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Carg15306 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15306
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box domain-containing protein
Genome locationCarg_Chr03:9199522..9200657
RNA-Seq ExpressionCarg15306
SyntenyCarg15306
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034606.1 hypothetical protein SDJN02_04336 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-46100Show/hide
Query:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLRHFPLFLKTSLYGSFGDSTTKFDDPLNLTSWARLDDRNWRRRAVDHLFGDEQQQIED
        MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLRHFPLFLKTSLYGSFGDSTTKFDDPLNLTSWARLDDRNWRRRAVDHLFGDEQQQIED
Subjt:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLRHFPLFLKTSLYGSFGDSTTKFDDPLNLTSWARLDDRNWRRRAVDHLFGDEQQQIED

KAG8634527.1 hypothetical protein MANES_17G048550v8 [Manihot esculenta]2.4e-0683.33Show/hide
Query:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSL
        MA+EL VLGCTGVV+FLHGANFFFHAL QH  VRSL
Subjt:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSL

PON37879.1 hypothetical protein PanWU01x14_317000 [Parasponia andersonii]2.4e-0677.14Show/hide
Query:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR
        +EL +LGCTG+V+FLHGANFFFHAL QH T+RSLR
Subjt:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR

PON61367.1 hypothetical protein TorRG33x02_281910 [Trema orientale]2.4e-0677.14Show/hide
Query:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR
        +EL +LGCTG+V+FLHGANFFFHAL QH T+RSLR
Subjt:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR

TYI04626.1 hypothetical protein ES332_A10G032800v1 [Gossypium tomentosum]2.4e-0678.38Show/hide
Query:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR
        M +EL VLGCTGVV+FLHGANFFFH L QH  VRSLR
Subjt:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR

TrEMBL top hitse value%identityAlignment
A0A2P5AMV0 Uncharacterized protein1.2e-0677.14Show/hide
Query:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR
        +EL +LGCTG+V+FLHGANFFFHAL QH T+RSLR
Subjt:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR

A0A2P5CJZ9 Uncharacterized protein1.2e-0677.14Show/hide
Query:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR
        +EL +LGCTG+V+FLHGANFFFHAL QH T+RSLR
Subjt:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR

A0A5D2AZA5 Uncharacterized protein5.8e-0677.78Show/hide
Query:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSL
        M +EL VLGCTGVV+FLHGANFFFH L QH  VRSL
Subjt:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSL

A0A5D2NLM3 Uncharacterized protein1.2e-0678.38Show/hide
Query:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR
        M +EL VLGCTGVV+FLHGANFFFH L QH  VRSLR
Subjt:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR

A0A5J5TXY1 Uncharacterized protein5.8e-0677.78Show/hide
Query:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSL
        M +EL VLGCTGVV+FLHGANFFFH L QH  VRSL
Subjt:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGAGCTTCTCGTCTTGGGCTGCACCGGAGTTGTGATCTTCCTTCATGGAGCCAATTTCTTCTTCCACGCTCTCTGGCAGCATTTCACCGTCCGATCTCTCAG
GCATTTCCCTCTGTTTCTGAAGACGTCGCTCTATGGATCTTTCGGCGATTCCACTACCAAATTTGATGATCCACTAAACCTAACTTCTTGGGCGCGATTGGATGATAGAA
ATTGGAGAAGGCGAGCAGTGGATCATTTATTTGGAGATGAACAGCAGCAGATTGAAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATAAGAATGTGAAGGGTGACGTGCCCACCCGATTCATCCTTTTTCACTTTCTTCATCCCCTTCCCCTTCAACAAAAGAAACCCTAAAAGCTGAAGAAATCGGAGTAAAAT
CATTCTATATTCCAATGGCGTTGGAGCTTCTCGTCTTGGGCTGCACCGGAGTTGTGATCTTCCTTCATGGAGCCAATTTCTTCTTCCACGCTCTCTGGCAGCATTTCACC
GTCCGATCTCTCAGGCATTTCCCTCTGTTTCTGAAGACGTCGCTCTATGGATCTTTCGGCGATTCCACTACCAAATTTGATGATCCACTAAACCTAACTTCTTGGGCGCG
ATTGGATGATAGAAATTGGAGAAGGCGAGCAGTGGATCATTTATTTGGAGATGAACAGCAGCAGATTGAAGACTAAAGTATATATCCGACATTGTGATTTAATATGTAAT
CTAGATTTACGCTGTGCTGATGAAGAAGAAGAAATAATCTAATTTACACGATACAGATTAAAATTCTATAGTCTATATAGTTCTTGCCATTCATCAACTTGTTTCTCATA
CTCCATTTCCATGTTTATGATTTCTTGGCTGTAAAGAGGAGTAAATATTACTCAATTTTGCGAAACTGGTTTTGAAAAATGAATTTAATATGAATTGAATTACATGAATA
TCTAAATTCTCATGGCTTTTTTGGTGGAGATCTGAACACCTTAGATGTCTCCTCACTTTGTTCCAGAATTATCCAGAGAAATAGTCTTTAATTAAAAGAAAATTATGGGT
TTGTAGTCTTTAATTAAAAGAAAATTATGGGTTTGTAAATAAAACAAAAGGTGGAGTAAAACTAAAACAAAAGATCGGAGTAAAATTAAAACAAAAGATCGGAGTAAAAC
AAAAAATCGGATCAGAAATAGTCTGAGAATTATCGAGAGAAATAGTCGAGAATTATTGAGGGAAATAGTTATAATTATGGGTAGAAAATTA
Protein sequenceShow/hide protein sequence
MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLRHFPLFLKTSLYGSFGDSTTKFDDPLNLTSWARLDDRNWRRRAVDHLFGDEQQQIED