; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15429 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15429
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionrho GTPase-activating protein gacH
Genome locationCarg_Chr06:10300574..10301659
RNA-Seq ExpressionCarg15429
SyntenyCarg15429
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR036020 - WW domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597689.1 hypothetical protein SDJN03_10869, partial [Cucurbita argyrosperma subsp. sororia]4.2e-10498.99Show/hide
Query:  FGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS
        FGGLVMS PPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS
Subjt:  FGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS

Query:  ITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
        ITEDHYSEDYYYSDDDDDDDEDS+ESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
Subjt:  ITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP

KAG7029133.1 hypothetical protein SDJN02_10318 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-107100Show/hide
Query:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
        MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
Subjt:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE

Query:  DPRSITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN
        DPRSITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN
Subjt:  DPRSITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN

Query:  EIP
        EIP
Subjt:  EIP

XP_022932700.1 rho GTPase-activating protein gacH [Cucurbita moschata]6.2e-10097.04Show/hide
Query:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
        MFLSFGGLVMSTPPNMATITAALERSLQNCSLSR RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
Subjt:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE

Query:  DPRSITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN
        DPR ITEDHYSEDYYYS  DDDDDEDSDESSTESSNNNNEN KNYAAMEEQ EEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN
Subjt:  DPRSITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN

Query:  EIP
        EIP
Subjt:  EIP

XP_023540596.1 histone chaperone RTT106-like isoform X1 [Cucurbita pepo subsp. pepo]3.0e-10298.03Show/hide
Query:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
        MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLP HWEQCLDLKTGEIYYINWRNGMKAKE
Subjt:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE

Query:  DPRSITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN
        DPRSITEDHYSEDYYYSDDDDDD  DSDESSTESSNNNNENNKNYAAMEEQ EEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN
Subjt:  DPRSITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN

Query:  EIP
        EIP
Subjt:  EIP

XP_023540597.1 uncharacterized protein LOC111800911 isoform X2 [Cucurbita pepo subsp. pepo]6.9e-9990.05Show/hide
Query:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLK-----------------
        MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLP HWEQCLDLK                 
Subjt:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLK-----------------

Query:  -TGEIYYINWRNGMKAKEDPRSITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVE
         TGEIYYINWRNGMKAKEDPRSITEDHYSEDYYYSDDDDDD  DSDESSTESSNNNNENNKNYAAMEEQ EEEEEEEEDVLVVAGCKSCLMYFMVPKLVE
Subjt:  -TGEIYYINWRNGMKAKEDPRSITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVE

Query:  DCPKCSNGQLLHFDRSENEIP
        DCPKCSNGQLLHFDRSENEIP
Subjt:  DCPKCSNGQLLHFDRSENEIP

TrEMBL top hitse value%identityAlignment
A0A6J1F2V9 rho GTPase-activating protein gacH3.0e-10097.04Show/hide
Query:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
        MFLSFGGLVMSTPPNMATITAALERSLQNCSLSR RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
Subjt:  MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE

Query:  DPRSITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN
        DPR ITEDHYSEDYYYS  DDDDDEDSDESSTESSNNNNEN KNYAAMEEQ EEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN
Subjt:  DPRSITEDHYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSEN

Query:  EIP
        EIP
Subjt:  EIP

A0A6J1GTR7 uncharacterized protein LOC111457490 isoform X23.9e-5566.16Show/hide
Query:  MSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITE-D
        MS  P MAT+TAALERSL+NCSLS          H+Q   P  S S        L LNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR  TE D
Subjt:  MSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITE-D

Query:  HYSEDYY-YSDDDDDDDE--DSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
         YS+DYY YSDDDDDDD   DS+ESST SSNN N+N          +  EE++EEDVLVVAGCK CLMYFMVPK +E+CPKCS+G+LLHFDRSEN+IP
Subjt:  HYSEDYY-YSDDDDDDDE--DSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP

A0A6J1GTV5 protein Tube-like isoform X14.3e-5462.68Show/hide
Query:  MSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITE-D
        MS  P MAT+TAALERSL+NCSLS          H+Q   P  S S        L LNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR  TE D
Subjt:  MSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITE-D

Query:  HYSEDYY-YSDDDDDDDE-------------DSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLH
         YS+DYY YSDDDDDDD+             DS+ESST SSNN N+N          +  EE++EEDVLVVAGCK CLMYFMVPK +E+CPKCS+G+LLH
Subjt:  HYSEDYY-YSDDDDDDDE-------------DSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLH

Query:  FDRSENEIP
        FDRSEN+IP
Subjt:  FDRSENEIP

A0A6J1I5N3 uncharacterized protein LOC1114708946.1e-9393.91Show/hide
Query:  MSTPPNMATITAALERSLQNCSLSRH-RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITED
        MSTPPNMATITAALERSLQNCSLSRH RRRHHDHH QQQ APNSSSS LLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITED
Subjt:  MSTPPNMATITAALERSLQNCSLSRH-RRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITED

Query:  HYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQE--EEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
        HYSEDYYY DDDD    DSDESSTESSNNNN+NNKNYAAMEEQE  EEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
Subjt:  HYSEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQE--EEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP

A0A6J1IQL3 methionine aminopeptidase 2-like7.3e-5464.65Show/hide
Query:  MSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITE-D
        MS  P MAT+TAALERSLQNCSLS          H+Q   P  S S        L LNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR  TE D
Subjt:  MSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITE-D

Query:  HYSEDYY-YSDDDDDDDEDSDESS--TESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
         YS+DYY YSDDDDD+D+D D+SS  +E S+  + NNKN     + +  EE++EEDVLVVAGCK CLMYFMVPK +E+CPKCS+G+LL+FDRSEN+IP
Subjt:  HYSEDYY-YSDDDDDDDEDSDESS--TESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28070.1 unknown protein9.4e-3045.92Show/hide
Query:  MATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR-SITEDHY----
        MA IT  LERS+QNCSL   R    D           S   +      L+L+SH S+P H EQCLDLKTGEIYY +W +GM+ KEDPR S++  +Y    
Subjt:  MATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR-SITEDHY----

Query:  ---SEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP
           S    +S ++     +S+ESS+ESS ++ + +K            EE++EDVLVVAGCK+CLMYFMVPKL +DCPKC+  QLLHFD+  +  P
Subjt:  ---SEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP

AT2G33510.1 CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202)1.6e-4560.32Show/hide
Query:  PNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQP--PTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSI-TEDHY
        PNM TIT +LE+S+ NCSL+  RRR       +     SSS++ + P    TL+LNSH+SLP HWEQCLDLKTGEIYYINW+NGM+ KEDPR +   D  
Subjt:  PNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQP--PTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSI-TEDHY

Query:  SEDYY--YSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDR
        S D Y     ++D    DS+ESS+ESS ++ EN+K     EE+EEEEEEEEEDVLVVAGCK+C MYFMVPKLVEDCPKC+  QLLHFDR
Subjt:  SEDYY--YSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDR

AT2G33510.2 unknown protein1.7e-4255.88Show/hide
Query:  PNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQP--PTTLDLNSHISLPYHWEQCLDLK---------------TGEIYYINWRNGM
        PNM TIT +LE+S+ NCSL+  RRR       +     SSS++ + P    TL+LNSH+SLP HWEQCLDLK               TGEIYYINW+NGM
Subjt:  PNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQP--PTTLDLNSHISLPYHWEQCLDLK---------------TGEIYYINWRNGM

Query:  KAKEDPRSI-TEDHYSEDYY--YSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLL
        + KEDPR +   D  S D Y     ++D    DS+ESS+ESS ++ EN+K     EE+EEEEEEEEEDVLVVAGCK+C MYFMVPKLVEDCPKC+  QLL
Subjt:  KAKEDPRSI-TEDHYSEDYY--YSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLL

Query:  HFDR
        HFDR
Subjt:  HFDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTAAGCTTTGGTGGGTTAGTAATGAGTACACCTCCAAATATGGCAACAATCACAGCCGCCTTAGAACGCTCTCTTCAAAACTGTTCCTTAAGCCGCCACCGCCG
CCGCCATCATGATCATCATCACCAACAACAACAAGCCCCAAATTCCTCTTCTTCTGATCTTCTTCAACCTCCCACCACTTTGGACCTCAACTCCCATATCTCTCTCCCTT
ACCACTGGGAGCAGTGTCTCGATCTAAAGACGGGGGAGATTTACTACATAAACTGGAGGAATGGAATGAAGGCGAAGGAGGATCCGAGGTCTATCACAGAAGATCATTAT
AGTGAAGATTACTATTACTCGGATGACGATGACGATGACGATGAGGATAGCGACGAGTCGTCGACGGAGTCATCGAATAACAACAACGAGAACAACAAGAACTATGCAGC
GATGGAAGAACAGGAGGAAGAAGAAGAAGAAGAGGAGGAGGATGTGTTGGTGGTGGCAGGTTGCAAGAGCTGCCTAATGTATTTTATGGTGCCAAAGCTGGTTGAAGATT
GTCCAAAATGCAGTAATGGTCAGCTTCTTCATTTTGATCGCTCTGAAAATGAGATTCCATGA
mRNA sequenceShow/hide mRNA sequence
TCTTTCTTTCCTTCTGGTTCCTTCATTTGTTGTTCATGTTCCTAAGCTTTGGTGGGTTAGTAATGAGTACACCTCCAAATATGGCAACAATCACAGCCGCCTTAGAACGC
TCTCTTCAAAACTGTTCCTTAAGCCGCCACCGCCGCCGCCATCATGATCATCATCACCAACAACAACAAGCCCCAAATTCCTCTTCTTCTGATCTTCTTCAACCTCCCAC
CACTTTGGACCTCAACTCCCATATCTCTCTCCCTTACCACTGGGAGCAGTGTCTCGATCTAAAGACGGGGGAGATTTACTACATAAACTGGAGGAATGGAATGAAGGCGA
AGGAGGATCCGAGGTCTATCACAGAAGATCATTATAGTGAAGATTACTATTACTCGGATGACGATGACGATGACGATGAGGATAGCGACGAGTCGTCGACGGAGTCATCG
AATAACAACAACGAGAACAACAAGAACTATGCAGCGATGGAAGAACAGGAGGAAGAAGAAGAAGAAGAGGAGGAGGATGTGTTGGTGGTGGCAGGTTGCAAGAGCTGCCT
AATGTATTTTATGGTGCCAAAGCTGGTTGAAGATTGTCCAAAATGCAGTAATGGTCAGCTTCTTCATTTTGATCGCTCTGAAAATGAGATTCCATGA
Protein sequenceShow/hide protein sequence
MFLSFGGLVMSTPPNMATITAALERSLQNCSLSRHRRRHHDHHHQQQQAPNSSSSDLLQPPTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSITEDHY
SEDYYYSDDDDDDDEDSDESSTESSNNNNENNKNYAAMEEQEEEEEEEEEDVLVVAGCKSCLMYFMVPKLVEDCPKCSNGQLLHFDRSENEIP