CuGenDBv2

Gene ID	Carg15436
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transmembrane protein
Genome location	Carg_Chr06:10238863..10239375
RNA-Seq Expression	Carg15436
Synteny	Carg15436
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597681.1 DNA-directed RNA polymerases II and V subunit 8A, partial [Cucurbita argyrosperma subsp. sororia]

7.3e-86

99.4

Show/hide

Query:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
        MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSP TRQQVDSALRAVNREDADREDEETLG
Subjt:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG

Query:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGL
        PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGL
Subjt:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGL

KAG7029126.1 hypothetical protein SDJN02_10311, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.5e-88

100

Show/hide

Query:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
        MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
Subjt:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG

Query:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG
        PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG
Subjt:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG

XP_022932745.1 uncharacterized protein LOC111439202 [Cucurbita moschata]

7.8e-88

99.41

Show/hide

Query:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
        MGISASKRV+NSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
Subjt:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG

Query:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG
        PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG
Subjt:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG

XP_022972117.1 uncharacterized protein LOC111470752 [Cucurbita maxima]

2.0e-83

95.29

Show/hide

Query:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
        MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLI+KWLPSPPTR QVDSAL+AVNR DA REDEETLG
Subjt:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG

Query:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG
        PIRFK WA+ELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVG+MVAVYALGVATSMYLGLSG
Subjt:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG

XP_023539875.1 uncharacterized protein LOC111800422 [Cucurbita pepo subsp. pepo]

3.0e-87

98.24

Show/hide

Query:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
        MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLI+KWLPSPPTRQQVDSALRAVNREDADREDEETLG
Subjt:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG

Query:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG
        PIRFKRWA+ELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTM+AVYALGVATSMYLGLSG
Subjt:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVZ1 Uncharacterized protein

9.3e-71

83.53

Show/hide

Query:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
        MGISASKRV+NSL+NS +FDSAC+STFSHCL LTQHAY GVFPYQLCTAADHLH LLT V+PHPLI  WLPSPPTR QVDSALRAVNR+D+DRED E LG
Subjt:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG

Query:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG
         I F RWA+ELFAEAVVKNV K+VM RVPVGIAGIAGIGAVTRSGKD+VGT+VAVYALGVATS+YL LSG
Subjt:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG

A0A1S3BXX1 uncharacterized protein LOC103494601

2.1e-70

82.35

Show/hide

Query:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
        MG+SASKRV+NSL+NSP+FDSAC+STFSHCL LTQHAY GVFPYQLCTAADHLH LLT V+PHPLI  WLPSPPTR QVDSALRAVNR+D+D E  ETLG
Subjt:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG

Query:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG
         IRF+RWA+ELFAEAVVKNV K+VM RVP+GIAGIAGIGAVTRSGKD+VG +VAVYALGVATS+YL LSG
Subjt:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG

A0A5D3D2N6 Uncharacterized protein

2.1e-70

82.35

Show/hide

Query:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
        MG+SASKRV+NSL+NSP+FDSAC+STFSHCL LTQHAY GVFPYQLCTAADHLH LLT V+PHPLI  WLPSPPTR QVDSALRAVNR+D+D E  ETLG
Subjt:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG

Query:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG
         IRF+RWA+ELFAEAVVKNV K+VM RVP+GIAGIAGIGAVTRSGKD+VG +VAVYALGVATS+YL LSG
Subjt:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG

A0A6J1F2Z4 uncharacterized protein LOC111439202

3.8e-88

99.41

Show/hide

Query:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
        MGISASKRV+NSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
Subjt:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG

Query:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG
        PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG
Subjt:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG

A0A6J1I3X0 uncharacterized protein LOC111470752

9.6e-84

95.29

Show/hide

Query:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
        MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLI+KWLPSPPTR QVDSAL+AVNR DA REDEETLG
Subjt:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG

Query:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG
        PIRFK WA+ELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVG+MVAVYALGVATSMYLGLSG
Subjt:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G43540.1 unknown protein

1.3e-48

57.99

Show/hide

Query:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG
        MGIS SKRV   LSNSP+FDSACDS +   L L QHA+AGV PYQL +AA H+HR L+ +R  PLI +WL SPP++ QVDSALR         ++EE LG
Subjt:  MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLG

Query:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLS
           FK+WA+E+FAEAVV N  K +  R+P+GI GI GIGAVTRSG++L+G  + VYA+GVATS++L L+
Subjt:  PIRFKRWAMELFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAATATCAGCCTCAAAACGAGTCAAGAACTCACTGTCGAACTCGCCCGATTTCGACTCAGCCTGCGATTCCACTTTCTCCCACTGCCTTGACCTAACGCAGCACGC
ATACGCCGGCGTTTTCCCCTACCAACTCTGCACCGCCGCCGACCACCTCCACCGTCTCCTCACCACCGTCCGCCCTCATCCACTCATTGCCAAGTGGCTTCCCTCTCCCC
CGACTCGGCAACAGGTCGACTCAGCCCTGCGAGCCGTCAATCGCGAGGACGCGGATCGTGAAGACGAAGAAACCCTAGGACCGATCCGCTTCAAGCGTTGGGCGATGGAG
CTATTCGCAGAGGCTGTAGTGAAGAATGTCAGCAAAGAAGTGATGTTTCGAGTTCCGGTCGGAATTGCAGGAATCGCGGGAATCGGCGCCGTGACTCGGTCGGGAAAGGA
CCTGGTTGGGACTATGGTTGCAGTGTACGCGCTTGGCGTTGCGACTTCGATGTACCTTGGCTTGTCAGGATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTVRPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLGPIRFKRWAME
LFAEAVVKNVSKEVMFRVPVGIAGIAGIGAVTRSGKDLVGTMVAVYALGVATSMYLGLSG

Carg15436 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome