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Carg15580 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15580
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description54S ribosomal protein L37, mitochondrial-like
Genome locationCarg_Chr11:10929076..10930862
RNA-Seq ExpressionCarg15580
SyntenyCarg15580
Gene Ontology termsGO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR013870 - Ribosomal protein L37, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022683.1 hypothetical protein SDJN02_16417 [Cucurbita argyrosperma subsp. argyrosperma]6.2e-64100Show/hide
Query:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
Subjt:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
        RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
XP_022928329.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita moschata]3.8e-6197.76Show/hide
Query:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        MAMSQIRLVRRSLLN+K DLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSEL+
Subjt:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
        RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
XP_022989738.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima]6.0e-5997.01Show/hide
Query:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        MAMSQIRL RRSLLN+K DLIKLTNVRTFAAGGKKKGSK GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
Subjt:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
        RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
XP_023530063.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita pepo subsp. pepo]1.4e-6399.25Show/hide
Query:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        MAMSQIRLVRRSLLN+KEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
Subjt:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
        RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
XP_038883607.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida]1.6e-4880.6Show/hide
Query:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        M MSQIRL RRS++NSK DLI+LT+VRTFAAGGK K    GGAA DAPKAS LSKEVKSTTVVGANILKEGADPK+MADSEYP WLW L+DK P LSELR
Subjt:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
        RK+ +TLPY DLKRFVKLDTRA+IKENNS+KAKN
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
TrEMBL top hitse value%identityAlignment
A0A1S3B544 54S ribosomal protein L37, mitochondrial isoform X24.3e-4776.69Show/hide
Query:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        M +SQIR  RR+++ S +DLI+LT+VR+FAAGGK K    GGAA DAPKASILSKEVKSTTVVGANILKEGADPK+MADSEYP WLW L+DK P LSELR
Subjt:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAK
        RK+A++LPY DL+RFVKLDTRARIKENNS KAK
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAK
A0A5D3CXE8 39S ribosomal protein L544.3e-4776.69Show/hide
Query:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        M +SQIR  RR+++ S +DLI+LT+VR+FAAGGK K    GGAA DAPKASILSKEVKSTTVVGANILKEGADPK+MADSEYP WLW L+DK P LSELR
Subjt:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAK
        RK+A++LPY DL+RFVKLDTRARIKENNS KAK
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAK
A0A6J1DJG1 54S ribosomal protein L37, mitochondrial-like1.4e-4883.58Show/hide
Query:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        MAMSQ RL  RS++N+K D IK+T+VRTFAAGGKKKGSK GGAA D PKASILSKEVKS+TVVGANILKEGADPKVMADSEYPDWLWRLIDK PALSELR
Subjt:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
        RK+ + LPYEDLKRFVKLD RA IKENNS KAKN
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
A0A6J1EKI4 54S ribosomal protein L37, mitochondrial-like1.8e-6197.76Show/hide
Query:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        MAMSQIRLVRRSLLN+K DLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSEL+
Subjt:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
        RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
A0A6J1JQ61 54S ribosomal protein L37, mitochondrial-like2.9e-5997.01Show/hide
Query:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        MAMSQIRL RRSLLN+K DLIKLTNVRTFAAGGKKKGSK GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
Subjt:  MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
        RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
SwissProt top hitse value%identityAlignment
Q9CPW3 39S ribosomal protein L54, mitochondrial7.5e-0439.39Show/hide
Query:  NVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTT-VVGANILKEGADPKVMADSEYPDWLWRL
        ++R +A     KG KGG AA       + +   + TT  +G NI KEG D  + ADSEYP WL+++
Subjt:  NVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTT-VVGANILKEGADPKVMADSEYPDWLWRL
Arabidopsis top hitse value%identityAlignment
AT3G01740.1 Mitochondrial ribosomal protein L371.0e-4066.42Show/hide
Query:  MSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGK--KKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        M++I L+R S   S +D+++    RTFAA     KKG KGGG A+DAPK S L+KE+KSTTVVGAN LK+G+DPK++ DS+YPDWLW L+DKRPALSELR
Subjt:  MSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGK--KKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
        RK+ +TLPY+DLKRFVKLDTR +IKENNS KAKN
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
AT5G14290.1 Mitochondrial ribosomal protein L373.2e-3460.15Show/hide
Query:  MSQIRLVRRSLLNSKEDLIKLTNVRTFA-AGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRR
        M+ IR+   S+  SK D+++    RTFA A GK K    G    DAPKAS LSKE+KS+ VV AN LK+G DPK++ +S++PD+LW L+DKRPALSELRR
Subjt:  MSQIRLVRRSLLNSKEDLIKLTNVRTFA-AGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRR

Query:  KDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN
        K+ +TL ++DLKRFVKLDTRARIKEN+S KAKN
Subjt:  KDAKTLPYEDLKRFVKLDTRARIKENNSSKAKN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGAGCCAAATTAGATTGGTTAGAAGAAGCCTTCTGAATAGCAAAGAAGATCTGATAAAACTGACAAATGTTCGAACATTTGCTGCTGGGGGCAAAAAGAAGGG
TTCTAAAGGAGGGGGTGCGGCTACTGATGCTCCGAAAGCATCAATTCTAAGTAAAGAGGTCAAATCTACCACTGTAGTTGGTGCCAATATTCTTAAGGAAGGTGCAGATC
CAAAAGTCATGGCAGATTCGGAGTACCCTGATTGGCTGTGGCGTTTGATCGATAAGCGTCCAGCTCTTAGTGAATTACGAAGGAAGGATGCCAAAACGCTTCCCTATGAG
GATCTCAAGCGCTTTGTTAAGTTGGATACTCGAGCAAGGATTAAGGAAAACAACTCTAGTAAGGCGAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
AGAAGAGTCCGTAGTGTAAGCCCTAAGTTCTAACTGTGTGTAAGGTGCATCTCTTTTTCTCCATTGCCGAACTCCGATTCTCATTCTCAATCTCCGCCATTTCTGTTGCT
TTCTTCTCCGTCAACTACAGAAGAAAAAATGGCTATGAGCCAAATTAGATTGGTTAGAAGAAGCCTTCTGAATAGCAAAGAAGATCTGATAAAACTGACAAATGTTCGAA
CATTTGCTGCTGGGGGCAAAAAGAAGGGTTCTAAAGGAGGGGGTGCGGCTACTGATGCTCCGAAAGCATCAATTCTAAGTAAAGAGGTCAAATCTACCACTGTAGTTGGT
GCCAATATTCTTAAGGAAGGTGCAGATCCAAAAGTCATGGCAGATTCGGAGTACCCTGATTGGCTGTGGCGTTTGATCGATAAGCGTCCAGCTCTTAGTGAATTACGAAG
GAAGGATGCCAAAACGCTTCCCTATGAGGATCTCAAGCGCTTTGTTAAGTTGGATACTCGAGCAAGGATTAAGGAAAACAACTCTAGTAAGGCGAAGAATTGAAACATAT
CAGTTAAAAGTCGAGTCAATCTCCATGTGGAAGGAAGAACAAGCAAAAGCTTACACAACAAGGGCAAAGCATTTTAGATCTGTAAGCTATCATCTTATTGTCAAAAAGTA
CTTAACTTCTGATTCACTACTCGTTTTTTAGTTGAATTGTCAAAATTTTGAATATGAATAGAACACACACTCTGCCCACTAGACTCTTTTTATCTTTCACATCTAGTCAA
CTTTCTTGTCCCAAAAGGATGCTTTCGGAATCAACCGATTC
Protein sequenceShow/hide protein sequence
MAMSQIRLVRRSLLNSKEDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRKDAKTLPYE
DLKRFVKLDTRARIKENNSSKAKN