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Carg15623 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15623
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmyb-related protein 305-like
Genome locationCarg_Chr11:11213031..11215350
RNA-Seq ExpressionCarg15623
SyntenyCarg15623
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044676 - MYB-like transcription factor EOBI/EOBII-like, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588956.1 Myb-related protein 305, partial [Cucurbita argyrosperma subsp. sororia]5.1e-6668.91Show/hide
Query:  MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN----------------
        MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSC+LRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN                
Subjt:  MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN----------------

Query:  -----------------------------------------NSYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE
                                                 +SYTMDPIMETFSPPNYTKNLDAFSLPLLP+DHSNQNYWSMEDLWSMQLLNE
Subjt:  -----------------------------------------NSYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE

KAG7022724.1 Myb-related protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-75100Show/hide
Query:  MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNNSYTMDPIMETFSPPN
        MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNNSYTMDPIMETFSPPN
Subjt:  MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNNSYTMDPIMETFSPPN

Query:  YTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE
        YTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE
Subjt:  YTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE

XP_022928228.1 myb-related protein 305-like [Cucurbita moschata]1.4e-6669.95Show/hide
Query:  MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN----------------
        MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN                
Subjt:  MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN----------------

Query:  -----------------------------------------NSYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE
                                                 +SYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE
Subjt:  -----------------------------------------NSYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE

XP_023531826.1 myb-related protein 305 [Cucurbita pepo subsp. pepo]1.8e-6366.67Show/hide
Query:  AEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN------------------
        AEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLI+ELHAKWGN                  
Subjt:  AEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN------------------

Query:  ----------------------------------------NSYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE
                                                +SYTMDPIMET+SPPNYT+NLDAFSLPLLP+DHSNQNYWSMEDLWSMQLLN+
Subjt:  ----------------------------------------NSYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE

XP_038903806.1 MYB-like transcription factor EOBII [Benincasa hispida]1.0e-5058.12Show/hide
Query:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------------------
        VEVRKGPWTMEEDLILINYIANHGEGVWNSLA SAGLKR GKSCRLRWLNYL P+VRRGNIT +EQLLIMELHAKWGN                      
Subjt:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------------------

Query:  -----------------------------------------SYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLN
                                                 SYTMDP MET+SPP Y++N+DAFS+PL P D+SN NYWSMEDLWSMQLLN
Subjt:  -----------------------------------------SYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLN

TrEMBL top hitse value%identityAlignment
A0A1S3B886 myb-related protein 3056.2e-4955.45Show/hide
Query:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------------------
        VEVRKGPWTMEEDLILINYIANHGEGVWNSLA SAGLKR GKSCRLRWLNYL P+VRRGNIT DEQLLIMELHAKWGN                      
Subjt:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------------------

Query:  ---------------------------------------------------SYTMDPIMETFSPPNYTKNLDAFSLPLLPVD-HSNQNYWSMEDLWSMQL
                                                           SYTMDP MET+SPP Y++N+DAFS+PL P D +SN NYWSMEDLWSMQL
Subjt:  ---------------------------------------------------SYTMDPIMETFSPPNYTKNLDAFSLPLLPVD-HSNQNYWSMEDLWSMQL

Query:  LN
        LN
Subjt:  LN

A0A6J1DFI0 myb-related protein 305-like1.2e-4756.32Show/hide
Query:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------------------
        VEVRKGPWTMEEDLILINYIANHGEGVWNSLA +AGLKR GKSCRLRWLNYL P+VRRGNIT +EQLLIMELHAKWGN                      
Subjt:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------------------

Query:  ----------------------------------------SYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLN
                                                SYTMDP+    SPPN   NLDAF++PL P D+SN+NYWSMEDLWSMQLLN
Subjt:  ----------------------------------------SYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLN

A0A6J1ENE2 myb-related protein 305-like6.5e-6769.95Show/hide
Query:  MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN----------------
        MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN                
Subjt:  MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN----------------

Query:  -----------------------------------------NSYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE
                                                 +SYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE
Subjt:  -----------------------------------------NSYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE

A0A6J1F320 myb-related protein 305-like7.3e-5057.07Show/hide
Query:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------------------
        VEVRKGPWTMEEDL LINYIANHGEGVWNSLA SAGLKR GKSCRLRWLNYL P+VRRGNIT +EQLLIMELHAKWGN                      
Subjt:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------------------

Query:  -----------------------------------------SYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLN
                                                 SYTMDP MET+SPP Y++N+DAFS+PL P D+ N NYWSMEDLWSMQLLN
Subjt:  -----------------------------------------SYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLN

A0A6J1J524 myb-related protein 305-like7.3e-5057.07Show/hide
Query:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------------------
        VEVRKGPWTMEEDL LINYIANHGEGVWNSLA SAGLKR GKSCRLRWLNYL P+VRRGNIT +EQLLIMELHAKWGN                      
Subjt:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------------------

Query:  -----------------------------------------SYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLN
                                                 SYTMDP MET+SPP Y++N+DAFS+PL P D+ N NYWSMEDLWSMQLLN
Subjt:  -----------------------------------------SYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLN

SwissProt top hitse value%identityAlignment
E0CJS3 MYB-like transcription factor EOBII1.1e-4251.09Show/hide
Query:  EVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN-----------------------
        EVRKGPWTMEEDLILINYIANHGEGVWNSLA SAGLKR GKSCRLRWLNYL P+VRRGNIT +EQLLIMELHAKWGN                       
Subjt:  EVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN-----------------------

Query:  ---------------------------------NSYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLN
                                         N    + I +T+SP +Y+ N+D F      +  +N N WSMED+WSMQLLN
Subjt:  ---------------------------------NSYTMDPIMETFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLN

L7R9Z0 MYB-like transcription factor EOBI2.9e-4048.94Show/hide
Query:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------------------
        VEVRKGPWTMEEDLILINYIANHGEGVWNSLA SAGLKR GKSCRLRWLNYL P+VRRGNIT +EQLLIMELHAKWGN                      
Subjt:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------------------

Query:  ---------------------------------SYTMDPIMETFSPPNYTK----NLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE
                                         S      ++++SP +YT+    N++  +        +N+N WSMEDLWS+QLLN+
Subjt:  ---------------------------------SYTMDPIMETFSPPNYTK----NLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLNE

P81391 Myb-related protein 3051.6e-4150Show/hide
Query:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN----------------------
        VEVRKGPWTMEEDLILINYIANHGEGVWNSLA SAGLKR GKSCRLRWLNYL P+VRRGNIT +EQLLIMELHAKWGN                      
Subjt:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN----------------------

Query:  ------------------NSYTMD------------------PIME-------TFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLN
                          N+  M+                  P+++       ++SP ++  N   F  P  P D SN N WSMED WSMQLLN
Subjt:  ------------------NSYTMD------------------PIME-------TFSPPNYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLLN

P81396 Myb-related protein 3402.0e-3648.65Show/hide
Query:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------SYTMDPIMETFS
        VEVRKGPWTMEEDLILIN+I+NHGEGVWN++A SAGLKR GKSCRLRWLNYL P+VRRGNIT +EQLLIMELHAKWGN            T + I   ++
Subjt:  VEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN---------SYTMDPIMETFS

Query:  PPNYTKNL-----------------DAFSLPLLP----VDH--------------------------SNQNYWSMEDLWSMQLLN
             K++                 +  S  LL      DH                          SN  +WSMEDLWSMQL N
Subjt:  PPNYTKNL-----------------DAFSLPLLP----VDH--------------------------SNQNYWSMEDLWSMQLLN

Q9SPG9 Transcription factor MYB247.3e-3946.77Show/hide
Query:  GVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN--------------------
        G  EVRKGPWTMEEDLILINYIANHGEGVWNSLA SAGLKR GKSCRLRWLNYL P+VRRGNIT +EQL IMELHAKWGN                    
Subjt:  GVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN--------------------

Query:  -------------------------------NSYTMDPIMET---FSPP----------------NYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLL
                                        S+ M+   ET   +SP                 NY     +  +P L VD S QNYWS++DLW M + 
Subjt:  -------------------------------NSYTMDPIMET---FSPP----------------NYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLL

Query:  N
        N
Subjt:  N

Arabidopsis top hitse value%identityAlignment
AT3G01530.1 myb domain protein 572.3e-3278.95Show/hide
Query:  VRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN
        VRKGPWTMEED IL NYI NHGEG+WNS+A ++GLKR GKSCRLRWLNYL P+VRRGNIT +EQLLI++LHAK GN
Subjt:  VRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN

AT3G27810.1 myb domain protein 212.2e-3844.93Show/hide
Query:  EVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN----------------------
        EVRKGPWTMEEDLILINYIANHG+GVWNSLA SAGLKR GKSCRLRWLNYL P+VRRGNIT +EQL+IMELHAKWGN                       
Subjt:  EVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNN----------------------

Query:  -------------------------------------SYTMDPIMETFSPP--------------NY-----TKNLDAFSLPLLPVDHSNQNYWSMEDLW
                                               T D  MET+SP               NY     T  +D + +P+   D + +NYW M+D+W
Subjt:  -------------------------------------SYTMDPIMETFSPP--------------NY-----TKNLDAFSLPLLPVDHSNQNYWSMEDLW

Query:  -SMQLLN
         SM LLN
Subjt:  -SMQLLN

AT5G40350.1 myb domain protein 245.2e-4046.77Show/hide
Query:  GVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN--------------------
        G  EVRKGPWTMEEDLILINYIANHGEGVWNSLA SAGLKR GKSCRLRWLNYL P+VRRGNIT +EQL IMELHAKWGN                    
Subjt:  GVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN--------------------

Query:  -------------------------------NSYTMDPIMET---FSPP----------------NYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLL
                                        S+ M+   ET   +SP                 NY     +  +P L VD S QNYWS++DLW M + 
Subjt:  -------------------------------NSYTMDPIMET---FSPP----------------NYTKNLDAFSLPLLPVDHSNQNYWSMEDLWSMQLL

Query:  N
        N
Subjt:  N

AT5G49620.1 myb domain protein 784.0e-3275.31Show/hide
Query:  EGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN
        E  ++VR+GPWT+EEDL LINYIA+HGEG WNSLA  A LKR GKSCRLRWLNYL P+VRRGNIT +EQLLI+ELH +WGN
Subjt:  EGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGN

AT5G49620.2 myb domain protein 783.0e-3273.49Show/hide
Query:  EGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNNS
        E  ++VR+GPWT+EEDL LINYIA+HGEG WNSLA  A LKR GKSCRLRWLNYL P+VRRGNIT +EQLLI+ELH +WGN++
Subjt:  EGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCAGAAGGTGTGGTGGAGGTTAGAAAAGGGCCATGGACTATGGAAGAAGACTTGATTCTCATCAACTACATAGCCAATCATGGTGAAGGTGTTTGGAACTCTCT
TGCTCTCTCCGCTGGTCTAAAACGTAACGGGAAGAGCTGTCGACTCCGGTGGCTGAACTACCTCCATCCCAACGTTCGACGAGGCAACATCACTTCAGATGAACAACTAC
TGATCATGGAACTACACGCCAAATGGGGAAATAATTCTTACACAATGGATCCAATAATGGAAACCTTTTCTCCTCCAAATTACACTAAAAATCTTGATGCCTTCTCATTG
CCTTTGCTCCCAGTTGACCATTCCAATCAAAATTATTGGAGCATGGAGGATCTATGGTCTATGCAACTTCTCAACGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCAGAAGGTGTGGTGGAGGTTAGAAAAGGGCCATGGACTATGGAAGAAGACTTGATTCTCATCAACTACATAGCCAATCATGGTGAAGGTGTTTGGAACTCTCT
TGCTCTCTCCGCTGGTCTAAAACGTAACGGGAAGAGCTGTCGACTCCGGTGGCTGAACTACCTCCATCCCAACGTTCGACGAGGCAACATCACTTCAGATGAACAACTAC
TGATCATGGAACTACACGCCAAATGGGGAAATAATTCTTACACAATGGATCCAATAATGGAAACCTTTTCTCCTCCAAATTACACTAAAAATCTTGATGCCTTCTCATTG
CCTTTGCTCCCAGTTGACCATTCCAATCAAAATTATTGGAGCATGGAGGATCTATGGTCTATGCAACTTCTCAACGAATAA
Protein sequenceShow/hide protein sequence
MDAEGVVEVRKGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYLHPNVRRGNITSDEQLLIMELHAKWGNNSYTMDPIMETFSPPNYTKNLDAFSL
PLLPVDHSNQNYWSMEDLWSMQLLNE