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Carg15591 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15591
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationCarg_Chr11:10993936..10995482
RNA-Seq ExpressionCarg15591
SyntenyCarg15591
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581070.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2287.3Show/hide
Query:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM
        + D+GRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN AAKNNA  PEENYQYSPM
Subjt:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM

KAG6588926.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]2.7e-26100Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM

KAG7022694.1 hypothetical protein SDJN02_16428, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-86100Show/hide
Query:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMNFLQILVFWMQKVFSHEKMVLLSLKLIGSDGGGDNRH
        MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMNFLQILVFWMQKVFSHEKMVLLSLKLIGSDGGGDNRH
Subjt:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMNFLQILVFWMQKVFSHEKMVLLSLKLIGSDGGGDNRH

Query:  GERRVKIFLICEGNAESRRDVMVYFLSLCKFRSNRNFSLFISCHGCCWLQLHHSQDF
        GERRVKIFLICEGNAESRRDVMVYFLSLCKFRSNRNFSLFISCHGCCWLQLHHSQDF
Subjt:  GERRVKIFLICEGNAESRRDVMVYFLSLCKFRSNRNFSLFISCHGCCWLQLHHSQDF

XP_038883812.1 protein NOI4-like isoform X1 [Benincasa hispida]1.8e-2287.3Show/hide
Query:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM
        +QDKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN  AKNN   PEENYQYSPM
Subjt:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM

XP_038883820.1 protein NOI4-like isoform X2 [Benincasa hispida]1.8e-2287.3Show/hide
Query:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM
        +QDKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN  AKNN   PEENYQYSPM
Subjt:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM

TrEMBL top hitse value%identityAlignment
A0A0A0LDP9 AvrRpt-cleavage domain-containing protein8.2e-2186.89Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM
        DKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN AAK+N    EENYQYSPM
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM

A0A5D3E371 RPM1-interacting protein 4-like7.4e-2282.09Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMNFLQI
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN AAK+N    EENYQYSPM  L +
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMNFLQI

A0A5J5BYY8 AvrRpt-cleavage domain-containing protein1.5e-1465.22Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEA-------SGNIAAKNNAPEPEENYQYSPM
        QDKGRPLPKFGEWDVNNPASA+GFTVIF+KAR++KK+N A        G    KN+  +  ENYQYSPM
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEA-------SGNIAAKNNAPEPEENYQYSPM

A0A6A6LX06 AvrRpt-cleavage domain-containing protein6.7e-1573.44Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAA---KNNAPEPEENYQYSP
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSN   G  AA    NN  +PEE +Q  P
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAA---KNNAPEPEENYQYSP

B9SLS6 NOI, putative1.8e-1577.05Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAA---KNNAPEPEENYQ
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSN A G  AA    NN  +P++NYQ
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAA---KNNAPEPEENYQ

SwissProt top hitse value%identityAlignment
O22633 Protein NOI41.3e-1277.27Show/hide
Query:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGN
        M DKGRPLPKFGEWDVN+PASAEGFTVIF+KAR+EKK+    G+
Subjt:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGN

Q8GYN5 RPM1-interacting protein 44.6e-0544Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAP
        +K   +PKFG+WD NNP+SA+G+T IF+K R E+ S     N++  +  P
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAP

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein1.3e-1380.95Show/hide
Query:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEAS
        M DKGRPLPKFGEWDVN+P+SAEGFTVIF+KARNEKK    S
Subjt:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEAS

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein9.6e-1477.27Show/hide
Query:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGN
        M DKGRPLPKFGEWDVN+PASAEGFTVIF+KAR+EKK+    G+
Subjt:  MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGN

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein2.8e-1376.74Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGN
        +DKGRPLPKFGEWDVN+PASAEGFTVIF+KAR+EKK+    G+
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGN

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.8e-1376.74Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGN
        +DKGRPLPKFGEWDVN+PASAEGFTVIF+KAR+EKK+    G+
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGN

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein8.7e-1567.86Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEEN
        ++KG+PLPKFGEWDVNNPASAEGFTVIFSKA +EKK+ +ASG  A  N+   P+ N
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGATAAAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAATCCAGCTTCAGCCGAAGGCTTCACAGTAATATTCAGCAAAGCTAGAAATGAG
AAGAAGTCAAATGAGGCTTCTGGGAACATAGCAGCTAAAAACAATGCACCCGAACCGGAAGAGAATTATCAGTATTCTCCCATGAATTTCCTACAAATTCTTGTG
TTTTGGATGCAGAAAGTATTCTCTCATGAAAAAATGGTTTTGCTGTCTCTGAAACTGATAGGGAGCGATGGTGGTGGTGACAACAGACATGGTGAAAGAAGGGTA
AAGATTTTCCTGATTTGTGAGGGAAATGCAGAATCAAGAAGGGATGTGATGGTTTACTTCCTTTCTCTCTGTAAGTTTCGCTCTAATAGAAACTTCAGTTTGTTC
ATCTCATGTCATGGATGTTGTTGGTTGCAACTTCACCATTCACAAGATTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGATAAAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAATCCAGCTTCAGCCGAAGGCTTCACAGTAATATTCAGCAAAGCTAGAAATGAG
AAGAAGTCAAATGAGGCTTCTGGGAACATAGCAGCTAAAAACAATGCACCCGAACCGGAAGAGAATTATCAGTATTCTCCCATGAATTTCCTACAAATTCTTGTG
TTTTGGATGCAGAAAGTATTCTCTCATGAAAAAATGGTTTTGCTGTCTCTGAAACTGATAGGGAGCGATGGTGGTGGTGACAACAGACATGGTGAAAGAAGGGTA
AAGATTTTCCTGATTTGTGAGGGAAATGCAGAATCAAGAAGGGATGTGATGGTTTACTTCCTTTCTCTCTGTAAGTTTCGCTCTAATAGAAACTTCAGTTTGTTC
ATCTCATGTCATGGATGTTGTTGGTTGCAACTTCACCATTCACAAGATTTCTAAACTATTATGTATTTTTCATCTTCTAACTAAAGTAACTGCACATATTGTCTG
TCAAAAACAAACTATACAATCATTATTGTAACGTTTATGACCTTCTTGAGAGCGGAAGTAGAGATATTTTAACTATCGAACCGACCATATCTAAATTTGGTTGAG
TAAGCTTCGTTTCAAAACGAGAGAGAATGGGGAGAGCCATAATGGGGTCGGTATTCTCCGTTCCTGCCCAATATGTTGAACACAACACTCCCTCTTTAGAGCCAT
AATGGGGTTTGTGTTCTCCGTCCTTATCCAATATGTTGAGCACAACTTTTTTTTGTTAGAAACACAACACTCACTCTTTATTAAGACCAATCAAGACTACTGGAC
TCTATTTTGTTTGGAATTTTTAGAATTTATT
Protein sequenceShow/hide protein sequence
MQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMNFLQILVFWMQKVFSHEKMVLLSLKLIGSDGGGDNRHGERRV
KIFLICEGNAESRRDVMVYFLSLCKFRSNRNFSLFISCHGCCWLQLHHSQDF