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Carg15557 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15557
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:10816009..10816411
RNA-Seq ExpressionCarg15557
SyntenyCarg15557
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042928.1 hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa]8.0e-1766.2Show/hide
Query:  MPFYKQYKGTKTKPTGLVGYVFHRD---YAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGID
        MPFYKQY G+KTK TGLVGYVFHR+      S HN+ALLV +NP  DT  TR SL+Q D  YGIVADEG+D
Subjt:  MPFYKQYKGTKTKPTGLVGYVFHRD---YAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGID
KAE8650773.1 hypothetical protein Csa_017653 [Cucumis sativus]3.4e-0739.42Show/hide
Query:  MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGIDKYCLLRWLVVRFNDLLSTRLCMFVLLFLVNNL
        MPFYKQY G+KTK TGL                     ++PG DT  TRDSL+QFD  YGI+ADEG+D         V+  + +S+ L  F  L  + + 
Subjt:  MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGIDKYCLLRWLVVRFNDLLSTRLCMFVLLFLVNNL

Query:  VDLS
        ++LS
Subjt:  VDLS
KAG6588895.1 hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3198.53Show/hide
Query:  MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGID
        MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFD+LYGIVADEGID
Subjt:  MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGID
KAG7022660.1 hypothetical protein SDJN02_16394, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-57100Show/hide
Query:  MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGIDKYCLLRWLVVRFNDLLSTRLCMFVLLFLVNNL
        MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGIDKYCLLRWLVVRFNDLLSTRLCMFVLLFLVNNL
Subjt:  MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGIDKYCLLRWLVVRFNDLLSTRLCMFVLLFLVNNL

Query:  VDLSIAHEWQI
        VDLSIAHEWQI
Subjt:  VDLSIAHEWQI
TrEMBL top hitse value%identityAlignment
A0A0A0LVE7 Uncharacterized protein1.6e-1850.94Show/hide
Query:  MPFYKQYKGTKTKPTGLVGYVFHRD--YAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGIDKYCLLRWLVVRFNDLLSTRLCMFVLLFLVN
        MPFYKQY G+KTK TGLVGYVFHR+   ++S HN+ LLV ++PG DT  TRDSL+QFD  YGI+ADEG+D         V+  + +S+ L  F  L  + 
Subjt:  MPFYKQYKGTKTKPTGLVGYVFHRD--YAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGIDKYCLLRWLVVRFNDLLSTRLCMFVLLFLVN

Query:  NLVDLS
        + ++LS
Subjt:  NLVDLS
A0A5D3C0J6 Uncharacterized protein3.9e-1766.2Show/hide
Query:  MPFYKQYKGTKTKPTGLVGYVFHRD---YAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGID
        MPFYKQY G+KTK TGLVGYVFHR+      S HN+ALLV +NP  DT  TR SL+Q D  YGIVADEG+D
Subjt:  MPFYKQYKGTKTKPTGLVGYVFHRD---YAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGID
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTCTACAAGCAATACAAAGGGACCAAAACAAAGCCAACTGGTTTGGTTGGCTATGTCTTCCACCGGGACTATGCTATTTCTCCACACAACGTTGCTTTGTTGGT
GCACGAGAACCCCGGCCCCGACACGGCGGTGACTCGGGACTCCTTGACTCAGTTCGATAGCCTGTATGGAATTGTCGCCGATGAAGGTATCGATAAATACTGTCTCCTCC
GTTGGCTCGTCGTGAGATTTAATGACTTGTTGAGTACTCGTCTTTGTATGTTTGTATTGTTATTCTTAGTTAATAATTTAGTTGACTTGAGCATAGCTCACGAATGGCAG
ATT
mRNA sequenceShow/hide mRNA sequence
ATGCCTTTCTACAAGCAATACAAAGGGACCAAAACAAAGCCAACTGGTTTGGTTGGCTATGTCTTCCACCGGGACTATGCTATTTCTCCACACAACGTTGCTTTGTTGGT
GCACGAGAACCCCGGCCCCGACACGGCGGTGACTCGGGACTCCTTGACTCAGTTCGATAGCCTGTATGGAATTGTCGCCGATGAAGGTATCGATAAATACTGTCTCCTCC
GTTGGCTCGTCGTGAGATTTAATGACTTGTTGAGTACTCGTCTTTGTATGTTTGTATTGTTATTCTTAGTTAATAATTTAGTTGACTTGAGCATAGCTCACGAATGGCAG
ATT
Protein sequenceShow/hide protein sequence
MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDSLYGIVADEGIDKYCLLRWLVVRFNDLLSTRLCMFVLLFLVNNLVDLSIAHEWQ
I