CuGenDBv2

Gene ID	Carg15398
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transcription factor bHLH144
Genome location	Carg_Chr03:9590505..9593528
RNA-Seq Expression	Carg15398
Synteny	Carg15398
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain IPR036638 - Helix-loop-helix DNA-binding domain superfamily IPR037546 - Transcription factor SAC51-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0052558.1 transcription factor bHLH144 [Cucumis melo var. makuwa]

1.1e-131

89.32

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Query:  MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFD
        MYIGITGKR+RAV+E+GKVNMSVGIIAYYQVMQVCQSDLN YLK A  PTA QG DNHMQIPLSSA+ SVLPPGR NLGPFNTVEFQPSEVCPQNFIIFD
Subjt:  MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFD

Query:  HTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSS-
        HTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNF VND H +DREISSPLMEDLDDIDALLSLE+E+HE +DGSED+E+STARSHLNYGNQSPDSSSSS 
Subjt:  HTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSS-

Query:  YSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        YSSKPRKN SFNPVHK SSSG SS  SDMKQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDEVQKLGVGGLEN
Subjt:  YSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

KAG7034698.1 Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma]

2.5e-152

100

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Query:  MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFD
        MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFD
Subjt:  MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFD

Query:  HTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSY
        HTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSY
Subjt:  HTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSY

Query:  SSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        SSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
Subjt:  SSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

XP_022926036.1 transcription factor bHLH144-like [Cucurbita moschata]

8.0e-130

97.6

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Query:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
        M   QSDLNCYLKNAMLPTANQGGDNHMQIPLSSAY SVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
Subjt:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ

Query:  KNFYVNDEHNDD-REISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ
        KNFYVNDEHNDD REISSPLMEDLDDIDALLSL+DEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ
Subjt:  KNFYVNDEHNDD-REISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ

Query:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
Subjt:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

XP_022977790.1 transcription factor bHLH144-like [Cucurbita maxima]

1.9e-123

94.4

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Query:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
        M   QSDLNCYLKN MLPTANQGGDNHMQIPLSSA+ SVLP GRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
Subjt:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ

Query:  KNFYVNDEHNDD-REISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ
        KNFYVNDEHNDD REISSPLMEDLDDIDALLSLEDEDHEDIDG EDEEISTARSHLNYGNQSPD SSSSYSS+PRKN+SFNPVHKLSSSGRSS +SDMKQ
Subjt:  KNFYVNDEHNDD-REISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ

Query:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
Subjt:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

XP_023544178.1 transcription factor bHLH144 [Cucurbita pepo subsp. pepo]

3.0e-129

97.2

Show/hide

Query:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
        M   QSDLNCYLKNAMLPTANQGGDNHMQIPLSSA+ SVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
Subjt:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ

Query:  KNFYVNDEHNDD-REISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ
        KNFYVNDEHNDD REISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKN+SFNPVHKLSSSGRSSRDSDMKQ
Subjt:  KNFYVNDEHNDD-REISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ

Query:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
Subjt:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLX4 BHLH domain-containing protein

1.1e-113

87.6

Show/hide

Query:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
        M   QSDLN YLK A  PTA QG DNHMQIPLSSA+ SVLPPGR NLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPA+ANKLSGPTANMCSKYIQ
Subjt:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ

Query:  KNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSS-YSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ
        KNF VND+H++DREISSPLMEDLDDIDALLSLE+E+HED+DGSED+E+STARSHLNYGNQSPDSSSSS YSSKPRKN SFNPVHK SSSG SS +SD+KQ
Subjt:  KNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSS-YSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ

Query:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        LK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDEVQKLGVGGLEN
Subjt:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

A0A1S3AYV1 transcription factor bHLH144

1.5e-113

88.4

Show/hide

Query:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
        M   QSDLN YLK A  PTA QG DNHMQIPLSSA+ SVLPPGR NLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
Subjt:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ

Query:  KNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSS-YSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ
        KNF VND H +DREISSPLMEDLDDIDALLSLE+E+HE +DGSED+E+STARSHLNYGNQSPDSSSSS YSSKPRKN SFNPVHK SSSG SS  SDMKQ
Subjt:  KNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSS-YSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ

Query:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        LK+KKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
Subjt:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

A0A5A7UBJ4 Transcription factor bHLH144

5.4e-132

89.32

Show/hide

Query:  MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFD
        MYIGITGKR+RAV+E+GKVNMSVGIIAYYQVMQVCQSDLN YLK A  PTA QG DNHMQIPLSSA+ SVLPPGR NLGPFNTVEFQPSEVCPQNFIIFD
Subjt:  MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFD

Query:  HTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSS-
        HTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNF VND H +DREISSPLMEDLDDIDALLSLE+E+HE +DGSED+E+STARSHLNYGNQSPDSSSSS 
Subjt:  HTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSS-

Query:  YSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        YSSKPRKN SFNPVHK SSSG SS  SDMKQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDEVQKLGVGGLEN
Subjt:  YSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

A0A6J1EDR8 transcription factor bHLH144-like

3.8e-130

97.6

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Query:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
        M   QSDLNCYLKNAMLPTANQGGDNHMQIPLSSAY SVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
Subjt:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ

Query:  KNFYVNDEHNDD-REISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ
        KNFYVNDEHNDD REISSPLMEDLDDIDALLSL+DEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ
Subjt:  KNFYVNDEHNDD-REISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ

Query:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
Subjt:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

A0A6J1INB7 transcription factor bHLH144-like

9.2e-124

94.4

Show/hide

Query:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
        M   QSDLNCYLKN MLPTANQGGDNHMQIPLSSA+ SVLP GRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ
Subjt:  MQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQ

Query:  KNFYVNDEHNDD-REISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ
        KNFYVNDEHNDD REISSPLMEDLDDIDALLSLEDEDHEDIDG EDEEISTARSHLNYGNQSPD SSSSYSS+PRKN+SFNPVHKLSSSGRSS +SDMKQ
Subjt:  KNFYVNDEHNDD-REISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQ

Query:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
Subjt:  LKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

SwissProt top hits

e value

%identity

Alignment

Q9ASX9 Transcription factor bHLH144

9.1e-36

43.85

Show/hide

Query:  ANQGGDNHMQIPLS--SAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKL-SGPTANMCSKYIQKNFYVNDEH----NDD
        +++ GD +M  P +  S+Y ++ PP      P++ VE QPS VCP+NF+IFD T +RSQ+M+HP + +KL + P+ N  +   Q N YV   +    N +
Subjt:  ANQGGDNHMQIPLS--SAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKL-SGPTANMCSKYIQKNFYVNDEH----NDD

Query:  REISSPLMEDLDDIDALLSLED--EDHEDIDGSED----EEISTAR-SHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKM
        +E+SS   ED ++IDALLS ++  E+++D +G ED    EE+STAR S  +YGN + +S  SSY      N + +    LS S  SS +    + K+KKM
Subjt:  REISSPLMEDLDDIDALLSLED--EDHEDIDGSED----EEISTAR-SHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKM

Query:  VRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        +  LR I+PGG QM T  VLDEAV+YLKSLK E QKLGVG   N
Subjt:  VRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

Arabidopsis top hits

e value

%identity

Alignment

AT1G29950.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

6.4e-37

43.85

Show/hide

Query:  ANQGGDNHMQIPLS--SAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKL-SGPTANMCSKYIQKNFYVNDEH----NDD
        +++ GD +M  P +  S+Y ++ PP      P++ VE QPS VCP+NF+IFD T +RSQ+M+HP + +KL + P+ N  +   Q N YV   +    N +
Subjt:  ANQGGDNHMQIPLS--SAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKL-SGPTANMCSKYIQKNFYVNDEH----NDD

Query:  REISSPLMEDLDDIDALLSLED--EDHEDIDGSED----EEISTAR-SHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKM
        +E+SS   ED ++IDALLS ++  E+++D +G ED    EE+STAR S  +YGN + +S  SSY      N + +    LS S  SS +    + K+KKM
Subjt:  REISSPLMEDLDDIDALLSLED--EDHEDIDGSED----EEISTAR-SHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKM

Query:  VRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        +  LR I+PGG QM T  VLDEAV+YLKSLK E QKLGVG   N
Subjt:  VRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

AT1G29950.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

6.4e-37

43.85

Show/hide

Query:  ANQGGDNHMQIPLS--SAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKL-SGPTANMCSKYIQKNFYVNDEH----NDD
        +++ GD +M  P +  S+Y ++ PP      P++ VE QPS VCP+NF+IFD T +RSQ+M+HP + +KL + P+ N  +   Q N YV   +    N +
Subjt:  ANQGGDNHMQIPLS--SAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKL-SGPTANMCSKYIQKNFYVNDEH----NDD

Query:  REISSPLMEDLDDIDALLSLED--EDHEDIDGSED----EEISTAR-SHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKM
        +E+SS   ED ++IDALLS ++  E+++D +G ED    EE+STAR S  +YGN + +S  SSY      N + +    LS S  SS +    + K+KKM
Subjt:  REISSPLMEDLDDIDALLSLED--EDHEDIDGSED----EEISTAR-SHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKM

Query:  VRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN
        +  LR I+PGG QM T  VLDEAV+YLKSLK E QKLGVG   N
Subjt:  VRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTACATTGGTATTACGGGAAAGAGAAACAGAGCTGTGAAGGAAGTTGGGAAGGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGTCAGAG
TGACCTCAACTGTTACCTCAAAAACGCGATGCTTCCAACAGCAAACCAAGGGGGTGATAATCACATGCAGATTCCTCTGTCATCTGCCTATGCTTCTGTTTTACCTCCTG
GGCGAAACAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTCGACCACACTGATAATCGAAGCCAAATCATGTTC
CATCCTGCAATTGCCAACAAACTTAGTGGTCCTACTGCGAATATGTGCTCGAAGTACATCCAAAAGAACTTTTACGTCAATGATGAGCATAATGATGATAGAGAAATATC
ATCTCCTTTGATGGAGGATTTGGATGACATCGATGCATTATTGAGCTTGGAAGATGAAGATCACGAAGACATTGATGGGTCTGAAGATGAAGAGATCAGCACTGCAAGGT
CTCATTTGAATTATGGGAATCAATCCCCTGATTCTTCATCCTCCTCTTATAGTTCAAAACCCAGGAAGAATCGGTCATTTAATCCTGTCCACAAGTTGTCAAGCAGTGGA
AGAAGCAGCCGCGACAGTGACATGAAACAGTTAAAAGTGAAGAAAATGGTGAGAAAGCTGAGAGAGATTCTACCTGGTGGTTATCAAATGACAACAGTCACCGTTCTCGA
CGAAGCTGTTAAATACCTGAAATCTCTCAAAGATGAAGTGCAGAAACTCGGAGTCGGGGGCTTGGAGAACTAA

mRNA sequence

Show/hide mRNA sequence

AAAAGTTTTTAAATACTCTCTTACCCCTCGATCCCTCTCTCTCTCCCCCTCGATCCCTCTCATCTTCCTGCCAGATCTTTAGCTTGCAGACCAAATCTGGGGACTGATCT
ACCGAACTCTTACGAAAATCGTCCGATCGTCTTCGTTTTTCTGCCTGATTCAGCTCTGGAATCACTTTAGGATTGGGTTCGTCTTTATATTAAGTGGAATTGGAGAATAG
AATCAAGATGCCGTGGACAGCCTCCTTGGTGAATTACTGCAGCAAGTGTGTTCGCTTGGTGGTCTTCTTTCGTGTCATTCTGTAATTTGATTTGCATTGGAAATTAAAAC
GTTGATTTTGCTGGTCTTACTTTTGCGGCTGTTCCAATATTATATTACTGGTTGGAGGAGTGAGAATGTACATTGGTATTACGGGAAAGAGAAACAGAGCTGTGAAGGAA
GTTGGGAAGGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGTCAGAGTGACCTCAACTGTTACCTCAAAAACGCGATGCTTCCAACAGCAAA
CCAAGGGGGTGATAATCACATGCAGATTCCTCTGTCATCTGCCTATGCTTCTGTTTTACCTCCTGGGCGAAACAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTT
CTGAAGTTTGTCCCCAAAATTTCATCATCTTCGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAACTTAGTGGTCCTACTGCGAATATG
TGCTCGAAGTACATCCAAAAGAACTTTTACGTCAATGATGAGCATAATGATGATAGAGAAATATCATCTCCTTTGATGGAGGATTTGGATGACATCGATGCATTATTGAG
CTTGGAAGATGAAGATCACGAAGACATTGATGGGTCTGAAGATGAAGAGATCAGCACTGCAAGGTCTCATTTGAATTATGGGAATCAATCCCCTGATTCTTCATCCTCCT
CTTATAGTTCAAAACCCAGGAAGAATCGGTCATTTAATCCTGTCCACAAGTTGTCAAGCAGTGGAAGAAGCAGCCGCGACAGTGACATGAAACAGTTAAAAGTGAAGAAA
ATGGTGAGAAAGCTGAGAGAGATTCTACCTGGTGGTTATCAAATGACAACAGTCACCGTTCTCGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGATGAAGTGCAGAA
ACTCGGAGTCGGGGGCTTGGAGAACTAA

Protein sequence

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MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMF
HPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSG
RSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

Carg15398 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome