; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15463 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15463
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnuclear transport factor 2
Genome locationCarg_Chr06:10115683..10117692
RNA-Seq ExpressionCarg15463
SyntenyCarg15463
Gene Ontology termsNA
InterPro domainsIPR002075 - Nuclear transport factor 2
IPR018222 - Nuclear transport factor 2, eukaryote
IPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145223.1 nuclear transport factor 2 [Momordica charantia]1.0e-6094.31Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANR+GLANLYQDNSMLTFEGQKIQG+QNIVAKLT LPFQQCQHSV+TVDCQPSGP+GGVLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIFRLNYA
        FHLMPTPQGSF+VLNDIFRLNYA
Subjt:  FHLMPTPQGSFYVLNDIFRLNYA

XP_022932693.1 nuclear transport factor 2B-like [Cucurbita moschata]8.9e-65100Show/hide
Query:  MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS
        MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS
Subjt:  MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS

Query:  QMFHLMPTPQGSFYVLNDIFRLNYA
        QMFHLMPTPQGSFYVLNDIFRLNYA
Subjt:  QMFHLMPTPQGSFYVLNDIFRLNYA

XP_022972136.1 nuclear transport factor 2B-like [Cucurbita maxima]2.6e-6499.2Show/hide
Query:  MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS
        MGMDPDAVAKAFVDHYYSTFDANR GLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS
Subjt:  MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS

Query:  QMFHLMPTPQGSFYVLNDIFRLNYA
        QMFHLMPTPQGSFYVLNDIFRLNYA
Subjt:  QMFHLMPTPQGSFYVLNDIFRLNYA

XP_022979987.1 nuclear transport factor 2B [Cucurbita maxima]9.2e-6296.75Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVDHYYSTFDANR+GLANLYQDNSMLTFEGQKIQGS NIVAKLTSLPFQQCQHSVSTVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIFRLNYA
        FHLMPTPQGSFYVLNDIFRLNYA
Subjt:  FHLMPTPQGSFYVLNDIFRLNYA

XP_023526029.1 nuclear transport factor 2B [Cucurbita pepo subsp. pepo]4.6e-6195.93Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVDHYYSTFDANR+GLANLYQD SMLTFEGQKIQGS NIVAKLTSLPFQQCQHSVSTVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIFRLNYA
        FHLMPTPQGSFYVLNDIFRLNYA
Subjt:  FHLMPTPQGSFYVLNDIFRLNYA

TrEMBL top hitse value%identityAlignment
A0A6J1CVD4 nuclear transport factor 24.9e-6194.31Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANR+GLANLYQDNSMLTFEGQKIQG+QNIVAKLT LPFQQCQHSV+TVDCQPSGP+GGVLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIFRLNYA
        FHLMPTPQGSF+VLNDIFRLNYA
Subjt:  FHLMPTPQGSFYVLNDIFRLNYA

A0A6J1F2G7 nuclear transport factor 2B-like4.3e-65100Show/hide
Query:  MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS
        MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS
Subjt:  MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS

Query:  QMFHLMPTPQGSFYVLNDIFRLNYA
        QMFHLMPTPQGSFYVLNDIFRLNYA
Subjt:  QMFHLMPTPQGSFYVLNDIFRLNYA

A0A6J1GVJ2 nuclear transport factor 2B6.4e-6195.12Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVDHYYSTFDANR+GLANLYQD SMLTFEGQKIQGS NIVAKLTSLPFQQCQHSVSTVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIFRLNYA
        FHL+PTPQGSFYVLNDIFRLNYA
Subjt:  FHLMPTPQGSFYVLNDIFRLNYA

A0A6J1I548 nuclear transport factor 2B-like1.3e-6499.2Show/hide
Query:  MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS
        MGMDPDAVAKAFVDHYYSTFDANR GLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS
Subjt:  MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS

Query:  QMFHLMPTPQGSFYVLNDIFRLNYA
        QMFHLMPTPQGSFYVLNDIFRLNYA
Subjt:  QMFHLMPTPQGSFYVLNDIFRLNYA

A0A6J1IQ79 nuclear transport factor 2B4.5e-6296.75Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVDHYYSTFDANR+GLANLYQDNSMLTFEGQKIQGS NIVAKLTSLPFQQCQHSVSTVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIFRLNYA
        FHLMPTPQGSFYVLNDIFRLNYA
Subjt:  FHLMPTPQGSFYVLNDIFRLNYA

SwissProt top hitse value%identityAlignment
Q75AA5 Nuclear transport factor 28.4e-3455.2Show/hide
Query:  MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS
        M MD  A+A+ F + YY+ FD +RS L NLY+D SMLTFE  ++QG+++IV KL SLPFQ+ QH ++T+D QP+ P+G VLV ++G+L +  EQ+A +FS
Subjt:  MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFS

Query:  QMFHLMPTPQGSFYVLNDIFRLNYA
        Q+FHLMP    S+YV NDIFRLNY+
Subjt:  QMFHLMPTPQGSFYVLNDIFRLNYA

Q96VN3 Nuclear transport factor 22.1e-3256.2Show/hide
Query:  DPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMF
        D  ++A+ FV  YY TFD NR+GLA LY+D+SMLTFE   IQG   I+ KLTSLPFQ+ QH VST+D QPSG  GG+LV V+G L +  E++ + ++Q F
Subjt:  DPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMF

Query:  HLMPTPQGSFYVLNDIFRLNY
         LMP   GS++VLND+FRL Y
Subjt:  HLMPTPQGSFYVLNDIFRLNY

Q9C7F5 Nuclear transport factor 2B1.1e-5786.18Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAV+KAFV+HYYSTFD NR GLA LYQ+ SMLTFEGQKIQG Q+IVAKLTSLPFQQC+H +STVDCQPSGP+ G+LVFVSGNLQLAGE+HALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIFRLNYA
        FHLMPTPQGSFYV NDIFRLNYA
Subjt:  FHLMPTPQGSFYVLNDIFRLNYA

Q9FZK4 Nuclear transport factor 2A2.3e-5583.74Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANR GL +LYQ+ SMLTFEGQKIQGSQNIVAKLT LPFQQC+H+++TVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIFRLNYA
        FHL+ + QG++YV NDIFRLNYA
Subjt:  FHLMPTPQGSFYVLNDIFRLNYA

Q9XJ54 Nuclear transport factor 22.5e-4166.39Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM
        MD DAVAKAFV+HYY TFD NR  L +LYQD SMLTFEGQ+  G+  I  KL SLPF QC H ++TVDCQPSGP GG+LVFVSG+L+   ++H LKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIFRLNY
        F L+P   G+FYV ND+FRLNY
Subjt:  FHLMPTPQGSFYVLNDIFRLNY

Arabidopsis top hitse value%identityAlignment
AT1G11570.1 NTF2-like4.6e-2758.25Show/hide
Query:  DAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPS---GPSGGVLVFVSGNLQLAGEQHALKFSQM
        + VA AFV+HYY  FD +RS L++LY   S+LTFEGQ I G  NI  KL  LPF QC H +STVD QPS   G  GG+LVFVSG++QL GE H L+FSQ+
Subjt:  DAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPS---GPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHL
        + L
Subjt:  FHL

AT1G11570.2 NTF2-like1.9e-3660.66Show/hide
Query:  DAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPS---GPSGGVLVFVSGNLQLAGEQHALKFSQM
        + VA AFV+HYY  FD +RS L++LY   S+LTFEGQ I G  NI  KL  LPF QC H +STVD QPS   G  GG+LVFVSG++QL GE H L+FSQ 
Subjt:  DAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPS---GPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIFRLNY
        FHL+P  QGSF+V N++FRLNY
Subjt:  FHLMPTPQGSFYVLNDIFRLNY

AT1G27310.1 nuclear transport factor 2A1.6e-5683.74Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANR GL +LYQ+ SMLTFEGQKIQGSQNIVAKLT LPFQQC+H+++TVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIFRLNYA
        FHL+ + QG++YV NDIFRLNYA
Subjt:  FHLMPTPQGSFYVLNDIFRLNYA

AT1G27970.1 nuclear transport factor 2B7.8e-5986.18Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAV+KAFV+HYYSTFD NR GLA LYQ+ SMLTFEGQKIQG Q+IVAKLTSLPFQQC+H +STVDCQPSGP+ G+LVFVSGNLQLAGE+HALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIFRLNYA
        FHLMPTPQGSFYV NDIFRLNYA
Subjt:  FHLMPTPQGSFYVLNDIFRLNYA

AT1G27970.2 nuclear transport factor 2B8.1e-5685.59Show/hide
Query:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAV+KAFV+HYYSTFD NR GLA LYQ+ SMLTFEGQKIQG Q+IVAKLTSLPFQQC+H +STVDCQPSGP+ G+LVFVSGNLQLAGE+HALKFSQM
Subjt:  MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFYVLNDIF
        FHLMPTPQGSFYV NDIF
Subjt:  FHLMPTPQGSFYVLNDIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATGGATCCCGACGCGGTGGCTAAGGCATTTGTCGATCATTATTACTCCACCTTCGACGCCAATCGAAGCGGTCTTGCTAATCTCTACCAGGACAATTCCATGTT
GACGTTTGAAGGTCAGAAGATCCAAGGCTCGCAGAATATTGTCGCCAAGCTCACTAGCCTTCCCTTCCAGCAGTGCCAACACTCCGTTAGCACCGTCGATTGCCAGCCTT
CTGGCCCTAGCGGTGGCGTTCTCGTCTTCGTCAGCGGCAATCTTCAACTCGCTGGAGAACAACATGCTCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAG
GGAAGCTTCTATGTGCTGAATGACATTTTCCGATTGAACTATGCCTGA
mRNA sequenceShow/hide mRNA sequence
CCTCGGCTCAAGCTGTCGTATCCAGGTTTTTCTCTGTAAAACTCTGCGTCGTTCTCAAGCAGGGCGGAGAAAAGTTGGTGTTTTTGCAGTTTACCGGCGGCAGAATCGAA
CGTTATGGGGATGGATCCCGACGCGGTGGCTAAGGCATTTGTCGATCATTATTACTCCACCTTCGACGCCAATCGAAGCGGTCTTGCTAATCTCTACCAGGACAATTCCA
TGTTGACGTTTGAAGGTCAGAAGATCCAAGGCTCGCAGAATATTGTCGCCAAGCTCACTAGCCTTCCCTTCCAGCAGTGCCAACACTCCGTTAGCACCGTCGATTGCCAG
CCTTCTGGCCCTAGCGGTGGCGTTCTCGTCTTCGTCAGCGGCAATCTTCAACTCGCTGGAGAACAACATGCTCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCC
ACAGGGAAGCTTCTATGTGCTGAATGACATTTTCCGATTGAACTATGCCTGAAGTTGAGATTAGTTCATGGCATTGGGAGGCCTGAAATGTGAGGTTATTCAACCAGTTT
GTTAATCACCCTTCAGTTTTTTTAGACATTTTAAATTGGAACTTGGATTATATCTTATCGTGCTTATGCTTCAAATTGTGTGCCTATGCAAGGTTGAATTTCTTGGTTGT
CATTGAGAATTGATGAAGTAGATTACTTTGTTCAAATTC
Protein sequenceShow/hide protein sequence
MGMDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQ
GSFYVLNDIFRLNYA