; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15449 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15449
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description54S ribosomal protein L51, mitochondrial
Genome locationCarg_Chr06:10170343..10172628
RNA-Seq ExpressionCarg15449
SyntenyCarg15449
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR007741 - Ribosomal protein/NADH dehydrogenase domain
IPR036249 - Thioredoxin-like superfamily
IPR039927 - 39S ribosomal protein L43/54S ribosomal protein L51


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597670.1 hypothetical protein SDJN03_10850, partial [Cucurbita argyrosperma subsp. sororia]7.4e-61100Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTD
        RHVTKNPSVQGTWKTD
Subjt:  RHVTKNPSVQGTWKTD

KAG7029113.1 mrpl51 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-62100Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

XP_022932626.1 54S ribosomal protein L51, mitochondrial [Cucurbita moschata]3.9e-6299.16Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQL+VVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

XP_022972093.1 54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima]1.1e-6198.32Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQL+VVRELIRGQHPHLKAFYKNNNQRVVCVRNLD EEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

XP_023538941.1 54S ribosomal protein L51, mitochondrial-like [Cucurbita pepo subsp. pepo]5.7e-6197.48Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDW GSSRGIRAFMDSQLPDFKKKNPQL+VVRELIRGQHPHLKAFYKNNNQRVVCVRNLD EEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

TrEMBL top hitse value%identityAlignment
A0A061EJZ0 Mitochondrial ribosomal protein L51/S25/CI-B8 family protein4.7e-5384.03Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFM+SQLP FK+KNPQLEVV ELIRGQHPHLK FYKN N+RV+CV+N+  E+I LHA+RLRNALGRKV+KLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTK+PSVQGTW TDV+F
Subjt:  RHVTKNPSVQGTWKTDVRF

A0A6J1DVX7 54S ribosomal protein L51, mitochondrial3.2e-5791.6Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLP FK+KNPQLEVV ELIRGQHPHLKAFYKNNN+RVVCV+NLD EEI+LHA RLRNALGRKVIKL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTW TDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

A0A6J1EWV2 54S ribosomal protein L51, mitochondrial1.9e-6299.16Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQL+VVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

A0A6J1I8W1 54S ribosomal protein L51, mitochondrial-like5.5e-6298.32Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQL+VVRELIRGQHPHLKAFYKNNNQRVVCVRNLD EEIHLHATRLRNALGRKVIKLKT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPSVQGTWKTDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

A0A6J1IW90 54S ribosomal protein L51, mitochondrial-like2.5e-5483.19Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQL+KLIVSYCDWGGSSRGIRAFMDS+LP F++KNPQL++V ELIRGQHPHLK FYK+NN RV+CV+N+D E+IHLHATRLRNALGRKV+KL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTKNPS QGTW TDVRF
Subjt:  RHVTKNPSVQGTWKTDVRF

SwissProt top hitse value%identityAlignment
Q06090 54S ribosomal protein L51, mitochondrial1.6e-1033.33Show/hide
Query:  VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPDFKKKNP--QLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRH
        V+  +K+ + +C+WGGSS G+R F+ S +L  + ++ P  Q EV+R   +  HP L+A Y N  ++V+CVRNL+ + +      L+++ G  +++ +T++
Subjt:  VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPDFKKKNP--QLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRH

Query:  ---VTKNPSVQGTW
            + N SV+G W
Subjt:  ---VTKNPSVQGTW

Q758S3 54S ribosomal protein L51, mitochondrial3.9e-1234.48Show/hide
Query:  VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVT
        ++  +K+ + YC+WGGSS+G+R F+ S +L  + +K PQ++    + +  HP LKA Y N   + +CVRNL+ + + L    LR + G ++     RH  
Subjt:  VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVT

Query:  K-------NPSVQGTW
        K       N SV+G W
Subjt:  K-------NPSVQGTW

Q8N983 39S ribosomal protein L43, mitochondrial2.6e-0833.64Show/hide
Query:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHV
        R V QLQ+L  S    G SSRG R F++ ++ DF ++NP + +         P + A Y N   R   +     EEI     +L +  G  VI+++    
Subjt:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHV

Query:  TKNPSVQGTW
        T NPS+QG W
Subjt:  TKNPSVQGTW

Q99N89 39S ribosomal protein L43, mitochondrial1.5e-0834.55Show/hide
Query:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHV
        R V QLQ+L +S      SSRG R F++ ++ DF ++NP + V         P + A Y N   R   V +   EEI     +L +  G  VI+++    
Subjt:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHV

Query:  TKNPSVQGTW
        T NPS+QG W
Subjt:  TKNPSVQGTW

Q9UUC8 54S ribosomal protein L51, mitochondrial2.1e-1332.69Show/hide
Query:  QKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSV
        +++  SYC+WGGSS+G++ F+ ++L    K++  +E      +G+HP ++A+Y    ++V+C R + A  I   A   R++ G K   +K    + NPSV
Subjt:  QKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSV

Query:  QGTW
        +G W
Subjt:  QGTW

Arabidopsis top hitse value%identityAlignment
AT3G59650.1 mitochondrial ribosomal protein L51/S25/CI-B8 family protein4.4e-5174.79Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT
        MALRGVWQL+KL+VSYC+WGGSSRGIRAFM+S+LP  K+KNPQLEV+ EL RGQHP+LK  Y+N N+RVVCV+N+D EE+ L+ATRLRN+LGRKV+KL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKT

Query:  RHVTKNPSVQGTWKTDVRF
        RHVTK+PSVQGTW T V+F
Subjt:  RHVTKNPSVQGTWKTDVRF

AT3G59650.2 mitochondrial ribosomal protein L51/S25/CI-B8 family protein1.9e-4660.96Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYK---------------------------NNNQRVVCVR
        MALRGVWQL+KL+VSYC+WGGSSRGIRAFM+S+LP  K+KNPQLEV+ EL RGQHP+LK  Y                            N N+RVVCV+
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYK---------------------------NNNQRVVCVR

Query:  NLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTDVRF
        N+D EE+ L+ATRLRN+LGRKV+KL+TRHVTK+PSVQGTW T V+F
Subjt:  NLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTDVRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTACGAGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGTGGAAGCAGTAGGGGTATCAGGGCATTTATGGACTCGCAATTGCCAGATTT
TAAGAAGAAAAACCCTCAGCTAGAAGTAGTTCGTGAACTCATTCGTGGGCAGCATCCACACTTGAAGGCCTTCTACAAGAACAATAATCAACGGGTGGTATGTGTAAGGA
ATTTGGATGCGGAAGAAATACATTTACATGCAACGAGGCTAAGGAATGCACTGGGGCGAAAGGTCATAAAACTGAAGACAAGACATGTGACCAAAAATCCTAGTGTGCAA
GGTACGTGGAAAACTGATGTAAGATTTTGA
mRNA sequenceShow/hide mRNA sequence
AATCGCTCGAGCCTCCCTCCATCATTTGCTCTCCCGCTCTTTGTCGCTCTTTGGGTCTCTTCGTTGGTAGCCGCACCGATCCTCTGTCTCAGATATAAAGATGGCTTTAC
GAGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGTGGAAGCAGTAGGGGTATCAGGGCATTTATGGACTCGCAATTGCCAGATTTTAAGAAGAAA
AACCCTCAGCTAGAAGTAGTTCGTGAACTCATTCGTGGGCAGCATCCACACTTGAAGGCCTTCTACAAGAACAATAATCAACGGGTGGTATGTGTAAGGAATTTGGATGC
GGAAGAAATACATTTACATGCAACGAGGCTAAGGAATGCACTGGGGCGAAAGGTCATAAAACTGAAGACAAGACATGTGACCAAAAATCCTAGTGTGCAAGGTACGTGGA
AAACTGATGTAAGATTTTGAGGATGCTTCCTAAAGTGCCTGATTTTCTTTCGAGATTGTCTTTTTCCATCAAGATTATGAGATTCCTTAATATGACGTTGTTGAAACAAA
ACTTCTTTTTAGAGTAGCTTGAGTTTGTAGTTTGTAGTAGTCCAACGTAAACTTTTGAGGCTATTTTGTTCCAATTCTCTGAATACTCTCTCTGGAGAAAGTCTTTCCAT
GAAACATGCAACAATTGCGAACTTATCTTGAATTGATGAAGCAAAACAGGATTCTGAATTTATTTGTGAACATATTTATAGGTTGTTGTGATGTTAATTAAATGAGATCC
AAGAGTAAATGATATGAACTTGGTTCATATCAGTAAATGCAGCAGCTAGTCCTTGTATGGTATTCTTGGTTGGGGTATTGTCCTTTTCTTTGCCATGTTATAATAATGAA
TGCAAGAGTTGTTGTTTCATTTTAGATTGGTTATGTGGTTTTTTCCAGTCTTAAATGTCGATGAAAGGTTCGACCAAAATGGAGCGAAAACGGGAAGTTGGATGAAAAGA
AGTGAAGGAAAGAATTACTAGTAGAAGGGGGAAAAAAAAAACTAGCAAACAATAAAAGAAAAAAGATCCCGTTAGGAATCACGAACTTTCACAATAATATTGTCCACTTT
GAGCATAAACTCTCATGACTTTGCTTTTGGTTTGCCCAAAGGGTCTCACGTCAATGGAGAGATTAAAGTTCGGCC
Protein sequenceShow/hide protein sequence
MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQ
GTWKTDVRF