; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15671 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15671
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCYSTM domain-containing protein
Genome locationCarg_Chr19:8973090..8973700
RNA-Seq ExpressionCarg15671
SyntenyCarg15671
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012055.1 hypothetical protein SDJN02_26963 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-31100Show/hide
Query:  MSQEMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
        MSQEMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
Subjt:  MSQEMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF

XP_022969369.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucurbita maxima]5.3e-2995.38Show/hide
Query:  MSQEMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
        MSQEMGSKLEAG YVAAPPPVGYPVRDGPE P QTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
Subjt:  MSQEMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF

XP_022989102.1 cysteine-rich and transmembrane domain-containing protein B-like isoform X2 [Cucurbita maxima]2.7e-2085.45Show/hide
Query:  AGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
        +G YVAAPPPVGYPVRDGP+ P QT TPQTQS+GDGFWKGC AALCCCWVLDCVF
Subjt:  AGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF

XP_023511660.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucurbita pepo subsp. pepo]4.8e-3096.92Show/hide
Query:  MSQEMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
        MSQEMGSKLEAG YVAAPPPVGYPVRDGPEDP QTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
Subjt:  MSQEMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF

XP_038888289.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]4.1e-2189.29Show/hide
Query:  AGAYVAAPPPVGYPVRDGPEDPRQTS-TPQTQSRGDGFWKGCCAALCCCWVLDCVF
        AG YVAAPPPVGYPVRDGP+ P QT+ TPQTQSRGDGFWKGCCAALCCCWVLDCVF
Subjt:  AGAYVAAPPPVGYPVRDGPEDPRQTS-TPQTQSRGDGFWKGCCAALCCCWVLDCVF

TrEMBL top hitse value%identityAlignment
A0A0A0K5N8 CYSTM domain-containing protein6.4e-2074.6Show/hide
Query:  EMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTS-TPQTQSRGDGFWKGCCAALCCCWVLDCVF
        E   + ++G YVAAPPPVGYPVRDGP+ P QT+   QTQSRGDGFWKGCCAALCCCWVLDC+F
Subjt:  EMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTS-TPQTQSRGDGFWKGCCAALCCCWVLDCVF

A0A5A7USJ3 Cysteine-rich and transmembrane domain-containing protein A-like6.4e-2074.6Show/hide
Query:  EMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTS-TPQTQSRGDGFWKGCCAALCCCWVLDCVF
        E   + ++G YVAAPPPVGYPVRDGP+ P QT+   QTQSRGDGFWKGCCAALCCCWVLDC+F
Subjt:  EMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTS-TPQTQSRGDGFWKGCCAALCCCWVLDCVF

A0A6J1I2D9 cysteine-rich and transmembrane domain-containing protein WIH1-like2.6e-2995.38Show/hide
Query:  MSQEMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
        MSQEMGSKLEAG YVAAPPPVGYPVRDGPE P QTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
Subjt:  MSQEMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF

A0A6J1JEV3 cysteine-rich and transmembrane domain-containing protein B-like isoform X21.3e-2085.45Show/hide
Query:  AGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
        +G YVAAPPPVGYPVRDGP+ P QT TPQTQS+GDGFWKGC AALCCCWVLDCVF
Subjt:  AGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF

A0A6J1JJ37 cysteine-rich and transmembrane domain-containing protein B-like isoform X11.3e-2085.45Show/hide
Query:  AGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
        +G YVAAPPPVGYPVRDGP+ P QT TPQTQS+GDGFWKGC AALCCCWVLDCVF
Subjt:  AGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05340.1 unknown protein9.5e-0847.92Show/hide
Query:  PPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
        PPP+GYP              +T+S+GDGF+KGC AA+CCC  LD  F
Subjt:  PPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF

AT1G56060.1 unknown protein7.7e-1048.44Show/hide
Query:  EMGSKLEAGAYVAAPPPVGYPV--RDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
        EM   +    YV APPP+GYPV  +D P+  +     Q++  G GF +GC AA+CCC VLDCVF
Subjt:  EMGSKLEAGAYVAAPPPVGYPV--RDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF

AT2G32190.1 unknown protein7.2e-0850Show/hide
Query:  LEAGAYVAAPPPVGYPVRDGPEDPRQTSTP-QTQSRGDGFWKGCCAALCCCWVLDCVF
        +  G Y+  PPP+GYP  D       T  P +T+S+GDGF KGC AA+CCC VLD  F
Subjt:  LEAGAYVAAPPPVGYPVRDGPEDPRQTSTP-QTQSRGDGFWKGCCAALCCCWVLDCVF

AT2G32210.1 unknown protein1.3e-0952.63Show/hide
Query:  LEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
        +  G YV APPP+GYP  D        +T +T+S+GDGF KGC AA+CCC VLD  F
Subjt:  LEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF

AT3G22240.1 unknown protein1.2e-1350.77Show/hide
Query:  MSQEMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF
        +S E  S+  +G Y  +PPP+GYP RD        +  +T+S+GDGFWKGCCAA+CCC VLD  F
Subjt:  MSQEMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCAAGAAATGGGCAGTAAGTTAGAGGCGGGGGCTTATGTTGCAGCTCCACCCCCGGTTGGGTATCCGGTGAGAGACGGCCCAGAGGACCCTCGCCAAACTTCTAC
GCCACAAACGCAGTCTAGGGGAGATGGGTTCTGGAAAGGATGCTGTGCTGCGTTGTGTTGCTGCTGGGTGTTGGACTGTGTGTTCTGA
mRNA sequenceShow/hide mRNA sequence
AGAAACGCGTTTGATGAAATTTGTTCAGCTCTGTATGAATGATTCCACCGCCCTTTGGCGTTGCTTCCATTTCCATGAATCTTCTGTTTTCACACACAATTTATTCGTAT
ATATATATATATACAAACGCCATGGCTTCTCCTAACTTGCATTCGTAAACTCCATCGTTTCTCTGCAATTCTGAGCTTGGTTACCGGGTGATGAGTCAAGAAATGGGCAG
TAAGTTAGAGGCGGGGGCTTATGTTGCAGCTCCACCCCCGGTTGGGTATCCGGTGAGAGACGGCCCAGAGGACCCTCGCCAAACTTCTACGCCACAAACGCAGTCTAGGG
GAGATGGGTTCTGGAAAGGATGCTGTGCTGCGTTGTGTTGCTGCTGGGTGTTGGACTGTGTGTTCTGAGAGTGATGGGGTCTGCTATTGATTTATTTATTTTTTGTTATT
CTTTTATTACATACGCCTTCTTATTATTGTGTATTATTCTATTTTCTTTGTATTAATAAATAAATTTTGTTATCTAA
Protein sequenceShow/hide protein sequence
MSQEMGSKLEAGAYVAAPPPVGYPVRDGPEDPRQTSTPQTQSRGDGFWKGCCAALCCCWVLDCVF