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Carg15667 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15667
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLOB domain-containing protein
Genome locationCarg_Chr19:8993376..8993812
RNA-Seq ExpressionCarg15667
SyntenyCarg15667
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572459.1 LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. sororia]2.0e-61100Show/hide
Query:  GGAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLA
        GGAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLA
Subjt:  GGAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLA

Query:  ITRAQLLQLKIAQFSSPKSSS
        ITRAQLLQLKIAQFSSPKSSS
Subjt:  ITRAQLLQLKIAQFSSPKSSS

KAG7012059.1 LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-61100Show/hide
Query:  GGAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLA
        GGAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLA
Subjt:  GGAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLA

Query:  ITRAQLLQLKIAQFSSPKSSS
        ITRAQLLQLKIAQFSSPKSSS
Subjt:  ITRAQLLQLKIAQFSSPKSSS

XP_004139827.1 LOB domain-containing protein 4 [Cucumis sativus]9.6e-4882.5Show/hide
Query:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI
        GA  PCAACKLLRRRC  DCVFAPYFPA HPHKF SVHKVFGASNVSKLLQEL EQQ SDAVSSMVYEANARIRDPVYGCVG I+CLQ+QVDALQQQLAI
Subjt:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI

Query:  TRAQLLQLKIAQFSSPKSSS
        T+AQL+Q+K+ QF++   SS
Subjt:  TRAQLLQLKIAQFSSPKSSS

XP_008447124.1 PREDICTED: LOB domain-containing protein 4-like [Cucumis melo]1.5e-4884.17Show/hide
Query:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI
        GA  PCAACKLLRRRC  DCVFAPYFPA HPHKF SVHKVFGASNVSKLLQEL EQQ SDAVSSMVYEANARIRDPVYGCVGTI+CLQ+QVDALQQQLAI
Subjt:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI

Query:  TRAQLLQLKIAQFSSPKSSS
        T+AQL+QLK+ QF++   SS
Subjt:  TRAQLLQLKIAQFSSPKSSS

XP_022969400.1 LOB domain-containing protein 4-like [Cucurbita maxima]1.9e-4886.67Show/hide
Query:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI
        GA  PCAACKLLRRRC Q CVFAPYFPAHHPHK  SVH+VFGASNVSKLLQELGE Q SDAVS MVYEANARIRD V GCVGTIACLQRQVDALQQ+LAI
Subjt:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI

Query:  TRAQLLQLKIAQFSSPKSSS
        T+AQLLQLK+AQFSS KSSS
Subjt:  TRAQLLQLKIAQFSSPKSSS

TrEMBL top hitse value%identityAlignment
A0A0A0K5P4 LOB domain-containing protein4.6e-4882.5Show/hide
Query:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI
        GA  PCAACKLLRRRC  DCVFAPYFPA HPHKF SVHKVFGASNVSKLLQEL EQQ SDAVSSMVYEANARIRDPVYGCVG I+CLQ+QVDALQQQLAI
Subjt:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI

Query:  TRAQLLQLKIAQFSSPKSSS
        T+AQL+Q+K+ QF++   SS
Subjt:  TRAQLLQLKIAQFSSPKSSS

A0A1S3BGP4 LOB domain-containing protein 4-like7.2e-4984.17Show/hide
Query:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI
        GA  PCAACKLLRRRC  DCVFAPYFPA HPHKF SVHKVFGASNVSKLLQEL EQQ SDAVSSMVYEANARIRDPVYGCVGTI+CLQ+QVDALQQQLAI
Subjt:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI

Query:  TRAQLLQLKIAQFSSPKSSS
        T+AQL+QLK+ QF++   SS
Subjt:  TRAQLLQLKIAQFSSPKSSS

A0A5A7U720 LOB domain-containing protein 4-like7.2e-4984.17Show/hide
Query:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI
        GA  PCAACKLLRRRC  DCVFAPYFPA HPHKF SVHKVFGASNVSKLLQEL EQQ SDAVSSMVYEANARIRDPVYGCVGTI+CLQ+QVDALQQQLAI
Subjt:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI

Query:  TRAQLLQLKIAQFSSPKSSS
        T+AQL+QLK+ QF++   SS
Subjt:  TRAQLLQLKIAQFSSPKSSS

A0A6J1EVU9 LOB domain-containing protein 4-like1.3e-4785.96Show/hide
Query:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI
        GAP PCAACKLLRRRC QDCVFAPYFPA  PHKF SVHKVFGASNV+KLLQEL EQ  SDAVSSMVYEANARIRDP+YGCVGTI+CLQRQVDALQQQLA+
Subjt:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI

Query:  TRAQLLQLKIAQFS
        T+AQLL  K+AQFS
Subjt:  TRAQLLQLKIAQFS

A0A6J1HZU0 LOB domain-containing protein 4-like9.3e-4986.67Show/hide
Query:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI
        GA  PCAACKLLRRRC Q CVFAPYFPAHHPHK  SVH+VFGASNVSKLLQELGE Q SDAVS MVYEANARIRD V GCVGTIACLQRQVDALQQ+LAI
Subjt:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI

Query:  TRAQLLQLKIAQFSSPKSSS
        T+AQLLQLK+AQFSS KSSS
Subjt:  TRAQLLQLKIAQFSSPKSSS

SwissProt top hitse value%identityAlignment
Q8L5T5 LOB domain-containing protein 158.7e-3665.71Show/hide
Query:  PCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAITRAQ
        PCAACKLLRRRC Q+C F+PYF  H PHKF SVHKVFGASNVSK+L E+ E Q +DA +S+VYEAN R+RDPVYGC+G I+ LQ+QV ALQ +L   R++
Subjt:  PCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAITRAQ

Query:  LLQLK
        +L+ K
Subjt:  LLQLK

Q8LBW3 LOB domain-containing protein 121.8e-3664.86Show/hide
Query:  GGAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLA
        G    PCA+CKLLRRRC +DC+FAPYFP   PHKF  VHKVFGASNVSK+LQEL   Q +DAV+S+V+EANAR+RDPVYGCVG I+ LQ QV  LQ QLA
Subjt:  GGAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLA

Query:  ITRAQLLQLKI
        + +A++L +++
Subjt:  ITRAQLLQLKI

Q9AT61 LOB domain-containing protein 134.8e-3460.95Show/hide
Query:  PCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAITRAQ
        PCAACKLLRRRC ++C F+PYF  H PHKF +VHKVFGASNVSK+L E+GE Q  DA +S+VYEAN R+RDP+YGC+G I+ LQ  + +LQ +L   R +
Subjt:  PCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAITRAQ

Query:  LLQLK
        +L+ K
Subjt:  LLQLK

Q9SA51 LOB domain-containing protein 31.5e-3565.77Show/hide
Query:  GGAPPPCAACKLLRRRCGQD-CVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQL
        G    PCA CKLLRR+C +D CVFAPYFPA  P+KF  VHK+FGASNV+K+LQEL E   SDAV SMVYEANARI+DPVYGCVGTI+ L RQ++ LQ QL
Subjt:  GGAPPPCAACKLLRRRCGQD-CVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQL

Query:  AITRAQLLQLK
        A  +A+L+ ++
Subjt:  AITRAQLLQLK

Q9SHE9 LOB domain-containing protein 41.0e-3968.75Show/hide
Query:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI
        GA  PCAACKLLRRRC QDCVF+PYFPA  P KF +VH+VFGASNV+K+LQEL   Q  DAVSSMVYEANAR+RDPVYGCVG I+ LQ+Q+D LQ QLA+
Subjt:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI

Query:  TRAQLLQLKIAQ
         +A+++ L++ Q
Subjt:  TRAQLLQLKIAQ

Arabidopsis top hitse value%identityAlignment
AT1G16530.1 ASYMMETRIC LEAVES 2-like 91.1e-3665.77Show/hide
Query:  GGAPPPCAACKLLRRRCGQD-CVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQL
        G    PCA CKLLRR+C +D CVFAPYFPA  P+KF  VHK+FGASNV+K+LQEL E   SDAV SMVYEANARI+DPVYGCVGTI+ L RQ++ LQ QL
Subjt:  GGAPPPCAACKLLRRRCGQD-CVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQL

Query:  AITRAQLLQLK
        A  +A+L+ ++
Subjt:  AITRAQLLQLK

AT1G31320.1 LOB domain-containing protein 47.1e-4168.75Show/hide
Query:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI
        GA  PCAACKLLRRRC QDCVF+PYFPA  P KF +VH+VFGASNV+K+LQEL   Q  DAVSSMVYEANAR+RDPVYGCVG I+ LQ+Q+D LQ QLA+
Subjt:  GAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAI

Query:  TRAQLLQLKIAQ
         +A+++ L++ Q
Subjt:  TRAQLLQLKIAQ

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein1.3e-3764.86Show/hide
Query:  GGAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLA
        G    PCA+CKLLRRRC +DC+FAPYFP   PHKF  VHKVFGASNVSK+LQEL   Q +DAV+S+V+EANAR+RDPVYGCVG I+ LQ QV  LQ QLA
Subjt:  GGAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLA

Query:  ITRAQLLQLKI
        + +A++L +++
Subjt:  ITRAQLLQLKI

AT2G30340.1 LOB domain-containing protein 133.4e-3560.95Show/hide
Query:  PCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAITRAQ
        PCAACKLLRRRC ++C F+PYF  H PHKF +VHKVFGASNVSK+L E+GE Q  DA +S+VYEAN R+RDP+YGC+G I+ LQ  + +LQ +L   R +
Subjt:  PCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAITRAQ

Query:  LLQLK
        +L+ K
Subjt:  LLQLK

AT2G40470.1 LOB domain-containing protein 156.2e-3765.71Show/hide
Query:  PCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAITRAQ
        PCAACKLLRRRC Q+C F+PYF  H PHKF SVHKVFGASNVSK+L E+ E Q +DA +S+VYEAN R+RDPVYGC+G I+ LQ+QV ALQ +L   R++
Subjt:  PCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAITRAQ

Query:  LLQLK
        +L+ K
Subjt:  LLQLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCGGCGCCCCACCGCCTTGCGCTGCGTGCAAGCTTCTGCGGCGGCGGTGTGGTCAAGACTGCGTTTTTGCTCCTTATTTCCCTGCCCATCACCCCCATAAATTCTGCAG
TGTTCACAAGGTGTTTGGAGCGAGTAATGTCAGCAAATTGTTGCAGGAGTTGGGAGAGCAGCAAGGGAGCGATGCTGTGAGTTCGATGGTGTACGAGGCAAATGCAAGGA
TTCGAGATCCAGTTTACGGGTGCGTGGGAACGATAGCGTGTCTGCAGCGCCAAGTGGATGCGTTGCAACAGCAATTGGCCATCACACGAGCCCAGCTACTTCAATTGAAA
ATCGCCCAATTTTCTTCACCAAAATCATCATCC
mRNA sequenceShow/hide mRNA sequence
GGCGGCGCCCCACCGCCTTGCGCTGCGTGCAAGCTTCTGCGGCGGCGGTGTGGTCAAGACTGCGTTTTTGCTCCTTATTTCCCTGCCCATCACCCCCATAAATTCTGCAG
TGTTCACAAGGTGTTTGGAGCGAGTAATGTCAGCAAATTGTTGCAGGAGTTGGGAGAGCAGCAAGGGAGCGATGCTGTGAGTTCGATGGTGTACGAGGCAAATGCAAGGA
TTCGAGATCCAGTTTACGGGTGCGTGGGAACGATAGCGTGTCTGCAGCGCCAAGTGGATGCGTTGCAACAGCAATTGGCCATCACACGAGCCCAGCTACTTCAATTGAAA
ATCGCCCAATTTTCTTCACCAAAATCATCATCC
Protein sequenceShow/hide protein sequence
GGAPPPCAACKLLRRRCGQDCVFAPYFPAHHPHKFCSVHKVFGASNVSKLLQELGEQQGSDAVSSMVYEANARIRDPVYGCVGTIACLQRQVDALQQQLAITRAQLLQLK
IAQFSSPKSSS