; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15708 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15708
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type domain-containing protein
Genome locationCarg_Chr19:8788978..8789624
RNA-Seq ExpressionCarg15708
SyntenyCarg15708
Gene Ontology termsNA
InterPro domainsIPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061653.1 zf-C3HC4_3 domain-containing protein [Cucumis melo var. makuwa]3.6e-6890.91Show/hide
Query:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MER N GRRWANLKQRLGLKGMGCC GSWSPTSSTLTMIEG SLS HGSSRS REDG RSSA+SG+NLAMALAAERNLR+DEGGPTGA DVKSLMRLFEE
Subjt:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
        MDGGDWKTKRKE EN GDWMCCVCMERSKGAAFIPCGHTFCRV
Subjt:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV

KAG7012019.1 hypothetical protein SDJN02_26927, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-82100Show/hide
Query:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
Subjt:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRVKELIIVKEENS
        MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRVKELIIVKEENS
Subjt:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRVKELIIVKEENS

KGN47968.1 hypothetical protein Csa_002927 [Cucumis sativus]1.7e-6588.11Show/hide
Query:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MER N  RRW NL+QRLGLKGMGCC GSWSPTSSTLTMIEG SLS HGSSRS  EDG RSSA+SG+NLAMALAAERNLR DEGGPTG  DVKSLMRLFEE
Subjt:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
        MDGGDWKTKRKESEN GDWMCCVCMERSKGAAFIPCGHTFCRV
Subjt:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV

XP_022953088.1 RNA-binding protein MEX3B-like [Cucurbita moschata]2.8e-76100Show/hide
Query:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
Subjt:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
        MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
Subjt:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV

XP_023531397.1 uncharacterized protein LOC111793648 [Cucurbita pepo subsp. pepo]3.9e-6285.42Show/hide
Query:  MERQNGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFE
        MER N G+RWANLKQRLGL KGMGCCGGSWS TSSTLTMI+G+ LSRHGSSRSHR+DG RSSA+SG+NLAMALAAERNL T+EGGPT  G+VKSLMRLFE
Subjt:  MERQNGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFE

Query:  EMDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
        E+DGGDWKT+RKESEN GDW+CCVCMERSKGAAFIPCGHTFCRV
Subjt:  EMDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV

TrEMBL top hitse value%identityAlignment
A0A0A0KEL6 RING-type domain-containing protein8.2e-6688.11Show/hide
Query:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MER N  RRW NL+QRLGLKGMGCC GSWSPTSSTLTMIEG SLS HGSSRS  EDG RSSA+SG+NLAMALAAERNLR DEGGPTG  DVKSLMRLFEE
Subjt:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
        MDGGDWKTKRKESEN GDWMCCVCMERSKGAAFIPCGHTFCRV
Subjt:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV

A0A5A7V0I3 Zf-C3HC4_3 domain-containing protein1.8e-6890.91Show/hide
Query:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MER N GRRWANLKQRLGLKGMGCC GSWSPTSSTLTMIEG SLS HGSSRS REDG RSSA+SG+NLAMALAAERNLR+DEGGPTGA DVKSLMRLFEE
Subjt:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
        MDGGDWKTKRKE EN GDWMCCVCMERSKGAAFIPCGHTFCRV
Subjt:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV

A0A6J1GME5 RNA-binding protein MEX3B-like1.3e-76100Show/hide
Query:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
Subjt:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
        MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
Subjt:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV

A0A6J1HXI8 RNA-binding protein MEX3B-like1.3e-76100Show/hide
Query:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
        MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE
Subjt:  MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEE

Query:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
        MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
Subjt:  MDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV

A0A6J1JM70 RING finger protein 141-like5.5e-6284.72Show/hide
Query:  MERQNGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFE
        MER N G+RWANLKQRLGL KGMGCCGG+WS TSSTLTMI+G+ LSRHGSSRSHR+DG RSSA+SG+NLAMALAAERNL T+EGGPT  G+VKSLMRLFE
Subjt:  MERQNGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFE

Query:  EMDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
        E+DGGDWKT+RKESEN GDW+CCVCMERSKGAAFIPCGHTFCRV
Subjt:  EMDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G62370.1 RING/U-box superfamily protein3.0e-1237.18Show/hide
Query:  NGGRR----WANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGV-------------NLAMALAAERNLRTDEGGPTG
        NGG R    W  LKQRL    +GCCG    P +  L   E   +          ++     +  G              NLA ALA ER     E     
Subjt:  NGGRR----WANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGV-------------NLAMALAAERNLRTDEGGPTG

Query:  AGDVKSLMRLFEEMDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV
        A     LMRL  E DG D  T    +    D +CCVCM R KGAAFIPCGHT+CRV
Subjt:  AGDVKSLMRLFEEMDGGDWKTKRKESENTGDWMCCVCMERSKGAAFIPCGHTFCRV

AT3G25030.1 RING/U-box superfamily protein1.1e-0935.57Show/hide
Query:  WANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHG----SSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVK----SLMRLFEEM
        W +L+++L LK  G    S +   S  T I       H      S S       SS    + L   LA ER L   E       +V+    SLM L EE 
Subjt:  WANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHG----SSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVK----SLMRLFEEM

Query:  DGG------DWKTKRKESENT-GDWMCCVCMERSKGAAFIPCGHTFCRV
        +G       D + + + +  T  +  CCVCM RSKGAAFIPCGHTFCR+
Subjt:  DGG------DWKTKRKESENT-GDWMCCVCMERSKGAAFIPCGHTFCRV

AT3G25030.2 RING/U-box superfamily protein1.1e-0935.57Show/hide
Query:  WANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHG----SSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVK----SLMRLFEEM
        W +L+++L LK  G    S +   S  T I       H      S S       SS    + L   LA ER L   E       +V+    SLM L EE 
Subjt:  WANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHG----SSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVK----SLMRLFEEM

Query:  DGG------DWKTKRKESENT-GDWMCCVCMERSKGAAFIPCGHTFCRV
        +G       D + + + +  T  +  CCVCM RSKGAAFIPCGHTFCR+
Subjt:  DGG------DWKTKRKESENT-GDWMCCVCMERSKGAAFIPCGHTFCRV

AT4G03965.1 RING/U-box superfamily protein3.7e-1843.05Show/hide
Query:  RRWANLKQRLGLKGMGCCGGSWS--PTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGA-GDVK-SLMRLFEE---
        RR   LK+RLG K +GCCG +W    TS+T    +    +R  S   H         + G+NLA ALAAERN RT+E   +G+   +K SLMRL EE   
Subjt:  RRWANLKQRLGLKGMGCCGGSWS--PTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGA-GDVK-SLMRLFEE---

Query:  ---MDGGDWKTKRKESENT-----GDWMCCVCMERSKGAAFIPCGHTFCRV
           ++  + +     + +T      D +CCVCM R KGAAFIPCGHTFCRV
Subjt:  ---MDGGDWKTKRKESENT-----GDWMCCVCMERSKGAAFIPCGHTFCRV

AT4G22250.1 RING/U-box superfamily protein8.5e-1540Show/hide
Query:  MERQNGG----RRWANLKQRLGLKGMGCCGGSW-----------SPTS-----STLTMIEGLSL-SRHGSSRSHREDGARSSASSGVNLAMALAAERNLR
        + RQ  G    RR   LK+RL  K +GCCG +W           SPTS       L +  GL L S HGS              +G+NLA AL AER  R
Subjt:  MERQNGG----RRWANLKQRLGLKGMGCCGGSW-----------SPTS-----STLTMIEGLSL-SRHGSSRSHREDGARSSASSGVNLAMALAAERNLR

Query:  --TDEGGPTGAGDVKSLMRLFEEMDGGDWKTKRKESE---------NTGDWMCCVCMERSKGAAFIPCGHTFCRV
          + E          SLMRL EE          KE+E            D +CCVCM R KGAAFIPCGHTFCRV
Subjt:  --TDEGGPTGAGDVKSLMRLFEEMDGGDWKTKRKESE---------NTGDWMCCVCMERSKGAAFIPCGHTFCRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGGCAAAATGGAGGGCGGAGATGGGCCAATTTGAAGCAACGGCTAGGATTGAAGGGGATGGGATGCTGTGGAGGTTCGTGGAGTCCGACGTCGTCGACTTTGAC
GATGATTGAAGGCTTAAGCTTAAGCCGCCATGGAAGTAGCCGCAGCCATAGAGAAGATGGGGCTCGGAGCTCTGCATCTTCCGGTGTAAACTTGGCGATGGCTCTTGCGG
CGGAAAGAAATTTGAGGACCGACGAAGGAGGCCCCACTGGCGCCGGTGATGTGAAATCACTGATGAGATTATTTGAAGAAATGGACGGTGGGGATTGGAAGACAAAAAGA
AAGGAGAGTGAGAATACCGGTGATTGGATGTGCTGCGTTTGCATGGAGAGGAGTAAAGGTGCTGCCTTTATTCCCTGTGGACACACCTTCTGTAGGGTTAAGGAACTAAT
CATAGTAAAGGAGGAGAATAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCGGCAAAATGGAGGGCGGAGATGGGCCAATTTGAAGCAACGGCTAGGATTGAAGGGGATGGGATGCTGTGGAGGTTCGTGGAGTCCGACGTCGTCGACTTTGAC
GATGATTGAAGGCTTAAGCTTAAGCCGCCATGGAAGTAGCCGCAGCCATAGAGAAGATGGGGCTCGGAGCTCTGCATCTTCCGGTGTAAACTTGGCGATGGCTCTTGCGG
CGGAAAGAAATTTGAGGACCGACGAAGGAGGCCCCACTGGCGCCGGTGATGTGAAATCACTGATGAGATTATTTGAAGAAATGGACGGTGGGGATTGGAAGACAAAAAGA
AAGGAGAGTGAGAATACCGGTGATTGGATGTGCTGCGTTTGCATGGAGAGGAGTAAAGGTGCTGCCTTTATTCCCTGTGGACACACCTTCTGTAGGGTTAAGGAACTAAT
CATAGTAAAGGAGGAGAATAGTTGA
Protein sequenceShow/hide protein sequence
MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARSSASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEEMDGGDWKTKR
KESENTGDWMCCVCMERSKGAAFIPCGHTFCRVKELIIVKEENS