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Carg15556 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15556
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein, putative
Genome locationCarg_Chr11:10807437..10811081
RNA-Seq ExpressionCarg15556
SyntenyCarg15556
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588894.1 hypothetical protein SDJN03_17459, partial [Cucurbita argyrosperma subsp. sororia]4.7e-29100Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
        MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
KAG7022659.1 hypothetical protein SDJN02_16393 [Cucurbita argyrosperma subsp. argyrosperma]4.7e-29100Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
        MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
XP_022935264.1 uncharacterized protein LOC111442202 [Cucurbita moschata]2.2e-2694.67Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
        MALTNFILTVAGV AVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELE+KT  KDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
XP_023531886.1 uncharacterized protein LOC111794015 [Cucurbita pepo subsp. pepo]1.1e-2898.67Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
        MALTNFILTVAGVSAVV+LLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
XP_038899134.1 uncharacterized protein LOC120086491 [Benincasa hispida]7.5e-2796Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
        MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELE+KT  KDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
TrEMBL top hitse value%identityAlignment
A0A6J1DS71 uncharacterized protein LOC1110234003.1e-2692Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
        MALTNFILTVAGVSAV+LLLRSDVKQSASIFRRNVKHIRQW+EEESASASKTVEKATKELE+K   KDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
A0A6J1FA54 uncharacterized protein LOC1114422021.1e-2694.67Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
        MALTNFILTVAGV AVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELE+KT  KDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
A0A6J1J664 uncharacterized protein LOC1114821241.1e-2694.67Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
        MALTNFILTVAGV AVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELE+KT  KDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
I1N7U0 Uncharacterized protein3.2e-2385.53Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKAT-KELESKTPHKDIPKDDKH
        M LTNF+LTVAGVSAVVLLLRSDVKQSASIFRRNVKHIR WLEEESA++SKT+EK+T KELESK P KDIPK+DKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKAT-KELESKTPHKDIPKDDKH
I3SQG6 Uncharacterized protein6.4e-2484Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
        M +TNF+LTVAGVSAVVLLLRSDVKQSASIFRRNVKHIR+WLEEE+ S+SKTVEK+TKELE+K P KDIPK+DKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G14105.1 unknown protein1.4e-1867.57Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKA--TKELESKTPHKDIPKD
        M LTNFILTVAGV AVV+LLRSDVKQS ++ RRNVKHIR WLEEES++AS    ++   KE+E K P KDIPK+
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKA--TKELESKTPHKDIPKD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGACGAACTTCATCTTGACGGTGGCTGGAGTTAGTGCCGTGGTTCTTCTTTTGAGGAGCGATGTGAAACAATCGGCTTCTATTTTCCGGCGCAACGTCAAGCA
CATCCGCCAGTGGCTCGAAGAAGAATCTGCCTCTGCCTCCAAGACTGTGGAGAAAGCAACTAAGGAGCTGGAATCCAAGACTCCTCATAAAGATATTCCCAAAGATGACA
AGCATTAA
mRNA sequenceShow/hide mRNA sequence
AATCGATACATTTCTTCCCTATTCATTTGCTCCACGACGGGTAACCAGCGAGTAGGATTCTGTGTTTTGCTTCGTCTGAGTGTTGGGATTGAACCGAAGGTTGAAGGATT
TGAATTGATGGCTTTGACGAACTTCATCTTGACGGTGGCTGGAGTTAGTGCCGTGGTTCTTCTTTTGAGGAGCGATGTGAAACAATCGGCTTCTATTTTCCGGCGCAACG
TCAAGCACATCCGCCAGTGGCTCGAAGAAGAATCTGCCTCTGCCTCCAAGACTGTGGAGAAAGCAACTAAGGAGCTGGAATCCAAGACTCCTCATAAAGATATTCCCAAA
GATGACAAGCATTAATGTGAATATTGGTTAAATAGCAACGTGAACCTCTTATCGTGTCAATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCC
Protein sequenceShow/hide protein sequence
MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTPHKDIPKDDKH