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Carg15455 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15455
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSAUR-like auxin-responsive protein family
Genome locationCarg_Chr06:10140568..10140975
RNA-Seq ExpressionCarg15455
SyntenyCarg15455
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597664.1 Auxin-responsive protein SAUR71, partial [Cucurbita argyrosperma subsp. sororia]1.5e-7398.52Show/hide
Query:  MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFY
        MKAFIFT+PWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFY
Subjt:  MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFY

Query:  RVLRKMDDGFDVLHGHGSQKLYGSHHLFIPSRWME
        RVLRKMDDGFDVLHGHGSQKLYGS HLFIPSRWME
Subjt:  RVLRKMDDGFDVLHGHGSQKLYGSHHLFIPSRWME

KAG7029107.1 Auxin-responsive protein SAUR71, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-75100Show/hide
Query:  MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFY
        MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFY
Subjt:  MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFY

Query:  RVLRKMDDGFDVLHGHGSQKLYGSHHLFIPSRWME
        RVLRKMDDGFDVLHGHGSQKLYGSHHLFIPSRWME
Subjt:  RVLRKMDDGFDVLHGHGSQKLYGSHHLFIPSRWME

TQE05047.1 hypothetical protein C1H46_009339 [Malus baccata]6.7e-2649.31Show/hide
Query:  IFTSPWKCCKSIDNGSITSLVEDEEAIVDK--------------HRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPL
        + T  WK CKSI  G  T++     A+  K               R  K +VAPEG F+VYVG + QRFVIK E A+HPLFKMLL+EA+ E+GY+S+ PL
Subjt:  IFTSPWKCCKSIDNGSITSLVEDEEAIVDK--------------HRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPL

Query:  WLPCKVGRFYRVLRKMDDGFD--VLHGHGSQKLYGSHHLFIPSR
         LPC V  FY+VL +MDD  D  V  G G  K YGS+HL  PSR
Subjt:  WLPCKVGRFYRVLRKMDDGFD--VLHGHGSQKLYGSHHLFIPSR

XP_017179030.1 auxin-responsive protein SAUR32-like [Malus domestica]8.8e-2648.61Show/hide
Query:  IFTSPWKCCKSIDNGSITSLVEDEEAIVDK--------------HRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPL
        + T  WK CKSI  G  T++     A+  K               R  K +VAPEG F+VYVG + QRFV+K E A+HPLFKMLL+EA+ E+GY+S+ PL
Subjt:  IFTSPWKCCKSIDNGSITSLVEDEEAIVDK--------------HRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPL

Query:  WLPCKVGRFYRVLRKMDDGFD--VLHGHGSQKLYGSHHLFIPSR
         LPC V  FY+VL +MDD  D  V  G G  K YGS+HL  PSR
Subjt:  WLPCKVGRFYRVLRKMDDGFD--VLHGHGSQKLYGSHHLFIPSR

XP_023539362.1 auxin-responsive protein SAUR72-like [Cucurbita pepo subsp. pepo]3.4e-7094.07Show/hide
Query:  MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFY
        MKAFIFT+PWKCCKSIDN SITSLV DEEAI+DKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLL+EA+ EYGYNSQAPLWLPCKVGRFY
Subjt:  MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFY

Query:  RVLRKMDDGFDVLHGHGSQKLYGSHHLFIPSRWME
        RVLRKMDDGFDVLHGHGSQKLYGS HLFIPSRWME
Subjt:  RVLRKMDDGFDVLHGHGSQKLYGSHHLFIPSRWME

TrEMBL top hitse value%identityAlignment
A0A2I4DXF0 auxin-responsive protein SAUR32-like1.2e-2547.22Show/hide
Query:  KAFIFTSPWKCCKSIDNGSITSLVEDEE-------------AIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQA
        K  +    W+ CKSI  G   S   +               ++ ++  PRK RVAPEG FSVYVG + Q+FVIK E A+HPLFKMLL+EA+ EYGY++Q 
Subjt:  KAFIFTSPWKCCKSIDNGSITSLVEDEE-------------AIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQA

Query:  PLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQKLYGSHHLFIPSR
        PL LPC V  F++VL +M+DG D+  G    K YGS+HL  PSR
Subjt:  PLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQKLYGSHHLFIPSR

A0A498HR56 Uncharacterized protein4.3e-2648.61Show/hide
Query:  IFTSPWKCCKSIDNGSITSLVEDEEAIVDK--------------HRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPL
        + T  WK CKSI  G  T++     A+  K               R  K +VAPEG F+VYVG + QRFV+K E A+HPLFKMLL+EA+ E+GY+S+ PL
Subjt:  IFTSPWKCCKSIDNGSITSLVEDEEAIVDK--------------HRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPL

Query:  WLPCKVGRFYRVLRKMDDGFD--VLHGHGSQKLYGSHHLFIPSR
         LPC V  FY+VL +MDD  D  V  G G  K YGS+HL  PSR
Subjt:  WLPCKVGRFYRVLRKMDDGFD--VLHGHGSQKLYGSHHLFIPSR

A0A540N1V8 Uncharacterized protein3.3e-2649.31Show/hide
Query:  IFTSPWKCCKSIDNGSITSLVEDEEAIVDK--------------HRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPL
        + T  WK CKSI  G  T++     A+  K               R  K +VAPEG F+VYVG + QRFVIK E A+HPLFKMLL+EA+ E+GY+S+ PL
Subjt:  IFTSPWKCCKSIDNGSITSLVEDEEAIVDK--------------HRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPL

Query:  WLPCKVGRFYRVLRKMDDGFD--VLHGHGSQKLYGSHHLFIPSR
         LPC V  FY+VL +MDD  D  V  G G  K YGS+HL  PSR
Subjt:  WLPCKVGRFYRVLRKMDDGFD--VLHGHGSQKLYGSHHLFIPSR

A0A5N6R404 Uncharacterized protein1.6e-2548.99Show/hide
Query:  KAFIFTSPWKCCKSIDNG----------------SITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYN
        K  +    W+ CKSI +G                S  SLVE+E+      R RK RVAPEG FSVYVG E Q+FVIK E A+HPLF+MLL+EA+ EYGY 
Subjt:  KAFIFTSPWKCCKSIDNG----------------SITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYN

Query:  SQAPLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQKLYGSHHLFIPSRWM
        +Q PL LPC V  F +VL +M+D   + HG G  K YGS+HL  PSR +
Subjt:  SQAPLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQKLYGSHHLFIPSRWM

A0A6J1D5E1 auxin-responsive protein SAUR71-like2.1e-2550.72Show/hide
Query:  WKCCKSIDNGSITSL-----------------VEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWL
        W+ CKSI  G  +S                  +E EEA  +K R R  RVAPEG F+VYVG E QRFV+K E A+HPLF+MLL+EA+ EYG+NSQAPLWL
Subjt:  WKCCKSIDNGSITSL-----------------VEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWL

Query:  PCKVGRFYRVLRKMDDGFDVLHGHGSQKLYGSHHLFIP
        PC V  FYRVL +M D  D+  G+   K  GS+H   P
Subjt:  PCKVGRFYRVLRKMDDGFDVLHGHGSQKLYGSHHLFIP

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR402.5e-0737.88Show/hide
Query:  PEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDG
        P G+  V VG + +RFV+  E  +HP+F  LL+ +  EYGY  +  L +PC V  F +V+  +  G
Subjt:  PEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDG

P32295 Indole-3-acetic acid-induced protein ARG71.9e-0743.08Show/hide
Query:  KLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGY-NSQAPLWLPCKVGRFYRV
        K+  AP+GY +VYVG  M+RFVI V   + PLF+ LL +A+ E+GY +    L +PC    F  +
Subjt:  KLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGY-NSQAPLWLPCKVGRFYRV

Q9LTV3 Auxin-responsive protein SAUR722.4e-1038.27Show/hide
Query:  VDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDV
        V +   ++    PEG+  VYVG EM+RFV+  E  +HP+F  LL+ +  EYGY  +  L +PC V  F R++  +  G  V
Subjt:  VDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDV

Q9SA49 Auxin-responsive protein SAUR411.2e-0942.03Show/hide
Query:  RKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKM
        R++   P G+  VYVG EM+RFV+  E  +HP+F  LL+ +  EYGY  +  L +PC V  F RV+  +
Subjt:  RKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKM

Q9SGU2 Auxin-responsive protein SAUR712.4e-1047.62Show/hide
Query:  PEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKM
        PEG+  VYVG EM+RFV+  E  +HP+F  LL ++  EYGY  Q  L +PC V  F R+L  +
Subjt:  PEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKM

Arabidopsis top hitse value%identityAlignment
AT1G56150.1 SAUR-like auxin-responsive protein family1.7e-1147.62Show/hide
Query:  PEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKM
        PEG+  VYVG EM+RFV+  E  +HP+F  LL ++  EYGY  Q  L +PC V  F R+L  +
Subjt:  PEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKM

AT2G37030.1 SAUR-like auxin-responsive protein family5.9e-1245.31Show/hide
Query:  RVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLR
        R  P+G+  VYVG E +RFVI +    HPLF+ LLD+A+  YG+++ + LW+PC    F  V+R
Subjt:  RVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLR

AT5G20810.1 SAUR-like auxin-responsive protein family5.9e-1237.5Show/hide
Query:  DEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLH
        DEE       P  +   P+G  +VYVG E++RF+I     SH LFK+LL++A+ E+G++    L +PC+V  F  +L+ M++    LH
Subjt:  DEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLH

AT5G20810.2 SAUR-like auxin-responsive protein family5.9e-1237.5Show/hide
Query:  DEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLH
        DEE       P  +   P+G  +VYVG E++RF+I     SH LFK+LL++A+ E+G++    L +PC+V  F  +L+ M++    LH
Subjt:  DEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLH

AT5G50760.1 SAUR-like auxin-responsive protein family1.7e-1437.04Show/hide
Query:  VEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKM---------DDGFDVLHG
        +ED ++   K +P+K      G+F+VYVG   QR V+K +  +HPLFK LL++A+ EYGY    P+ LPC+V  F++ L  M         DD +D   G
Subjt:  VEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKM---------DDGFDVLHG

Query:  HGSQKLYG
          +  + G
Subjt:  HGSQKLYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCATTCATCTTCACCAGCCCTTGGAAATGCTGCAAATCGATCGACAACGGATCGATAACCTCCTTGGTCGAAGACGAAGAAGCTATCGTCGACAAACACCGCCC
ACGAAAGCTGAGGGTGGCACCGGAGGGTTATTTCTCAGTCTACGTCGGAGTTGAAATGCAAAGGTTTGTGATCAAAGTTGAGCGAGCAAGCCATCCGCTGTTCAAGATGC
TGCTCGACGAAGCGAAGCTCGAATATGGATATAACAGCCAAGCTCCTCTTTGGCTTCCATGCAAAGTTGGTAGGTTTTACAGAGTGTTGAGGAAGATGGATGATGGCTTT
GATGTTCTCCATGGCCATGGAAGTCAAAAGCTTTACGGCTCTCATCATCTTTTTATCCCATCTCGTTGGATGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCATTCATCTTCACCAGCCCTTGGAAATGCTGCAAATCGATCGACAACGGATCGATAACCTCCTTGGTCGAAGACGAAGAAGCTATCGTCGACAAACACCGCCC
ACGAAAGCTGAGGGTGGCACCGGAGGGTTATTTCTCAGTCTACGTCGGAGTTGAAATGCAAAGGTTTGTGATCAAAGTTGAGCGAGCAAGCCATCCGCTGTTCAAGATGC
TGCTCGACGAAGCGAAGCTCGAATATGGATATAACAGCCAAGCTCCTCTTTGGCTTCCATGCAAAGTTGGTAGGTTTTACAGAGTGTTGAGGAAGATGGATGATGGCTTT
GATGTTCTCCATGGCCATGGAAGTCAAAAGCTTTACGGCTCTCATCATCTTTTTATCCCATCTCGTTGGATGGAATAA
Protein sequenceShow/hide protein sequence
MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGF
DVLHGHGSQKLYGSHHLFIPSRWME