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Carg15515 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15515
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein RALF-like 32
Genome locationCarg_Chr06:9781671..9781931
RNA-Seq ExpressionCarg15515
SyntenyCarg15515
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650417.1 hypothetical protein Csa_010756 [Cucumis sativus]6.2e-2571.76Show/hide
Query:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S  SCN S+AE  NEEE+L++SE+ RRFLE+QKKYISI ALKKD  A +G+SGGQPY +S +CAPPP NPYNRGCSKI RCRSDD
Subjt:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

KAG6597606.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3997.67Show/hide
Query:  MSMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        MSMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISI ALKKDMIAFEGSSGGQP+PKSENCAPPPLNPYNRGCSKISRCRSDD
Subjt:  MSMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

KAG7029050.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-40100Show/hide
Query:  MSMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        MSMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
Subjt:  MSMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

XP_004147646.3 protein RALF-like 32 [Cucumis sativus]6.2e-2571.76Show/hide
Query:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S  SCN S+AE  NEEE+L++SE+ RRFLE+QKKYISI ALKKD  A +G+SGGQPY +S +CAPPP NPYNRGCSKI RCRSDD
Subjt:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

XP_023528073.1 protein RALF-like 32 [Cucurbita pepo subsp. pepo]3.1e-2470.59Show/hide
Query:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S  SCN S+AE G EEE L++SE+ RRFLE+QKKYISI ALKKD  A +G  GGQPY +S +CAPPP NPYNRGCSKI RCRSDD
Subjt:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

TrEMBL top hitse value%identityAlignment
A0A0A0L9A8 Uncharacterized protein1.5e-2470.59Show/hide
Query:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S  SCN S+A   NEEE+L++SE+ RRFLE+QKKYISI ALKKD  A +G+SGGQPY +S +CAPPP NPYNRGCSKI RCRSDD
Subjt:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

A0A5A7VKE5 Protein RALF-like 322.8e-2367.06Show/hide
Query:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S  SCN S+AE G+E+E+L++SE+ RRFL +QKKYISI ALKKD  A +G+SGG+PY KS +CAPPP NPY+RGC KI RCRSDD
Subjt:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

A0A6J1C8Z5 protein RALF-like 326.1e-1860.24Show/hide
Query:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRS
        SM+ CN S+AE   EEE+L++SE+ RRFLE+QKKYIS + LKKD  A +G   G+PY KSE+C PPP NPY+RGC  I RC+S
Subjt:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRS

A0A6J1C9Y4 protein RALF-like 322.4e-2267.47Show/hide
Query:  SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S CN S+AE   E+E+L++SE+ RRFLE+QKKYISI ALKKD  A +GS  GQPY KS +C PPP NPY+RGCSKI RCRSDD
Subjt:  SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

A0A6J1GXB3 protein RALF-like 327.4e-2469.41Show/hide
Query:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD
        S  SCN S+AE G E+E L++SE+ RRFL +QKKYISI ALKKD  A +G  GGQPY KS +CAPPP NPYNRGCSKI RCRSDD
Subjt:  SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

SwissProt top hitse value%identityAlignment
O23262 Protein RALF-like 321.9e-0840.45Show/hide
Query:  SMSSCNVSMAE-----HGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD
        S S CN S+AE        E  ++++S   +R  EEQ   +S  AL+++  A +G   G+ Y  S  C PPP NPY+RGCSK  RC  D
Subjt:  SMSSCNVSMAE-----HGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD

Q2HIM9 Protein RALF-like 315.7e-0537.14Show/hide
Query:  EEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD
        E+E L+ +E+ RR L  QK+YI  E L++DM+  +     +P     +C     N Y+RGC  I+RC  D
Subjt:  EEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD

Q945T0 Rapid alkalinization factor5.7e-0544.71Show/hide
Query:  SMSSCNVSMAE-HGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAP-PPLNPYNRGCSKISRCRS
        S   C  S+ E    EEE  + SE  RR L   KKYIS  AL+K+ +    S  G  Y    NC P    NPY+RGCS I+RCRS
Subjt:  SMSSCNVSMAE-HGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAP-PPLNPYNRGCSKISRCRS

Q9LK37 Protein RALF-like 245.7e-0539.73Show/hide
Query:  GNEE-ELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD
        G EE E ++ SE+ RR +  +K+YIS E L++DM+  +     +P      C     N YNRGCS I+RC  D
Subjt:  GNEE-ELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD

Q9SRY3 Protein RALF-like 12.3e-0644.44Show/hide
Query:  SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRS
        S C+ S+AE    EE  + SE+ RR L    KYIS ++LK++ +    S  G  Y   +N A    NPY+RGCSKI+RCRS
Subjt:  SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 11.6e-0744.44Show/hide
Query:  SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRS
        S C+ S+AE    EE  + SE+ RR L    KYIS ++LK++ +    S  G  Y   +N A    NPY+RGCSKI+RCRS
Subjt:  SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRS

AT3G05490.1 ralf-like 225.3e-0641.98Show/hide
Query:  SSCNVSMAE-HGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCR
        S C  S+AE    EEE+   S++ RR L  QKKYIS  A++++ +    S  G  Y   +  A    NPY+RGCS I+RCR
Subjt:  SSCNVSMAE-HGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCR

AT3G23805.1 ralf-like 244.0e-0639.73Show/hide
Query:  GNEE-ELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD
        G EE E ++ SE+ RR +  +K+YIS E L++DM+  +     +P      C     N YNRGCS I+RC  D
Subjt:  GNEE-ELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD

AT4G13950.1 ralf-like 314.0e-0637.14Show/hide
Query:  EEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD
        E+E L+ +E+ RR L  QK+YI  E L++DM+  +     +P     +C     N Y+RGC  I+RC  D
Subjt:  EEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD

AT4G14010.1 ralf-like 321.3e-0940.45Show/hide
Query:  SMSSCNVSMAE-----HGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD
        S S CN S+AE        E  ++++S   +R  EEQ   +S  AL+++  A +G   G+ Y  S  C PPP NPY+RGCSK  RC  D
Subjt:  SMSSCNVSMAE-----HGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATGAGTTCTTGCAATGTCTCAATGGCCGAGCATGGTAACGAAGAGGAGCTGTTAGTGCAATCTGAGATGGGTAGAAGGTTTCTCGAAGAACAGAAGAAATATAT
CTCCATTGAAGCTTTAAAGAAGGATATGATAGCTTTTGAGGGTAGCAGCGGAGGGCAACCTTACCCCAAAAGCGAAAACTGTGCTCCCCCACCTCTTAATCCGTACAACC
GAGGCTGCTCTAAAATATCTCGTTGTAGGTCTGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATGAGTTCTTGCAATGTCTCAATGGCCGAGCATGGTAACGAAGAGGAGCTGTTAGTGCAATCTGAGATGGGTAGAAGGTTTCTCGAAGAACAGAAGAAATATAT
CTCCATTGAAGCTTTAAAGAAGGATATGATAGCTTTTGAGGGTAGCAGCGGAGGGCAACCTTACCCCAAAAGCGAAAACTGTGCTCCCCCACCTCTTAATCCGTACAACC
GAGGCTGCTCTAAAATATCTCGTTGTAGGTCTGATGATTGA
Protein sequenceShow/hide protein sequence
MSMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD