CuGenDBv2

Gene ID	Carg15587
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DUF1713 domain-containing protein
Genome location	Carg_Chr11:10969134..10975040
RNA-Seq Expression	Carg15587
Synteny	Carg15587
Gene Ontology terms	GO:0006397 - mRNA processing (biological process)
InterPro domains	IPR013177 - Mitochondrial mRNA-processing protein COX24, C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7017804.1 hypothetical protein SDJN02_19670, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-49

81.75

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Query:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
        MAS+LQKL+RKSP TR IAAL +QTSQN   PYILHQPLD D+KPD HCDSNLN+VSTSNPS FSLF+PSFPFG CL QISS+G + FEPD+VE DDSRK
Subjt:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRL
        LWADSVKKKRKRKMNKHKYKKLRKRL
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRL

KAG7022690.1 hypothetical protein SDJN02_16424, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.2e-66

100

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Query:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
        MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
Subjt:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLLDPGWS
        LWADSVKKKRKRKMNKHKYKKLRKRLLDPGWS
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLLDPGWS

XP_022928332.1 uncharacterized protein LOC111435191 [Cucurbita moschata]

4.8e-61

99.21

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Query:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
        MASILQKLIRKSP TRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
Subjt:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRL
        LWADSVKKKRKRKMNKHKYKKLRKRL
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRL

XP_022989528.1 uncharacterized protein LOC111486591 [Cucurbita maxima]

5.2e-55

92.06

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Query:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
        MASILQKLIRKSP TRTIAAL SQTSQN SLPYILHQPLDIDRKPDGHCDSNLN+VSTS PSQFS FFPSFPFGL LQQISSTGSI+FEPDYVE++DSRK
Subjt:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRL
        LWADSVKKKRKRKMNKHKYKKLRKRL
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRL

XP_023530210.1 uncharacterized protein LOC111792842 [Cucurbita pepo subsp. pepo]

1.3e-58

95.24

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Query:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
        MASILQKLIRKSP TRTIAAL SQTSQNLSLPYILHQPLDIDRKPDGHCDSNLN+VSTSNPSQFSLFFPSFPFGLCLQQI STGSIRFEPDYVE+DD RK
Subjt:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRL
        LWADSVKKKRKRKMNKHKYKKLRKRL
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDP0 DUF1713 domain-containing protein

1.0e-48

80.95

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Query:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
        MAS+LQ LIRKSP TR IAAL +QTSQNLS P+ILHQPLD D+KPD HC SN+N+ STSNPS FS F+PSFPFGLCL QISSTG + FEPD VE DDSRK
Subjt:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRL
        LWADSVKKKRKRKMNKHKYKKLRKRL
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRL

A0A5A7UNU9 DUF1713 domain-containing protein

1.3e-48

81.75

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Query:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
        MAS+LQKLIRKSP +R IAAL +QTSQNLS P+ILHQPLD D+K D H  SNLN+ STSNPSQFS F+PSFPFGLCL QISSTG + FEPDYVE DDSRK
Subjt:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRL
        LWADSVKKKRKRKMNKHKYKKLRKRL
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRL

A0A6J1EJL0 uncharacterized protein LOC111435191

2.3e-61

99.21

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Query:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
        MASILQKLIRKSP TRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
Subjt:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRL
        LWADSVKKKRKRKMNKHKYKKLRKRL
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRL

A0A6J1F832 uncharacterized protein LOC111441723

2.7e-49

80.95

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Query:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
        MAS+LQKL+RKSP TR IAAL +QTSQN   PYILHQPLD D+KPD HCDSNLN+VSTSNPS FSLF+PSFPFG CL QISS+G + FEP++VE DDSRK
Subjt:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRL
        LWADSVKKKRKRKMNKHKYKKLRKRL
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRL

A0A6J1JQJ4 uncharacterized protein LOC111486591

2.5e-55

92.06

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Query:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK
        MASILQKLIRKSP TRTIAAL SQTSQN SLPYILHQPLDIDRKPDGHCDSNLN+VSTS PSQFS FFPSFPFGL LQQISSTGSI+FEPDYVE++DSRK
Subjt:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRL
        LWADSVKKKRKRKMNKHKYKKLRKRL
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G63150.1 unknown protein

4.6e-09

35.77

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Query:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDID---RKPDGHCDSN-LNAVSTSNPSQFSLFFPSFPFGLCLQ-------QISSTGSIRFE
        MA+++ + +R      +I  L +  S         +   +ID    KPD    +N L  +S +  +Q   F+PSF  GLCL         ++ T S+  E
Subjt:  MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDID---RKPDGHCDSN-LNAVSTSNPSQFSLFFPSFPFGLCLQ-------QISSTGSIRFE

Query:  PDYVEDDDSRKLWADSVKKKRKRKMNKHKYKKLRKRL
            ED     ++ADSVKKKRK+KMNKHKY+KLRK+L
Subjt:  PDYVEDDDSRKLWADSVKKKRKRKMNKHKYKKLRKRL

Sequences

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CDS sequence

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mRNA sequence

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ATGGCGTCGATTCTTCAAAAGCTCATTAGAAAATCGCCATCTACAAGAACAATTGCTGCTCTCGCTAGCCAGACCTCACAAAATCTCTCATTGCCCTATATTCTTCACCA
GCCTCTTGACATTGATAGGAAACCAGACGGCCATTGTGATTCTAATTTAAACGCTGTTTCAACTTCGAATCCGTCTCAATTTTCGCTGTTCTTCCCTAGTTTTCCATTTG
GGCTTTGCTTGCAGCAAATCTCCTCAACTGGCTCGATTCGATTCGAGCCGGATTATGTTGAAGATGACGATTCTCGGAAGCTGTGGGCTGATAGCGTGAAGAAGAAGAGG
AAACGCAAGATGAACAAACACAAGTACAAGAAGCTAAGGAAGAGACTTCTTGATCCAGGTTGGAGCTGATGGGACTTGATCTCCTTGTCTACACGAGCAATTCTCGACTG
TTTGATTTAGTCGAGACAATATATAAGTGAGCAATTCTCGACCGTTTGATTTAGTCGAGACAATATATAAGTGAGCAATTCTCGACCGTTTGATTTAGTCGAGACAATAT
ATAAGTGACTGACTAGAGGCTTGAAATGAAAAGAAATGGTAGGATGTTCTAATGACCTAATAACTCGAACCACCTTGACGAATTAACCCAACCCATAAAAGTTGGGTTGG
GTTGGATTTTTGGAGAACCAAAATTTTGCTTTGGTCAGCGGGTTGAGATTTTTTGGTTGGTTTAACCCAATCTGATATGAACTTAGTTAAATTTACGACCTTTACCTTTG
CCTAAGGGTGTTCAATTGACCCGATAGCTCCAACCATTTAGATTTGTAGATGTTTGATATTTGAGTTTTATGTGATTTTTGTTATGCGGCATATATTATGAATAATTAAT
TGATTTTATGACAATTAAAAATAATAATTAAACAACGGACTATCTAATAGAGAGTTGGGTTGTGAACTCTATTTAGTTCTTCAATTTATAAGAGTTTAAAATTAGAA

Protein sequence

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MASILQKLIRKSPSTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRKLWADSVKKKR
KRKMNKHKYKKLRKRLLDPGWS

Carg15587 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome