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Carg15520 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15520
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr06:9759072..9759323
RNA-Seq ExpressionCarg15520
SyntenyCarg15520
Gene Ontology termsGO:0006897 - endocytosis (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582136.1 hypothetical protein SDJN03_22138, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2978.41Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSK-GGR--DEGYWDESGEIRRRMWPSDEDT--RWVAEPGIDRKASAFIARFYDARVSDPERQTLSV
        MGGRSKS+KCFSICSI KSCCF   GGR  DE YWDES EIRRRMWPSD+D+  RWVAEPGIDRKAS FIARFY++RVSD ERQT +V
Subjt:  MGGRSKSMKCFSICSIFKSCCFSK-GGR--DEGYWDESGEIRRRMWPSDEDT--RWVAEPGIDRKASAFIARFYDARVSDPERQTLSV

KAG6597601.1 hypothetical protein SDJN03_10781, partial [Cucurbita argyrosperma subsp. sororia]1.8e-37100Show/hide
Query:  MKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV
        MKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV
Subjt:  MKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV

KAG7029045.1 hypothetical protein SDJN02_10228, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-41100Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV
        MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV
Subjt:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV

XP_022138231.1 uncharacterized protein LOC111009454 [Momordica charantia]3.6e-3081.61Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSKGGR---DEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLSV
        MGGR KS KCFSICSI KSCCF  GGR   D GYWDES EIRRRMWPSDED  RWVAEPGIDRKASAFIARFY+ARVSDP+RQT +V
Subjt:  MGGRSKSMKCFSICSIFKSCCFSKGGR---DEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLSV

XP_022935735.1 uncharacterized protein LOC111442555 [Cucurbita moschata]3.5e-4198.8Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV
        MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTL+V
Subjt:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV

TrEMBL top hitse value%identityAlignment
A0A0A0LAW1 Uncharacterized protein2.0e-1876.47Show/hide
Query:  GGRDEG-------YWDESGEIRRRMWPSDED--TRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV
        GGRD G       + D+SGEIRRRMWPSDED  +RWVAEPGIDRKASAFIARFY+ARVSDPERQTLS+
Subjt:  GGRDEG-------YWDESGEIRRRMWPSDED--TRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV

A0A6J1C955 uncharacterized protein LOC1110094541.8e-3081.61Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSKGGR---DEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLSV
        MGGR KS KCFSICSI KSCCF  GGR   D GYWDES EIRRRMWPSDED  RWVAEPGIDRKASAFIARFY+ARVSDP+RQT +V
Subjt:  MGGRSKSMKCFSICSIFKSCCFSKGGR---DEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLSV

A0A6J1FBH6 uncharacterized protein LOC1114425551.7e-4198.8Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV
        MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTL+V
Subjt:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV

A0A7J6DWM0 Uncharacterized protein4.1e-1964.63Show/hide
Query:  GGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLS
        G  S S   FS+CS+F S CFS G RD+ Y +E   IRRR+ PS+ED   W+AEPGIDRKASAFIARFY++RVSDPERQTL+
Subjt:  GGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLS

A0A803Q4L5 Uncharacterized protein4.1e-1964.63Show/hide
Query:  GGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLS
        G  S S   FS+CS+F S CFS G RD+ Y +E   IRRR+ PS+ED   W+AEPGIDRKASAFIARFY++RVSDPERQTL+
Subjt:  GGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAFIARFYDARVSDPERQTLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48325.1 Expressed protein6.0e-0737.04Show/hide
Query:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESG--EIRRRMWPSDED-TRW-VAEPGIDRKASAFIARFYDARVSDPE
        MGG  +  K  S  S+ KS  F++  +++  W+E     +R R+  +D+D   W +AEP IDR+A+AFIA+F++  + D E
Subjt:  MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESG--EIRRRMWPSDED-TRW-VAEPGIDRKASAFIARFYDARVSDPE

AT3G05858.1 unknown protein2.7e-1558.82Show/hide
Query:  MGG--RSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTR-WVAEPGIDRKASAFIARFYDARVSDPERQTLS
        MGG  RS S K FS+ S FK+    +   D G WD+ G  R+ M  SDED R WVAEPGIDRKASAFIA+F+  RVS+ ERQTLS
Subjt:  MGG--RSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTR-WVAEPGIDRKASAFIARFYDARVSDPERQTLS

AT5G26620.1 unknown protein1.4e-1174.42Show/hide
Query:  RRMWPSDEDTR-WVAEPGIDRKASAFIARFYDARVSDPERQTL
        R+ W SDED R WVAEPGIDRKASAFIA+F+ +RVS+ ERQTL
Subjt:  RRMWPSDEDTR-WVAEPGIDRKASAFIARFYDARVSDPERQTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGAAGATCAAAGTCCATGAAATGCTTCTCAATTTGCAGCATCTTTAAGAGCTGTTGCTTTTCAAAGGGTGGAAGAGATGAAGGGTATTGGGATGAAAGTGGTGA
GATTAGGCGTAGGATGTGGCCTAGTGATGAAGATACAAGATGGGTGGCTGAGCCTGGGATTGATCGGAAAGCTTCTGCTTTTATTGCTAGATTCTATGACGCTCGTGTTT
CTGATCCCGAACGACAAACGCTTTCCGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGAAGATCAAAGTCCATGAAATGCTTCTCAATTTGCAGCATCTTTAAGAGCTGTTGCTTTTCAAAGGGTGGAAGAGATGAAGGGTATTGGGATGAAAGTGGTGA
GATTAGGCGTAGGATGTGGCCTAGTGATGAAGATACAAGATGGGTGGCTGAGCCTGGGATTGATCGGAAAGCTTCTGCTTTTATTGCTAGATTCTATGACGCTCGTGTTT
CTGATCCCGAACGACAAACGCTTTCCGTTTAG
Protein sequenceShow/hide protein sequence
MGGRSKSMKCFSICSIFKSCCFSKGGRDEGYWDESGEIRRRMWPSDEDTRWVAEPGIDRKASAFIARFYDARVSDPERQTLSV