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Carg15308 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15308
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationCarg_Chr03:9206021..9207642
RNA-Seq ExpressionCarg15308
SyntenyCarg15308
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034608.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-47100Show/hide
Query:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFML
        MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFML
Subjt:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFML

Query:  LSPDFSM
        LSPDFSM
Subjt:  LSPDFSM
XP_022926140.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata]6.9e-4294.23Show/hide
Query:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFML
        MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG++  
Subjt:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFML

Query:  LSPD
        L P+
Subjt:  LSPD
XP_022926141.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata]7.7e-41100Show/hide
Query:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
Subjt:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
XP_022926145.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X5 [Cucurbita moschata]5.9e-4198.97Show/hide
Query:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGT
        MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG+
Subjt:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGT
XP_022978782.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]6.9e-4294.23Show/hide
Query:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFML
        MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG++  
Subjt:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFML

Query:  LSPD
        L P+
Subjt:  LSPD
TrEMBL top hitse value%identityAlignment
A0A6J1EK64 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X13.4e-4294.23Show/hide
Query:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFML
        MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG++  
Subjt:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFML

Query:  LSPD
        L P+
Subjt:  LSPD
A0A6J1EK68 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X52.8e-4198.97Show/hide
Query:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGT
        MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG+
Subjt:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGT
A0A6J1IM12 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X13.4e-4294.23Show/hide
Query:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFML
        MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG++  
Subjt:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFML

Query:  LSPD
        L P+
Subjt:  LSPD
A0A6J1IM18 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X52.8e-4198.97Show/hide
Query:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGT
        MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG+
Subjt:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGT
A0A6J1IR78 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X33.7e-41100Show/hide
Query:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
Subjt:  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial9.5e-1045.26Show/hide
Query:  SSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPF-SIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSE
        +SA    ARS  R+  +R+  +      ++ KS    F +  +++PL      LR+PVE+S CVESLLPYHSATASAL+TS LS+S ++YGW S+
Subjt:  SSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPF-SIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSE
Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein1.4e-1657.61Show/hide
Query:  AARSAFRSTLARATISR-RLTNGAK--VKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        AARS FRS  +RA+ +  R + G K    S  + F +PKQ+PL  ++RI RSPVE+SCCVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSAFRSTLARATISR-RLTNGAK--VKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
AT1G28395.2 unknown protein1.4e-1657.61Show/hide
Query:  AARSAFRSTLARATISR-RLTNGAK--VKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        AARS FRS  +RA+ +  R + G K    S  + F +PKQ+PL  ++RI RSPVE+SCCVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSAFRSTLARATISR-RLTNGAK--VKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
AT1G28395.3 unknown protein1.4e-1657.61Show/hide
Query:  AARSAFRSTLARATISR-RLTNGAK--VKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        AARS FRS  +RA+ +  R + G K    S  + F +PKQ+PL  ++RI RSPVE+SCCVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSAFRSTLARATISR-RLTNGAK--VKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
AT2G33847.1 unknown protein5.7e-1860.47Show/hide
Query:  AARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWT
        AARS FRS + RA ++   +      S  S F +PKQ+PL  SHRI RSPVE+SCCVE++LPYH+ATASALL SMLSVS RS  WT
Subjt:  AARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWT
AT2G33847.2 unknown protein2.3e-1960Show/hide
Query:  AARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGT
        AARS FRS + RA ++   +      S  S F +PKQ+PL  SHRI RSPVE+SCCVE++LPYH+ATASALL SMLSVS RS  WT +GT
Subjt:  AARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGATCAGCCTTCAGATCAACCCTAGCCCGAGCCACTATCTCCCGCAGACTTACCAATGGTGCCAAAGTGAAATCACCCGCATC
TCCGTTCAGCATCCCCAAGCAGAATCCACTCTCCCAGTCCCATCGCATTTTGAGATCTCCTGTTGAAATGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTA
CTGCCTCTGCATTGCTTACGTCTATGCTTTCCGTTTCTCGTCGTAGCTACGGTTGGACTTCTGAAGGTACTTTCATGCTCTTATCGCCGGATTTTTCTATGTAA
mRNA sequenceShow/hide mRNA sequence
AAATTTCCGAATTCCTTTGCTAAATCCCTAGAGCATGTCCTCCGCCGCTGCCATGGCTGCTAGATCAGCCTTCAGATCAACCCTAGCCCGAGCCACTATCTCCCGCAGAC
TTACCAATGGTGCCAAAGTGAAATCACCCGCATCTCCGTTCAGCATCCCCAAGCAGAATCCACTCTCCCAGTCCCATCGCATTTTGAGATCTCCTGTTGAAATGAGTTGC
TGTGTGGAATCGTTGCTTCCTTACCACTCTGCTACTGCCTCTGCATTGCTTACGTCTATGCTTTCCGTTTCTCGTCGTAGCTACGGTTGGACTTCTGAAGGTACTTTCAT
GCTCTTATCGCCGGATTTTTCTATGTAAACATCTGTATTGCTTGTTCGTTCGTTTTTTTAATTAAGTTTTCCTCTTGTCCTGTTTAGCTTTTGCTTTGGGTTGGCGATTC
TACCTTCTTTTAATGGCTAGGTTCTTATGGTTCCCTTATCCCTAATCCAAGGTGGTGGGGGGGTGTTATATCTTAGGTGCATTCAAAATGTGGTTGAGCAGTAAATGTTC
ATTGAGAATTTGAAAGAACAATTTTGTTCGTGTGGCTGGAGAATTTTTAATTTTCATTTTCGTCAACCCATCTTTTACTCTCTTGCGCGATGAAAGAGTGCACATTGCTT
TTCCTTTTGTAGGACAAGACGAGACTATTTGAGGTCTCAGCATGAACGGTGGAATGACTGGATTTATTTTTGTTGTCGACTTTTTGGAAATTGTGGTAAAATATTTCTCG
AGTGGATTGTGTTTGAAAACCATTCTTTTGTGGTGAATCCGAGCTCAGAGATTCAACCTTTTGTTCCTATGACTTTATGGAGTTAGTGGTCAGATTGATGGCTGATGAAA
TTCCAAATAAATTATTGAATTCAGATCTTGTTATTTTGAATCTTTAAGTGGAAAATTTTATTTGTATTCTATTTGTCCATTGGATCCTTAGGGCTTAGACCAATATGATA
TTCTGGTTCCATGTTTATAGTCTAAGAATTAGAATTCACTTGCTATGTTTTATGCTTTTCTTCTCTCAAGGCTCTATGGTCTAAGAATTAGAGCTCAATCTTGTTTATTT
TATTGGGATCATGAATTAATATTAGACCATATTTAGTAGTCAGCTTTGTGATGAAAGTCAGGTTACCTTTGAATTTTCTTTTTCGTTTTGTGTTCATTGATGGCATTAAT
TTTAGTAATATGACAAGGGTGATATTGATTTCTTTTACCACTCAGATTGCAATGATGATGTATGATGAATGTCGGATGGTTCGAGCACTTGCGCTCTAAAGACAAGATGC
TGAAATAAAGTCATGTATTGCTAGTTTTTTCGTGTGCAAGTAGTTCAGTGATATTGGATTTATAGCTATAGGAAGAAACAAACTCATAACTGAGTTCACGTAGGTTGATA
TTCATGTTGGTGAGGCATAATTTTGTTATATTCACCATTCCTAATGACAGTTCACATCCTTGAGTTATCCTTGCTGTATAACTGTTCTTTCTCTTGAAACTTTGGGGACT
TTACTTGAGTTC
Protein sequenceShow/hide protein sequence
MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFMLLSPDFSM