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Carg15544 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15544
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMembrane-anchored ubiquitin-fold protein
Genome locationCarg_Chr11:10732014..10734521
RNA-Seq ExpressionCarg15544
SyntenyCarg15544
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR029071 - Ubiquitin-like domain superfamily
IPR039540 - UBL3-like, ubiquitin domain
IPR040015 - UBL3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022647.1 Membrane-anchored ubiquitin-fold protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-95100Show/hide
Query:  MLLRFMRIGTHDKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIARKLEARIKPASQPASQPASQPSGET
        MLLRFMRIGTHDKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIARKLEARIKPASQPASQPASQPSGET
Subjt:  MLLRFMRIGTHDKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIARKLEARIKPASQPASQPASQPSGET

Query:  EMCKRNGGINLILRFVCQLSELSSDSTYCYSFSAISVWSLEHGLKVWSFESDSSSCLFAVEKEKQQATGSELCNGVPFIE
        EMCKRNGGINLILRFVCQLSELSSDSTYCYSFSAISVWSLEHGLKVWSFESDSSSCLFAVEKEKQQATGSELCNGVPFIE
Subjt:  EMCKRNGGINLILRFVCQLSELSSDSTYCYSFSAISVWSLEHGLKVWSFESDSSSCLFAVEKEKQQATGSELCNGVPFIE

XP_022156522.1 membrane-anchored ubiquitin-fold protein 4-like [Momordica charantia]3.5e-2291.8Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV
        DKKVVPKAANDIKLINAGK+LENNKTVGQCRVPFGELPRGVITMHVVVQP+IAKAKT + V
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV

XP_022928244.1 membrane-anchored ubiquitin-fold protein 4-like [Cucurbita moschata]3.5e-2291.8Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV
        DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQP+IAKAKT + +
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV

XP_023530926.1 membrane-anchored ubiquitin-fold protein 4-like [Cucurbita pepo subsp. pepo]7.9e-2290.16Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV
        DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFG+LPRGVITMHVVVQP+IAKAKT + +
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV

XP_028785389.1 membrane-anchored ubiquitin-fold protein 3-like isoform X2 [Prosopis alba]1.0e-2181.82Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIARK
        DKK+VPKAAND+KLINAGK+LENNKTVGQC+VPFG+LPRGVITMHVVVQPS+AKAKT + V  A K
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIARK

TrEMBL top hitse value%identityAlignment
A0A2I4FR31 Membrane-anchored ubiquitin-fold protein1.1e-2184.38Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIA
        DKK+VPK AND+KLINAGKVLENNKTVGQCRVPFGELPRGVITMH VVQPS+AKAKT + V  A
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIA

A0A5N6QUX2 Membrane-anchored ubiquitin-fold protein8.5e-2285.94Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIA
        DKK+VPK ANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMH VVQPS+AKAKT + V  A
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIA

A0A6J1DS77 Membrane-anchored ubiquitin-fold protein1.7e-2291.8Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV
        DKKVVPKAANDIKLINAGK+LENNKTVGQCRVPFGELPRGVITMHVVVQP+IAKAKT + V
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV

A0A6J1ER66 Membrane-anchored ubiquitin-fold protein1.7e-2291.8Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV
        DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQP+IAKAKT + +
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV

A0A6J1JL00 Membrane-anchored ubiquitin-fold protein8.5e-2288.52Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV
        DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQP++A AKT + +
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV

SwissProt top hitse value%identityAlignment
Q6Z8K4 Membrane-anchored ubiquitin-fold protein 31.4e-1366Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQP
        DK++ PK  ND+KLINAG++LENN+T+ + RVP GE+P GVITMHVVV+P
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQP

Q7XRU4 Membrane-anchored ubiquitin-fold protein 43.9e-1661.29Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVS
        DK +VPK AND+KLI+ GK+LEN+K + QCR PFG+LP   ITMHVVVQPS AK+K  +  +
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVS

Q8LCS8 Membrane-anchored ubiquitin-fold protein 29.4e-1051.85Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAK
        DK+  PK   D+KLI+AG++LENNKTVG CR P G     V TMHV++Q  + +
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAK

Q9LSD8 Membrane-anchored ubiquitin-fold protein 42.3e-1665.57Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV
        DKK+VPK+A+DIKLINAGK+LEN KTV QC+ PF +LP+ VITMHVVVQ S  KA+  + +
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV

Q9SW27 Membrane-anchored ubiquitin-fold protein 32.1e-1764.62Show/hide
Query:  KKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIARK
        K VVPK  N++KLI++GK+LENNKTVGQC+ PFG++  GVI MHVVVQPS+AK+KT + V  A K
Subjt:  KKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIARK

Arabidopsis top hitse value%identityAlignment
AT1G22050.1 membrane-anchored ubiquitin-fold protein 6 precursor6.7e-1154.55Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQ-PSIAK
        DK+  PK  ND+KLINAGK+LENN+T+ + R+P  ELP  +ITMH+V++ P++ K
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQ-PSIAK

AT3G26980.1 membrane-anchored ubiquitin-fold protein 4 precursor1.6e-1765.57Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV
        DKK+VPK+A+DIKLINAGK+LEN KTV QC+ PF +LP+ VITMHVVVQ S  KA+  + +
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSV

AT4G24990.1 Ubiquitin family protein1.5e-1864.62Show/hide
Query:  KKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIARK
        K VVPK  N++KLI++GK+LENNKTVGQC+ PFG++  GVI MHVVVQPS+AK+KT + V  A K
Subjt:  KKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIARK

AT5G15460.1 membrane-anchored ubiquitin-fold protein 26.7e-1151.85Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAK
        DK+  PK   D+KLI+AG++LENNKTVG CR P G     V TMHV++Q  + +
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAK

AT5G15460.2 membrane-anchored ubiquitin-fold protein 26.7e-1151.85Show/hide
Query:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAK
        DK+  PK   D+KLI+AG++LENNKTVG CR P G     V TMHV++Q  + +
Subjt:  DKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTACGCTTTATGCGTATTGGCACGCATGATAAGAAAGTTGTACCCAAGGCAGCAAATGACATAAAACTGATAAATGCTGGTAAGGTTTTAGAAAACAACAAGAC
TGTTGGTCAATGTCGAGTGCCTTTCGGGGAGCTGCCTAGAGGAGTTATCACTATGCATGTTGTGGTGCAGCCAAGTATAGCAAAAGCAAAAACAGGAAGGTCGGTATCAA
TCGCTAGGAAGCTTGAAGCGAGGATAAAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCTAGTGGGGAAACAGAAATGTGTAAAAGAAATGGGGGGATCAAC
TTGATCCTGAGATTTGTATGTCAACTGTCTGAACTCAGCTCGGACTCCACCTACTGCTATAGTTTTTCTGCTATTAGTGTATGGAGTCTTGAGCATGGTCTGAAGGTGTG
GTCTTTTGAATCTGATTCAAGTTCTTGTCTGTTTGCTGTAGAAAAAGAAAAACAACAGGCAACAGGTTCTGAGTTGTGTAATGGAGTTCCATTTATAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTTACGCTTTATGCGTATTGGCACGCATGATAAGAAAGTTGTACCCAAGGCAGCAAATGACATAAAACTGATAAATGCTGGTAAGGTTTTAGAAAACAACAAGAC
TGTTGGTCAATGTCGAGTGCCTTTCGGGGAGCTGCCTAGAGGAGTTATCACTATGCATGTTGTGGTGCAGCCAAGTATAGCAAAAGCAAAAACAGGAAGGTCGGTATCAA
TCGCTAGGAAGCTTGAAGCGAGGATAAAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCTAGTGGGGAAACAGAAATGTGTAAAAGAAATGGGGGGATCAAC
TTGATCCTGAGATTTGTATGTCAACTGTCTGAACTCAGCTCGGACTCCACCTACTGCTATAGTTTTTCTGCTATTAGTGTATGGAGTCTTGAGCATGGTCTGAAGGTGTG
GTCTTTTGAATCTGATTCAAGTTCTTGTCTGTTTGCTGTAGAAAAAGAAAAACAACAGGCAACAGGTTCTGAGTTGTGTAATGGAGTTCCATTTATAGAATGA
Protein sequenceShow/hide protein sequence
MLLRFMRIGTHDKKVVPKAANDIKLINAGKVLENNKTVGQCRVPFGELPRGVITMHVVVQPSIAKAKTGRSVSIARKLEARIKPASQPASQPASQPSGETEMCKRNGGIN
LILRFVCQLSELSSDSTYCYSFSAISVWSLEHGLKVWSFESDSSSCLFAVEKEKQQATGSELCNGVPFIE