTFQANLQKLLIHGE-----VLAREPMPSNITVRLPNLEE---------LEAYA

Query:  LDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYD
         + WE  L  ++ + +A  P      V+ + ++G L    K   R+T +GFQFLL + NAQ+W ++ +Y+  +E+  +DP  ++ FL  L     G AY 
Subjt:  LDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYD

Query:  IDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---MSLADSSSRK---QGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGA
        +D LT+ Q+  ++DL + GLV  Q+      F PT+LAT L+    SL    S     +GF++VETN+R+YAY+SS L   I+ LF+ +  +  NL+VG 
Subjt:  IDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---MSLADSSSRK---QGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGA

Query:  ITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDS
        IT++S+  A  NGI A+Q     I+T+L  +AHP++   +P +P  + DQI LWE + NR+  TP   + +F +   F+ A +YA+E   L+W+ S
Subjt:  ITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDS

Q680U9 General transcription and DNA repair factor IIH subunit TFB25.3e-19070.75Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILR                           SLPPLAKK+VLQMLYID PV A  MEEWVL DG S
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KR T+Y LNPTFQ NLQK +I G VL REPM S+  ++LP+L+ELE YAL QWECFLLQLINSGQ +K + ISSS+MK+
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        FQ+GLLSQRDK+ PRLTESGFQFLLM+TNAQLWYIIREYI NAEERDVDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDS
Subjt:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV
        WFIPTKLATNLS+SLADSS+RK+GFVV+ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT+ Q     I+TFLQQN+HPR 
Subjt:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQ
        A+R+PS+PENVTDQIRLWE+DL R+++T AHFYDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQ

Q92759 General transcription factor IIH subunit 44.6e-6131.34Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVSKK
        +V +  +N  + +  L    LD+LY +   C A+ R                            LP LAK +V++ML+++ P+   ++  WV  +    +
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVSKK

Query:  RETT--------------------YKLNPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVF
         E+T                      LNP F+ NL+  LL  G+  + +           ++  L+ YA ++WE  L  ++ S  A    +++  +    
Subjt:  RETT--------------------YKLNPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVF

Query:  QKGLL-SQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        Q GL+ S    E P +T +GFQFLL++T AQLWY + +Y+  A+ R +D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK  
Subjt:  QKGLL-SQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLS--MSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHP
         + PT+LA NLS  +S A  +  + GF+VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITAQQ     I+ FL+  AHP
Subjt:  WFIPTKLATNLS--MSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHP

Query:  RVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK
         + ++ P +P  +TDQIRLWE + +R+  T    Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  RVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK

Arabidopsis top hitse value%identityAlignment
AT4G17020.1 transcription factor-related3.7e-19170.75Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILR                           SLPPLAKK+VLQMLYID PV A  MEEWVL DG S
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KR T+Y LNPTFQ NLQK +I G VL REPM S+  ++LP+L+ELE YAL QWECFLLQLINSGQ +K + ISSS+MK+
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        FQ+GLLSQRDK+ PRLTESGFQFLLM+TNAQLWYIIREYI NAEERDVDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDS
Subjt:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV
        WFIPTKLATNLS+SLADSS+RK+GFVV+ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT+ Q     I+TFLQQN+HPR 
Subjt:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQ
        A+R+PS+PENVTDQIRLWE+DL R+++T AHFYDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQ

AT4G17020.2 transcription factor-related3.7e-19170.75Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILR                           SLPPLAKK+VLQMLYID PV A  MEEWVL DG S
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KR T+Y LNPTFQ NLQK +I G VL REPM S+  ++LP+L+ELE YAL QWECFLLQLINSGQ +K + ISSS+MK+
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        FQ+GLLSQRDK+ PRLTESGFQFLLM+TNAQLWYIIREYI NAEERDVDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDS
Subjt:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV
        WFIPTKLATNLS+SLADSS+RK+GFVV+ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT+ Q     I+TFLQQN+HPR 
Subjt:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQ
        A+R+PS+PENVTDQIRLWE+DL R+++T AHFYDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQ

AT4G17020.3 transcription factor-related3.7e-19170.75Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILR                           SLPPLAKK+VLQMLYID PV A  MEEWVL DG S
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVS

Query:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV
        K                    KR T+Y LNPTFQ NLQK +I G VL REPM S+  ++LP+L+ELE YAL QWECFLLQLINSGQ +K + ISSS+MK+
Subjt:  K--------------------KRETTYKLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKV

Query:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS
        FQ+GLLSQRDK+ PRLTESGFQFLLM+TNAQLWYIIREYI NAEERDVDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDS
Subjt:  FQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS

Query:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV
        WFIPTKLATNLS+SLADSS+RK+GFVV+ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT+ Q     I+TFLQQN+HPR 
Subjt:  WFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQ
        A+R+PS+PENVTDQIRLWE+DL R+++T AHFYDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAGCTCTATGAGAATGCCTTCATCTGCGAAGCCATTCT
CAGGTCCTTGCTTGCTACTCTAAATGCTTTTATTTTTTTGTTTCGGGTCGTATTAATTACTGAAACGACTAAAACCTTGAGTTTGTCACTTCCACCCCTGGCCAAGAAGT
TTGTTTTACAAATGTTATACATTGATGCTCCAGTAACAGCCAAGTCCATGGAGGAGTGGGTGCTCCCAGATGGAGTCTCGAAGAAAAGAGAAACAACCTACAAGCTAAAT
CCAACGTTCCAAGCTAACCTCCAAAAGCTTTTAATTCATGGTGAAGTTCTCGCCAGAGAACCAATGCCTTCTAATATTACCGTGAGGCTTCCAAATTTGGAAGAACTTGA
GGCTTATGCTCTGGATCAGTGGGAGTGCTTCTTGCTGCAATTGATAAACTCAGGCCAAGCGGATAAGCCCTCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAG
GCCTTTTAAGTCAGAGGGATAAAGAAACTCCACGATTAACTGAGAGCGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATA
TCTAATGCCGAGGAGCGAGATGTTGATCCTGCAGATTTGATTTCTTTTCTGCTGGAGCTTAGTTTTCACGTGACAGGAGAGGCTTATGATATTGATACACTGACAGAAGA
ACAGAGGTATGCTATCAAGGACCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGACAGTTGGTTCATACCTACTAAATTAGCCACGAATCTTTCAATGA
GTTTGGCAGATTCTTCTTCGAGGAAACAGGGATTTGTTGTCGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTACGTCTTTTT
TCGAGGATTGAGTATCAACTTCCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACGGCACAGCAGGCAAGTTTTCTGCT
CATAGTTACTTTTCTACAGCAGAATGCACATCCTCGTGTTGCAGAGAGAATACCATCAGTCCCAGAAAATGTCACGGATCAGATTAGGCTTTGGGAATCGGATCTTAATA
GAGTTGATATAACTCCCGCACATTTTTACGACGAATTCCCTTCCAGGGAAGTTTTCGAGGCTGCTTGCGACTATGCACGAGAATGGAATGGATTGCTATGGGAGGACTCG
AAAACCTTGCGACTGGTAGTGAAGGCAGACATACACACACATATGCGGGAACATCTTCGCCGTCAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAGCTCTATGAGAATGCCTTCATCTGCGAAGCCATTCT
CAGGTCCTTGCTTGCTACTCTAAATGCTTTTATTTTTTTGTTTCGGGTCGTATTAATTACTGAAACGACTAAAACCTTGAGTTTGTCACTTCCACCCCTGGCCAAGAAGT
TTGTTTTACAAATGTTATACATTGATGCTCCAGTAACAGCCAAGTCCATGGAGGAGTGGGTGCTCCCAGATGGAGTCTCGAAGAAAAGAGAAACAACCTACAAGCTAAAT
CCAACGTTCCAAGCTAACCTCCAAAAGCTTTTAATTCATGGTGAAGTTCTCGCCAGAGAACCAATGCCTTCTAATATTACCGTGAGGCTTCCAAATTTGGAAGAACTTGA
GGCTTATGCTCTGGATCAGTGGGAGTGCTTCTTGCTGCAATTGATAAACTCAGGCCAAGCGGATAAGCCCTCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAG
GCCTTTTAAGTCAGAGGGATAAAGAAACTCCACGATTAACTGAGAGCGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATA
TCTAATGCCGAGGAGCGAGATGTTGATCCTGCAGATTTGATTTCTTTTCTGCTGGAGCTTAGTTTTCACGTGACAGGAGAGGCTTATGATATTGATACACTGACAGAAGA
ACAGAGGTATGCTATCAAGGACCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGACAGTTGGTTCATACCTACTAAATTAGCCACGAATCTTTCAATGA
GTTTGGCAGATTCTTCTTCGAGGAAACAGGGATTTGTTGTCGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTACGTCTTTTT
TCGAGGATTGAGTATCAACTTCCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACGGCACAGCAGGCAAGTTTTCTGCT
CATAGTTACTTTTCTACAGCAGAATGCACATCCTCGTGTTGCAGAGAGAATACCATCAGTCCCAGAAAATGTCACGGATCAGATTAGGCTTTGGGAATCGGATCTTAATA
GAGTTGATATAACTCCCGCACATTTTTACGACGAATTCCCTTCCAGGGAAGTTTTCGAGGCTGCTTGCGACTATGCACGAGAATGGAATGGATTGCTATGGGAGGACTCG
AAAACCTTGCGACTGGTAGTGAAGGCAGACATACACACACATATGCGGGAACATCTTCGCCGTCAAAAGTAGATCGTGGATTAGATGATACAATACTGCTACCAATATCT
GTTTATAACCATGGCCGCTGGTACTTCAGTGGCATGTGCTAAAGATTTACTTCATTCAATGAGCAAGGTAAAGAACGCAGTGAGAGTTCTATGGGAGAAAAGAACATTGT
GCCAATGAT
Protein sequenceShow/hide protein sequence
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLLATLNAFIFLFRVVLITETTKTLSLSLPPLAKKFVLQMLYIDAPVTAKSMEEWVLPDGVSKKRETTYKLN
PTFQANLQKLLIHGEVLAREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLSQRDKETPRLTESGFQFLLMETNAQLWYIIREYI
SNAEERDVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLF
SRIEYQLPNLIVGAITKESLYNAFKNGITAQQASFLLIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDS
KTLRLVVKADIHTHMREHLRRQK