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Carg15528 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15528
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationCarg_Chr11:10644496..10646691
RNA-Seq ExpressionCarg15528
SyntenyCarg15528
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581126.1 hypothetical protein SDJN03_21128, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3077.53Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN------PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG
        M+YPY + H PPETYPPPGY PPQPGYPG+      PPPPHQGYQ YFYDGY PSAP PPPPPGPPPPPY HQHYHYDDR++CSSFL G
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN------PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG

KAG7022631.1 hypothetical protein SDJN02_16365 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-74100Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKFSYTVLLLYVG
        MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKFSYTVLLLYVG
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKFSYTVLLLYVG

Query:  GVLGLFPIDVAKSVLFGLLGRAVFVSMIMKQCRFSSRLK
        GVLGLFPIDVAKSVLFGLLGRAVFVSMIMKQCRFSSRLK
Subjt:  GVLGLFPIDVAKSVLFGLLGRAVFVSMIMKQCRFSSRLK

XP_022928579.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]2.4e-42100Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG
        MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG

XP_022934109.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]5.5e-3180.23Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG
        M+YPY + H PPETYPPPGY PPQPGYPG+   PPPPHQGYQ YFYDGY PSAP PPPPPGPPPPPY HQHYHYDDR++CSSFL G
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG

XP_022989747.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]4.5e-4197.59Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG
        MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQ+YFYDGYQPSAPLPPPPPGPPPPPYHHQHY+YDDRDECSSFLRG
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG

TrEMBL top hitse value%identityAlignment
A0A5A7VHS2 Cysteine-rich and transmembrane domain-containing protein A-like7.7e-3179.31Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGW
        MSY Y ++H PPETYPPPGYPPPQPGYPG+   PPPPHQGYQ YFYDGYQPSA    PPP PPPPPYHHQHYHYDDR++CSSFL GW
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGW

A0A6J1EL88 cysteine-rich and transmembrane domain-containing protein WIH2-like1.1e-42100Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG
        MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG

A0A6J1F1N0 cysteine-rich and transmembrane domain-containing protein WIH2-like2.7e-3180.23Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG
        M+YPY + H PPETYPPPGY PPQPGYPG+   PPPPHQGYQ YFYDGY PSAP PPPPPGPPPPPY HQHYHYDDR++CSSFL G
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG

A0A6J1J313 cysteine-rich and transmembrane domain-containing protein WIH2-like2.7e-3180.23Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG
        M+YPY + H PPETYPPPGY PPQPGYPG+   PPPPHQGYQ YFYDGY PSAP PPPPPGPPPPPY HQHYHYDDR++CSSFL G
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG

A0A6J1JGP0 cysteine-rich and transmembrane domain-containing protein WIH2-like2.2e-4197.59Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG
        MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQ+YFYDGYQPSAPLPPPPPGPPPPPYHHQHY+YDDRDECSSFLRG
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12810.1 proline-rich family protein9.1e-0841.59Show/hide
Query:  SHHHTPPETYPPPGYPP--PQPGYPGNPPPP--------HQ---------------------GYQDYFYDGYQPSAPLPPPPPGPPPPPY---HHQHYHY
        S+   PPE+YPPPGY    P PGYP  PPPP        H+                     GYQ YF  G  P     PPPP PPP  Y   HH H+HY
Subjt:  SHHHTPPETYPPPGYPP--PQPGYPGNPPPP--------HQ---------------------GYQDYFYDGYQPSAPLPPPPPGPPPPPY---HHQHYHY

Query:  DDRDE-CSSFLRG
         D D  C SF+RG
Subjt:  DDRDE-CSSFLRG

AT1G12810.2 proline-rich family protein9.1e-0841.59Show/hide
Query:  SHHHTPPETYPPPGYPP--PQPGYPGNPPPP--------HQ---------------------GYQDYFYDGYQPSAPLPPPPPGPPPPPY---HHQHYHY
        S+   PPE+YPPPGY    P PGYP  PPPP        H+                     GYQ YF  G  P     PPPP PPP  Y   HH H+HY
Subjt:  SHHHTPPETYPPPGYPP--PQPGYPGNPPPP--------HQ---------------------GYQDYFYDGYQPSAPLPPPPPGPPPPPY---HHQHYHY

Query:  DDRDE-CSSFLRG
         D D  C SF+RG
Subjt:  DDRDE-CSSFLRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTACCCTTACAGCCACCACCATACGCCGCCTGAAACCTACCCTCCTCCCGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCTCCGCCGCCACATCAAGG
CTATCAAGACTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATC
GAGATGAATGCTCCTCCTTCCTTCGTGGATGGAAGAAAAGGAGGAAGTTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGTTTCCGATAGACGTT
GCGAAATCGGTGTTGTTCGGTTTGCTTGGCCGTGCAGTGTTCGTGTCTATGATTATGAAGCAGTGCCGGTTTTCGAGTCGCTTGAAATAA
mRNA sequenceShow/hide mRNA sequence
TTCTTCTTCTTCTTCTTCTTCCTCCTTCAATTTCCTCCGTCGTCCATTTCCATTTTGAGGGAAATTATGAGCTACCCTTACAGCCACCACCATACGCCGCCTGAAACCTA
CCCTCCTCCCGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCTCCGCCGCCACATCAAGGCTATCAAGACTATTTCTACGATGGCTATCAACCATCCGCACCGC
TTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGGAAGAAAAGGAGG
AAGTTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGTTTCCGATAGACGTTGCGAAATCGGTGTTGTTCGGTTTGCTTGGCCGTGCAGTGTTCGT
GTCTATGATTATGAAGCAGTGCCGGTTTTCGAGTCGCTTGAAATAAGATCTGTAGTTTTCAGGGTTGTTGTGTGTTTGTGTACACTTTCTGTGTTGTTTGATACCTAAAG
GCTCTCATTTACATGTATGTATACAATACCTAAATAAATAATGGTTTACACAAGTAAATTTTATGTGGAATCTTTGATGGTTTTGGAATTGGAATGTGGAAGCTACAAAT
ATGAGGATGATCGGGCCGAGGGCAGCCCGCTTTTTCCCGATCATTGTCTAGATAGTAACACATTAAGATGTCAATGCTTGGTAGTGAATACG
Protein sequenceShow/hide protein sequence
MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKFSYTVLLLYVGGVLGLFPIDV
AKSVLFGLLGRAVFVSMIMKQCRFSSRLK