; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15531 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15531
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionC2H2-like zinc finger protein
Genome locationCarg_Chr11:10667912..10668397
RNA-Seq ExpressionCarg15531
SyntenyCarg15531
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588875.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]1.3e-8199.38Show/hide
Query:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP
        MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSR PPPPPPTTYHHLASP
Subjt:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP

Query:  STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL
        STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL
Subjt:  STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL

KAG7022634.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-83100Show/hide
Query:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP
        MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP
Subjt:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP

Query:  STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL
        STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL
Subjt:  STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL

XP_022928226.1 protein LATE FLOWERING-like [Cucurbita moschata]3.4e-7795.65Show/hide
Query:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP
        MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSR PPPPPPTTYHHLASP
Subjt:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP

Query:  STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL
        STTALAPSALFDEHWFHQNNHYRGTTTT      ASASPNDLSPNADAAVEHVTIDLTLRL
Subjt:  STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL

XP_022989523.1 protein LATE FLOWERING-like [Cucurbita maxima]3.4e-7795.65Show/hide
Query:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP
        MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK FTSEILHLGSLQHSR PPPPPPTTYHHLASP
Subjt:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP

Query:  STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL
        S TALAPSALFDEHWFHQNNHYRGTTTT    ASASASPNDLSPNADAAVEHVTIDLTLRL
Subjt:  STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL

XP_023530190.1 zinc finger protein 7-like [Cucurbita pepo subsp. pepo]3.8e-7694.48Show/hide
Query:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP
        MADPAIYDFLSQT ASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL HSR  PPPPPTTYHHLASP
Subjt:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP

Query:  STTALAPSALFDEHWFHQNNHYRGTTTT--ASASASASASPNDLSPNADAAVEHVTIDLTLRL
        S TA APS LFDEHWFHQNNHYRGTTTT  ASASASASASPNDLSPNADAAVEHVTIDLTLRL
Subjt:  STTALAPSALFDEHWFHQNNHYRGTTTT--ASASASASASPNDLSPNADAAVEHVTIDLTLRL

TrEMBL top hitse value%identityAlignment
A0A6J1DQT0 zinc finger protein 67.6e-3864.42Show/hide
Query:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP
        MADPAIYDFLSQTT     PK  SRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK F S++LH         PPPPPP+     ASP
Subjt:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP

Query:  STTALAPSALFDEHW--FHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL
        +  A    +  DEHW   HQN+H        +A +SAS   + LSPNAD AVE+VTIDLTLRL
Subjt:  STTALAPSALFDEHW--FHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL

A0A6J1EJQ6 protein LATE FLOWERING-like1.7e-7795.65Show/hide
Query:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP
        MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSR PPPPPPTTYHHLASP
Subjt:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP

Query:  STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL
        STTALAPSALFDEHWFHQNNHYRGTTTT      ASASPNDLSPNADAAVEHVTIDLTLRL
Subjt:  STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL

A0A6J1F843 protein LATE FLOWERING-like2.9e-5373.84Show/hide
Query:  MADPAIYDFLSQ-TTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPP--PTTYHHL
        MADPAIYDFL+Q TTASNS PK  SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGSL    PPPPPP   TT+HHL
Subjt:  MADPAIYDFLSQ-TTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPP--PTTYHHL

Query:  ASPSTTA--------LAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL
          P T A         AP+    +HWF+QN++   TTTT  ASASASASP+ LSPNAD AVEHVTIDLTLRL
Subjt:  ASPSTTA--------LAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL

A0A6J1J5R2 protein LATE FLOWERING-like1.1e-4971.6Show/hide
Query:  MADPAIYDFLSQ-TTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPT-TYHHLA
        MADPAIYDFL+Q TTASNS PK  SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGSL    PP P   T T+HHL 
Subjt:  MADPAIYDFLSQ-TTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPT-TYHHLA

Query:  SPSTTALAPSA------LFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL
         P T A AP+          +HWF+QN++   TTTT   +ASASASP+ LSPN D AVEHVTIDLTLRL
Subjt:  SPSTTALAPSA------LFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL

A0A6J1JQI7 protein LATE FLOWERING-like1.7e-7795.65Show/hide
Query:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP
        MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK FTSEILHLGSLQHSR PPPPPPTTYHHLASP
Subjt:  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASP

Query:  STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL
        S TALAPSALFDEHWFHQNNHYRGTTTT    ASASASPNDLSPNADAAVEHVTIDLTLRL
Subjt:  STTALAPSALFDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL

SwissProt top hitse value%identityAlignment
Q39263 Zinc finger protein 41.6e-0852.46Show/hide
Query:  LSQTTASNSVPKTTSRKSQSQYS-SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        L+   +S S      ++ Q Q S S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  LSQTTASNSVPKTTSRKSQSQYS-SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

Q39266 Zinc finger protein 73.2e-0951.61Show/hide
Query:  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL--QHSRP
        KS    ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A     +H+G +   H RP
Subjt:  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL--QHSRP

Q42485 Zinc finger protein 11.6e-0863.41Show/hide
Query:  QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK
        Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Subjt:  QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK

Q9FFX4 Zinc finger protein KNUCKLES2.4e-1257.14Show/hide
Query:  SNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRP
        + S  K  S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG L +S P
Subjt:  SNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRP

Q9FKA9 Protein LATE FLOWERING9.9e-1144.09Show/hide
Query:  PKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGSLQHSRPPPPPPPTTYHHLASPSTTALAPSALF
        P   + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A  + + ++     H+ P     P + HHL      A A  A F
Subjt:  PKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGSLQHSRPPPPPPPTTYHHLASPSTTALAPSALF

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 72.3e-1051.61Show/hide
Query:  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL--QHSRP
        KS    ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A     +H+G +   H RP
Subjt:  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL--QHSRP

AT1G66140.1 zinc finger protein 41.1e-0952.46Show/hide
Query:  LSQTTASNSVPKTTSRKSQSQYS-SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        L+   +S S      ++ Q Q S S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  LSQTTASNSVPKTTSRKSQSQYS-SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

AT1G80730.1 zinc-finger protein 11.1e-0963.41Show/hide
Query:  QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK
        Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Subjt:  QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein1.7e-1357.14Show/hide
Query:  SNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRP
        + S  K  S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG L +S P
Subjt:  SNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRP

AT5G48890.1 C2H2-like zinc finger protein7.0e-1244.09Show/hide
Query:  PKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGSLQHSRPPPPPPPTTYHHLASPSTTALAPSALF
        P   + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A  + + ++     H+ P     P + HHL      A A  A F
Subjt:  PKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGSLQHSRPPPPPPPTTYHHLASPSTTALAPSALF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACCCTGCCATTTACGACTTCCTTAGCCAAACGACTGCTTCAAATTCTGTACCGAAAACGACCTCCAGAAAATCTCAGTCTCAATACTCTTCCTCACGCATTTT
TCCATGCCTTTACTGTCCTCGAAAATTCTACACTTCCCAAGCCCTAGGCGGCCACCAAAATGCTCACAAAAGAGAACGAGCAGCTTCGCGTAAGGCCTTCACCTCTGAAA
TTCTTCACCTCGGTTCGCTTCAACACTCGAGGCCACCGCCGCCGCCGCCGCCGACTACTTACCACCATCTTGCATCGCCGTCTACTACAGCACTGGCTCCGTCGGCGCTT
TTTGACGAGCATTGGTTCCACCAGAATAATCACTACCGAGGTACTACCACTACAGCCTCCGCCTCCGCCTCCGCCTCCGCCTCGCCGAACGATCTCTCACCGAATGCTGA
TGCTGCCGTCGAACACGTAACCATCGATCTCACTCTTCGCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACCCTGCCATTTACGACTTCCTTAGCCAAACGACTGCTTCAAATTCTGTACCGAAAACGACCTCCAGAAAATCTCAGTCTCAATACTCTTCCTCACGCATTTT
TCCATGCCTTTACTGTCCTCGAAAATTCTACACTTCCCAAGCCCTAGGCGGCCACCAAAATGCTCACAAAAGAGAACGAGCAGCTTCGCGTAAGGCCTTCACCTCTGAAA
TTCTTCACCTCGGTTCGCTTCAACACTCGAGGCCACCGCCGCCGCCGCCGCCGACTACTTACCACCATCTTGCATCGCCGTCTACTACAGCACTGGCTCCGTCGGCGCTT
TTTGACGAGCATTGGTTCCACCAGAATAATCACTACCGAGGTACTACCACTACAGCCTCCGCCTCCGCCTCCGCCTCCGCCTCGCCGAACGATCTCTCACCGAATGCTGA
TGCTGCCGTCGAACACGTAACCATCGATCTCACTCTTCGCTTATGA
Protein sequenceShow/hide protein sequence
MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASPSTTALAPSAL
FDEHWFHQNNHYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL