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Carg15685 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15685
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor PAR2-like
Genome locationCarg_Chr19:8898478..8898819
RNA-Seq ExpressionCarg15685
SyntenyCarg15685
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572440.1 Transcription factor PAR2, partial [Cucurbita argyrosperma subsp. sororia]7.1e-5398.23Show/hide
Query:  MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF
        MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVD+LFEQTAEYIMNLQHQVKAMRALSSF
Subjt:  MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF

Query:  FESLEKEKSECGG
        FESL+KEKSECGG
Subjt:  FESLEKEKSECGG

XP_004140253.1 transcription factor PAR2 [Cucumis sativus]7.3e-4279.2Show/hide
Query:  MDKPQFQTLNLTTASRQK------------HRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQFQTL  TT SRQK            HRRRSRR+VP +    KIHRN  VF SEEPDEKE VERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQFQTLNLTTASRQK------------HRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSECGG
        HQVKAMRALSSFFESLEKEKSECGG
Subjt:  HQVKAMRALSSFFESLEKEKSECGG

XP_022952623.1 transcription factor PAR2-like [Cucurbita moschata]5.4e-5399.12Show/hide
Query:  MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF
        MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFA EEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF
Subjt:  MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF

Query:  FESLEKEKSECGG
        FESLEKEKSECGG
Subjt:  FESLEKEKSECGG

XP_022968919.1 transcription factor PAR2-like [Cucurbita maxima]4.6e-5297.35Show/hide
Query:  MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF
        MDKPQFQTLNLTTASRQKHRRRSRRKVPATCN KKIHRNGAVFAS EPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALS+F
Subjt:  MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF

Query:  FESLEKEKSECGG
        FESLEKEKSECGG
Subjt:  FESLEKEKSECGG

XP_023554716.1 transcription factor PAR2-like [Cucurbita pepo subsp. pepo]1.1e-53100Show/hide
Query:  MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF
        MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF
Subjt:  MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF

Query:  FESLEKEKSECGG
        FESLEKEKSECGG
Subjt:  FESLEKEKSECGG

TrEMBL top hitse value%identityAlignment
A0A0A0KGU6 Uncharacterized protein3.6e-4279.2Show/hide
Query:  MDKPQFQTLNLTTASRQK------------HRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQFQTL  TT SRQK            HRRRSRR+VP +    KIHRN  VF SEEPDEKE VERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQFQTLNLTTASRQK------------HRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSECGG
        HQVKAMRALSSFFESLEKEKSECGG
Subjt:  HQVKAMRALSSFFESLEKEKSECGG

A0A1S3BM86 transcription factor PAR2-like1.6e-3976.98Show/hide
Query:  MDKPQFQTLNLTTASRQK------------HRRRSRRKVPATCNV-KKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MDKPQFQTL  TT SRQK            HRRRSRR+VP +  +  KIHRN  VF  EE DEKE VERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDKPQFQTLNLTTASRQK------------HRRRSRRKVPATCNV-KKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSSFFESLEKEKSECGG
        QHQVKAMRALSSFFESLEKEKSECGG
Subjt:  QHQVKAMRALSSFFESLEKEKSECGG

A0A5A7V5C4 Transcription factor PAR2-like1.6e-3976.98Show/hide
Query:  MDKPQFQTLNLTTASRQK------------HRRRSRRKVPATCNV-KKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MDKPQFQTL  TT SRQK            HRRRSRR+VP +  +  KIHRN  VF  EE DEKE VERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDKPQFQTLNLTTASRQK------------HRRRSRRKVPATCNV-KKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSSFFESLEKEKSECGG
        QHQVKAMRALSSFFESLEKEKSECGG
Subjt:  QHQVKAMRALSSFFESLEKEKSECGG

A0A6J1GL48 transcription factor PAR2-like2.6e-5399.12Show/hide
Query:  MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF
        MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFA EEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF
Subjt:  MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF

Query:  FESLEKEKSECGG
        FESLEKEKSECGG
Subjt:  FESLEKEKSECGG

A0A6J1I119 transcription factor PAR2-like2.2e-5297.35Show/hide
Query:  MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF
        MDKPQFQTLNLTTASRQKHRRRSRRKVPATCN KKIHRNGAVFAS EPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALS+F
Subjt:  MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF

Query:  FESLEKEKSECGG
        FESLEKEKSECGG
Subjt:  FESLEKEKSECGG

SwissProt top hitse value%identityAlignment
Q9LXR7 Transcription factor PAR29.7e-1342.72Show/hide
Query:  LTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSE
        + T+S   +RR  +R   AT +V +          +E +++E VE KI ALQ+IVPGG  LGVD LFE+TA YI+ LQ Q+ A++ L++F E  EK+  +
Subjt:  LTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSE

Query:  CGG
         GG
Subjt:  CGG

Q9M0B9 Transcription factor IBH1-like 14.8e-0439.02Show/hide
Query:  HRRRSRRKVPATCNVKKIHRNGAVFASEE--PDEKEVVERKIRALQSIVPGGESLGVD-KLFEQTAEYIMNLQHQVKAMRAL
        HR+  RR        KKI R  +  ASEE     K +V+R+ + L+++VPGGE +  D  L ++T +YI++LQ QV  MR++
Subjt:  HRRRSRRKVPATCNVKKIHRNGAVFASEE--PDEKEVVERKIRALQSIVPGGESLGVD-KLFEQTAEYIMNLQHQVKAMRAL

Q9SJH0 Transcription factor PAR12.4e-1143.62Show/hide
Query:  RRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSECGG
        RR  RR      +V++        A EE DE   V+ KI ALQ I+PGG +LGVD LFE+TA YI++LQ Q+K ++ L+SF + +++E  + GG
Subjt:  RRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSECGG

Arabidopsis top hitse value%identityAlignment
AT2G42870.1 phy rapidly regulated 11.7e-1243.62Show/hide
Query:  RRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSECGG
        RR  RR      +V++        A EE DE   V+ KI ALQ I+PGG +LGVD LFE+TA YI++LQ Q+K ++ L+SF + +++E  + GG
Subjt:  RRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSECGG

AT3G05800.1 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 12.2e-0432.94Show/hide
Query:  RRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLE
        RR R   PA+     I  +G    S    +   V  ++R L  +VPG     + +L ++TA+YI  L+ QV+AM ALS     L+
Subjt:  RRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLE

AT3G58850.1 phy rapidly regulated 26.9e-1442.72Show/hide
Query:  LTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSE
        + T+S   +RR  +R   AT +V +          +E +++E VE KI ALQ+IVPGG  LGVD LFE+TA YI+ LQ Q+ A++ L++F E  EK+  +
Subjt:  LTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSE

Query:  CGG
         GG
Subjt:  CGG

AT4G30410.1 sequence-specific DNA binding transcription factors3.4e-0539.02Show/hide
Query:  HRRRSRRKVPATCNVKKIHRNGAVFASEE--PDEKEVVERKIRALQSIVPGGESLGVD-KLFEQTAEYIMNLQHQVKAMRAL
        HR+  RR        KKI R  +  ASEE     K +V+R+ + L+++VPGGE +  D  L ++T +YI++LQ QV  MR++
Subjt:  HRRRSRRKVPATCNVKKIHRNGAVFASEE--PDEKEVVERKIRALQSIVPGGESLGVD-KLFEQTAEYIMNLQHQVKAMRAL

AT4G30410.2 sequence-specific DNA binding transcription factors3.4e-0539.02Show/hide
Query:  HRRRSRRKVPATCNVKKIHRNGAVFASEE--PDEKEVVERKIRALQSIVPGGESLGVD-KLFEQTAEYIMNLQHQVKAMRAL
        HR+  RR        KKI R  +  ASEE     K +V+R+ + L+++VPGGE +  D  L ++T +YI++LQ QV  MR++
Subjt:  HRRRSRRKVPATCNVKKIHRNGAVFASEE--PDEKEVVERKIRALQSIVPGGESLGVD-KLFEQTAEYIMNLQHQVKAMRAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAACCTCAATTTCAAACTCTTAACCTAACCACTGCTTCTCGTCAGAAACACCGTCGCCGGAGCCGGAGGAAAGTACCGGCTACCTGCAATGTTAAGAAGATTCA
CCGAAACGGCGCTGTTTTTGCCTCGGAAGAACCGGATGAGAAGGAGGTCGTGGAACGGAAGATTCGCGCATTGCAGAGTATTGTACCGGGAGGTGAATCGCTTGGAGTCG
ACAAGTTGTTTGAACAGACGGCGGAGTATATAATGAACTTGCAGCATCAAGTGAAGGCCATGAGAGCGCTCTCGAGCTTTTTTGAGAGCTTGGAGAAGGAGAAAAGCGAG
TGCGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAACCTCAATTTCAAACTCTTAACCTAACCACTGCTTCTCGTCAGAAACACCGTCGCCGGAGCCGGAGGAAAGTACCGGCTACCTGCAATGTTAAGAAGATTCA
CCGAAACGGCGCTGTTTTTGCCTCGGAAGAACCGGATGAGAAGGAGGTCGTGGAACGGAAGATTCGCGCATTGCAGAGTATTGTACCGGGAGGTGAATCGCTTGGAGTCG
ACAAGTTGTTTGAACAGACGGCGGAGTATATAATGAACTTGCAGCATCAAGTGAAGGCCATGAGAGCGCTCTCGAGCTTTTTTGAGAGCTTGGAGAAGGAGAAAAGCGAG
TGCGGAGGTTGA
Protein sequenceShow/hide protein sequence
MDKPQFQTLNLTTASRQKHRRRSRRKVPATCNVKKIHRNGAVFASEEPDEKEVVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSE
CGG