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Carg15446 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15446
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionIQ domain-containing protein/TIG domain-containing protein/CG-1 domain-containing protein/Ank_2 domain-containing protein
Genome locationCarg_Chr06:10191294..10194002
RNA-Seq ExpressionCarg15446
SyntenyCarg15446
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029116.1 hypothetical protein SDJN02_10301 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-77100Show/hide
Query:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG
        MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG
Subjt:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG

Query:  RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
        RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
Subjt:  RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
XP_022932613.1 uncharacterized protein LOC111439117 isoform X1 [Cucurbita moschata]4.8e-6891.56Show/hide
Query:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG
        MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPV+PTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAA+VSSLFMIG
Subjt:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG

Query:  RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
        RSILYYVTAQP PRKDIPGRSGP+PCFC         AHQALKLPPDVPILYYY
Subjt:  RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
XP_022932614.1 uncharacterized protein LOC111439117 isoform X2 [Cucurbita moschata]2.8e-5297.46Show/hide
Query:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG
        MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPV+PTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAA+VSSLFMIG
Subjt:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG

Query:  RSILYYVTAQPAPRKDIP
        RSILYYVTAQP PRKDIP
Subjt:  RSILYYVTAQPAPRKDIP
XP_022972186.1 uncharacterized protein LOC111470796 [Cucurbita maxima]6.9e-7596.75Show/hide
Query:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG
        MMRRQQ+RNSQSSVFYELSSLAMNILRSPPSSIPF+DHSPVVPTQMTPA FASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFF AAVVSSLFMIG
Subjt:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG

Query:  RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
        RSILYYVTAQPAPRKDIPGRSGP+PCFCAHQALTNSDAHQALKLPPDVPILYYY
Subjt:  RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
XP_023538787.1 uncharacterized protein LOC111799610 isoform X1 [Cucurbita pepo subsp. pepo]3.8e-7396.75Show/hide
Query:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG
        MMRR  QRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAA VSSLFMIG
Subjt:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG

Query:  RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
        RSILYYVTAQPAPRKDIPGRSGP+PCFCAHQALTNSDA QALKLPPDVPILYYY
Subjt:  RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
TrEMBL top hitse value%identityAlignment
A0A1S3BYH6 uncharacterized protein LOC103494590 isoform X12.9e-3976.74Show/hide
Query:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVV----------PTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVA
        MM+RQQ+   +SSVFYELSSL MNILR+PPSSIPFSDHSPVV          P Q+TPAGFASLLLG+SLALMLCGSVTFFIGFMMMPWVIGLVMFF+VA
Subjt:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVV----------PTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVA

Query:  AVVSSLFMIGRSILYYVTAQPAPRKDIPG
        AVVS L MIGRSI+ Y TA   PRKDIPG
Subjt:  AVVSSLFMIGRSILYYVTAQPAPRKDIPG
A0A5A7TRR9 Uncharacterized protein2.9e-3976.74Show/hide
Query:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVV----------PTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVA
        MM+RQQ+   +SSVFYELSSL MNILR+PPSSIPFSDHSPVV          P Q+TPAGFASLLLG+SLALMLCGSVTFFIGFMMMPWVIGLVMFF+VA
Subjt:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVV----------PTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVA

Query:  AVVSSLFMIGRSILYYVTAQPAPRKDIPG
        AVVS L MIGRSI+ Y TA   PRKDIPG
Subjt:  AVVSSLFMIGRSILYYVTAQPAPRKDIPG
A0A6J1EXH3 uncharacterized protein LOC111439117 isoform X21.4e-5297.46Show/hide
Query:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG
        MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPV+PTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAA+VSSLFMIG
Subjt:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG

Query:  RSILYYVTAQPAPRKDIP
        RSILYYVTAQP PRKDIP
Subjt:  RSILYYVTAQPAPRKDIP
A0A6J1F279 uncharacterized protein LOC111439117 isoform X12.3e-6891.56Show/hide
Query:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG
        MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPV+PTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAA+VSSLFMIG
Subjt:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG

Query:  RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
        RSILYYVTAQP PRKDIPGRSGP+PCFC         AHQALKLPPDVPILYYY
Subjt:  RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
A0A6J1I5A3 uncharacterized protein LOC1114707963.3e-7596.75Show/hide
Query:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG
        MMRRQQ+RNSQSSVFYELSSLAMNILRSPPSSIPF+DHSPVVPTQMTPA FASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFF AAVVSSLFMIG
Subjt:  MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG

Query:  RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
        RSILYYVTAQPAPRKDIPGRSGP+PCFCAHQALTNSDAHQALKLPPDVPILYYY
Subjt:  RSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27290.1 unknown protein4.3e-2751.15Show/hide
Query:  MRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQ-------------------MTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIG
        M R+Q+   QS VFY+LSSL +N+LRSPP  I   DH P  P +                   ++P+GFASLLLG+S+ALMLCGSVTFFIGF++MPWV+ 
Subjt:  MRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQ-------------------MTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIG

Query:  LVMFFFVAAVVSSLFMIGRSILYYVTAQPAP
        L++ F+VA +VS++ M+GRSIL YV   P+P
Subjt:  LVMFFFVAAVVSSLFMIGRSILYYVTAQPAP
AT1G27290.2 unknown protein4.3e-2751.15Show/hide
Query:  MRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQ-------------------MTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIG
        M R+Q+   QS VFY+LSSL +N+LRSPP  I   DH P  P +                   ++P+GFASLLLG+S+ALMLCGSVTFFIGF++MPWV+ 
Subjt:  MRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQ-------------------MTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIG

Query:  LVMFFFVAAVVSSLFMIGRSILYYVTAQPAP
        L++ F+VA +VS++ M+GRSIL YV   P+P
Subjt:  LVMFFFVAAVVSSLFMIGRSILYYVTAQPAP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCGGCGGCAGCAGCAGCGGAATTCCCAATCGAGTGTTTTCTACGAGCTTTCTTCTCTTGCCATGAATATTCTCCGATCGCCTCCGTCGTCAATCCCGTTTTCCGA
TCACTCACCGGTGGTGCCGACGCAGATGACCCCGGCCGGGTTTGCGTCGCTTCTTCTAGGGATGTCTCTGGCTCTGATGCTCTGTGGATCGGTTACGTTCTTCATCGGCT
TCATGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTTTGTCGCCGCCGTTGTTTCGAGCCTCTTCATGATCGGACGTTCGATCTTATACTACGTTACGGCTCAG
CCTGCGCCCAGAAAGGACATCCCAGGACGTTCAGGTCCCGTTCCTTGCTTTTGTGCTCACCAGGCTTTGACAAACAGCGATGCTCACCAGGCTTTAAAATTACCTCCAGA
CGTCCCAATCCTTTACTATTATTAA
mRNA sequenceShow/hide mRNA sequence
CAATCCGAACTGAAATTCTAGGAAATTGTGAACGAGAGCTTTCTGGGTGAACGGAAAAGGGTTCTTTAGTTCAATATTTGAGTTGGGTTTTCACCGTTCTATGTGTTTGT
GTGTGTGTGTGAATGCATTTAGTTGTGTGTTGAATTCTTAAGAAACAAACAAAAGTTTTGCCTATCAGACTTATCCACTCGCTGTTGTGGTTGCTGTTGAGGGGTTTTAG
TCTTGCCAATCCAATCACGGACCCCCCCAGTTCCATAAAGTTCCTTAGATTTATCGATTTCCCTTGAATCATTCAACAAAAGCGTTTTTGGGTTTTCGTTCTCGACGTTG
AGAGGATTTTCCCTTTTGGAGATTTGGAGATTTTTTGACCGAAGAATTATGATGCGGCGGCAGCAGCAGCGGAATTCCCAATCGAGTGTTTTCTACGAGCTTTCTTCTCT
TGCCATGAATATTCTCCGATCGCCTCCGTCGTCAATCCCGTTTTCCGATCACTCACCGGTGGTGCCGACGCAGATGACCCCGGCCGGGTTTGCGTCGCTTCTTCTAGGGA
TGTCTCTGGCTCTGATGCTCTGTGGATCGGTTACGTTCTTCATCGGCTTCATGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTTTGTCGCCGCCGTTGTTTCG
AGCCTCTTCATGATCGGACGTTCGATCTTATACTACGTTACGGCTCAGCCTGCGCCCAGAAAGGACATCCCAGGACGTTCAGGTCCCGTTCCTTGCTTTTGTGCTCACCA
GGCTTTGACAAACAGCGATGCTCACCAGGCTTTAAAATTACCTCCAGACGTCCCAATCCTTTACTATTATTAAGCCCACCAAACTTGTCAAGGCTTTATTTACCTTATAC
TTTACTATTAGGCCGCCCAAACTTGTCAAGGCGTTGGAAAAGGTCTTTGTGAGGATGTCAACCTCTTTTAGGCCCACAAGCTTGTCAAGCCATGGGTTAAAAAGACGGTG
TGTGGATGCCAACCTCTATTTGGCTTATACTTTACTGTTAGGGCCACCAAACTTGTTTGCCTTGTAGGCGTGGAGTTCTATTTTCATTCACACTACACAACTTAGCTTGT
GAACCCATCAATATGCTCGAGCTGCCTATGCTCTACAACTTCTGATGAGGGTCGAGTTCAGGGAGTTTTGGTGTAATACCCCAAGCACACCGTTAACGGATATTATCCTC
TTTGGGCTTTTCCTTCTGGGCTTTCCCTTAAGGTTTTAAAACGCATCTGCTAGGAAGAGGTTTCCACACCCTCATAGAGGGTGTTTTGTTTCACTGTCCAACCTACGTGG
GATCTCACATTGGAGTTGGTTGCTCTAGTTTGAAATTGAGTTGAAAAAATGTATATGGCTGTTCTTCGTACTCGAGAATGGTTCGTTGTATCCACATCCTTGGACATGTA
TATATACTAGAATCTTTAGAGAATGTCAACTTTGGTACCAATAGAAACAGGAAAAAGTCTCTTCTGGTCTGCAACTCTGAGTTTTTTGGGCTGTTAATACTCCTAAATGG
AGTCTAATTGTCTTCTTTGTTACCAACGTTTCTTGCTCGATCTTGAAGTAAAAGCTGGATGATTCAATGCTGCATTTTATTACTTGTCTCTCTTACCATAAGCACTTCAT
TGGTTAATACTTATAAATGCCTTGCATTTCATCATTAGTAGAGTGATAGGACTAAGAAGATTAGCTAACCTCTCAATGACCTCCCTTCCGAATTAGTTGTTTTAATCAAC
CGCTATCTCGTCTTTCGCTCGTGTTTTTTTGTTTGTAACAATCAACACATGTACTTTTGTGGCTGCAGCTTGGAAGTTAATGTGAAGAGGACGCTGATGTTTGAAACTAG
CAATTATTGTTTATGGTGGTTGTGGAGGGCTCTAATATCCTCGGTGCTGTGCTGCGCTGCCCGTTGGCTTTCTTCTCGACTCGACTCGGCTGAGAAGAAGTGTTTGTTAA
TATTATATTTCAAACTGGATCCTGTTCATATTGTTTCTGTTAAATTGAAGGGAGCAAACTGTTGGAGGTGGGGACGTTGCTCCATTTCATTTCCTCCTCTTGGTGTATCC
CATAGGCCATAGCCATACCTTTAGAGGTAAATTTGTTTTGATTATAGAAGAAGTAATTAGCAGCTACTGAATTCTCAAAGATCTCGAGCTAGCCTCGCCCCTTCTTCGTT
GAAG
Protein sequenceShow/hide protein sequence
MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIGRSILYYVTAQ
PAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY