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Carg15714 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15714
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSmall ubiquitin-related modifier
Genome locationCarg_Chr19:8766030..8766534
RNA-Seq ExpressionCarg15714
SyntenyCarg15714
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572414.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3892.55Show/hide
Query:  MDENKEAPIRKPEAEPGTNYVNVKVNDQCISGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGGRVK
        MDENKEAPIRKPEAEPGTNYVNVKVN     GFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDG+EIDAMKHH GGGGGRVK
Subjt:  MDENKEAPIRKPEAEPGTNYVNVKVNDQCISGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGGRVK

KAG7012013.1 Small ubiquitin-related modifier 1 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-50100Show/hide
Query:  MDENKEAPIRKPEAEPGTNYVNVKVNDQCISGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGGRVKWVFSIL
        MDENKEAPIRKPEAEPGTNYVNVKVNDQCISGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGGRVKWVFSIL
Subjt:  MDENKEAPIRKPEAEPGTNYVNVKVNDQCISGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGGRVKWVFSIL

XP_022952738.1 small ubiquitin-related modifier 1-like [Cucurbita moschata]2.9e-3474.31Show/hide
Query:  MDENKEAPIRKPEAEPGT-NYVNVKVNDQCISGFV--------RGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGG
        MDEN+EAPIRKPEAEPG  NYVNVKVN Q  S             +   AYCKRQA+ELRTIAFLLDGHAIAGNQTADELGMEDG++IDAMKHHGGGGGG
Subjt:  MDENKEAPIRKPEAEPGT-NYVNVKVNDQCISGFV--------RGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGG

Query:  RVKWVFSIL
        RVKW+FS L
Subjt:  RVKWVFSIL

XP_022969393.1 small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]6.5e-3471.93Show/hide
Query:  MDENKEAPIRKPEAEPGTNYVNVKVNDQ---------C----ISGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHH-G
        MDEN+EAP RKPEA+PGTNYVNVKVN Q         C    +S  ++G     YCKRQA+ELRTIAFLLDGHAIAGNQTADELGMEDG+EIDAMKHH G
Subjt:  MDENKEAPIRKPEAEPGTNYVNVKVNDQ---------C----ISGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHH-G

Query:  GGGGGRVKWVFSIL
        GGGGGR+KWVFS L
Subjt:  GGGGGRVKWVFSIL

XP_023553983.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo]6.5e-3474.07Show/hide
Query:  MDENKEAPIRKPEAEPGTNYVNVKVNDQCISGF---VRGRNSV-----AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGGR
        MDEN+EAP RKPEAEPG+ YVNVKVN Q  S     +  R  +     AYCKRQA+EL TIAFLLDGHAI GNQTADELGMEDG+EIDAMKHHGGGGGGR
Subjt:  MDENKEAPIRKPEAEPGTNYVNVKVNDQCISGF---VRGRNSV-----AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGGR

Query:  VKWVFSIL
        VKWVFS L
Subjt:  VKWVFSIL

TrEMBL top hitse value%identityAlignment
A0A5A7V249 Small ubiquitin-related modifier 11.6e-1756.25Show/hide
Query:  EAPIRKPEAEPGTNYVNVKVNDQCISG--FVRGRNS------VAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGGRV
        E   RK E +P + YVN+KVN Q  S   F   + S       +YCKRQ +E  TIAFL+DGH IAG QTA+ELG+EDG+EIDAMKHH GGGGG +
Subjt:  EAPIRKPEAEPGTNYVNVKVNDQCISG--FVRGRNS------VAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGGRV

A0A6J1D1W9 small ubiquitin-related modifier 1-like1.7e-1652.13Show/hide
Query:  KEAPIRKPEAEPGTNYVNVKVNDQCISG-FVRGRNS-------VAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGG
        +E   RKPE+EP   YVN+KVN Q  S  + R R          +YC+RQ  + R +AFLLDGH I GNQT ++L ++DG+EIDAM HHGGGGG
Subjt:  KEAPIRKPEAEPGTNYVNVKVNDQCISG-FVRGRNS-------VAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGG

A0A6J1GLF8 Small ubiquitin-related modifier1.4e-3474.31Show/hide
Query:  MDENKEAPIRKPEAEPGT-NYVNVKVNDQCISGFV--------RGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGG
        MDEN+EAPIRKPEAEPG  NYVNVKVN Q  S             +   AYCKRQA+ELRTIAFLLDGHAIAGNQTADELGMEDG++IDAMKHHGGGGGG
Subjt:  MDENKEAPIRKPEAEPGT-NYVNVKVNDQCISGFV--------RGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGG

Query:  RVKWVFSIL
        RVKW+FS L
Subjt:  RVKWVFSIL

A0A6J1HW85 small ubiquitin-related modifier 1-like isoform X13.2e-1865.48Show/hide
Query:  MDENKEAPIRKPEAEPGTNYVNVKVNDQ---------C----ISGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADEL
        MDEN+EAP RKPEA+PGTNYVNVKVN Q         C    +S  ++G     YCKRQA+ELRTIAFLLDGHAIAGNQTADE+
Subjt:  MDENKEAPIRKPEAEPGTNYVNVKVNDQ---------C----ISGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADEL

A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X23.1e-3471.93Show/hide
Query:  MDENKEAPIRKPEAEPGTNYVNVKVNDQ---------C----ISGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHH-G
        MDEN+EAP RKPEA+PGTNYVNVKVN Q         C    +S  ++G     YCKRQA+ELRTIAFLLDGHAIAGNQTADELGMEDG+EIDAMKHH G
Subjt:  MDENKEAPIRKPEAEPGTNYVNVKVNDQ---------C----ISGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHH-G

Query:  GGGGGRVKWVFSIL
        GGGGGR+KWVFS L
Subjt:  GGGGGRVKWVFSIL

SwissProt top hitse value%identityAlignment
G2XKQ0 Small ubiquitin-related modifier 51.0e-0531.18Show/hide
Query:  EAEPGTNYVNVKVNDQCISGFVRGRNS-----------------VAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGG
        EA+P T ++  K+ D+ I   V G++S                  +YC+RQ + + ++ FL +G  IA N T +ELGME+ + I+  +   GG
Subjt:  EAEPGTNYVNVKVNDQCISGFVRGRNS-----------------VAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGG

O13351 Ubiquitin-like protein pmt3/smt35.0e-0532.14Show/hide
Query:  EAEPGTNYVNVKV----NDQCISGFVR----GRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGG
        + +P T ++N+KV    N++      +     +    YC RQ   + ++ FL+DG  I  +QT  EL MEDG++I+A+    GG
Subjt:  EAEPGTNYVNVKV----NDQCISGFVR----GRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGG

P55852 Small ubiquitin-related modifier 11.4e-1045.78Show/hide
Query:  GTNYVNVKVNDQCISG-FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGG
        G  ++N+KV  Q  +  F R + S        AYC RQ++++ +IAFL DG  +   QT DEL MEDG+EIDAM H  GG GG
Subjt:  GTNYVNVKVNDQCISG-FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGG

P55857 Small ubiquitin-related modifier 11.8e-1045.45Show/hide
Query:  RKPE-AEPGTNYVNVKVNDQCISG-FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGG
        +KP   E G  ++N+KV  Q  +  F R + S        AYC RQ++++  IAFL DG  + G QT DEL MEDG+EIDAM H  GG
Subjt:  RKPE-AEPGTNYVNVKVNDQCISG-FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGG

Q9FLP6 Small ubiquitin-related modifier 21.5e-0959.18Show/hide
Query:  AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGG
        AYC RQ+++  +IAFL DG  +   QT DEL MEDG+EIDAM H  GGG
Subjt:  AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGG

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 19.7e-1245.78Show/hide
Query:  GTNYVNVKVNDQCISG-FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGG
        G  ++N+KV  Q  +  F R + S        AYC RQ++++ +IAFL DG  +   QT DEL MEDG+EIDAM H  GG GG
Subjt:  GTNYVNVKVNDQCISG-FVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGG

AT5G55160.1 small ubiquitin-like modifier 21.1e-1059.18Show/hide
Query:  AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGG
        AYC RQ+++  +IAFL DG  +   QT DEL MEDG+EIDAM H  GGG
Subjt:  AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGG

AT5G55160.2 small ubiquitin-like modifier 21.1e-1059.18Show/hide
Query:  AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGG
        AYC RQ+++  +IAFL DG  +   QT DEL MEDG+EIDAM H  GGG
Subjt:  AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGG

AT5G55170.1 small ubiquitin-like modifier 36.1e-0646.81Show/hide
Query:  YCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGG
        YC R+ ++L   AF+ +G  I G +T DEL MEDG+ IDA +   GG
Subjt:  YCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGG

AT5G55856.1 Ubiquitin-like superfamily protein1.4e-0536.71Show/hide
Query:  TNYVNVKV-NDQCISGFVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGG
        ++++ VKV N   I  + R +  V       AY  +  +E+ T+ FL DG+ I  NQT +ELG+ED +EI+A     GG
Subjt:  TNYVNVKV-NDQCISGFVRGRNSV-------AYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAAATAAGGAAGCACCGATCCGGAAACCCGAAGCAGAACCCGGAACGAACTATGTCAACGTGAAGGTCAACGATCAGTGTATTTCAGGATTTGTAAGAGGACG
CAACTCAGTAGCGTACTGTAAACGACAAGCGATGGAGCTGAGAACCATTGCGTTTCTGTTGGACGGCCATGCCATTGCCGGAAACCAAACAGCCGATGAGCTGGGAATGG
AGGATGGGAATGAAATTGATGCTATGAAACACCACGGCGGCGGCGGCGGCGGAAGAGTAAAGTGGGTCTTTTCCATTCTCTGA
mRNA sequenceShow/hide mRNA sequence
CGGAAATGTAGACAACGATGGATGAAAATAAGGAAGCACCGATCCGGAAACCCGAAGCAGAACCCGGAACGAACTATGTCAACGTGAAGGTCAACGATCAGTGTATTTCA
GGATTTGTAAGAGGACGCAACTCAGTAGCGTACTGTAAACGACAAGCGATGGAGCTGAGAACCATTGCGTTTCTGTTGGACGGCCATGCCATTGCCGGAAACCAAACAGC
CGATGAGCTGGGAATGGAGGATGGGAATGAAATTGATGCTATGAAACACCACGGCGGCGGCGGCGGCGGAAGAGTAAAGTGGGTCTTTTCCATTCTCTGA
Protein sequenceShow/hide protein sequence
MDENKEAPIRKPEAEPGTNYVNVKVNDQCISGFVRGRNSVAYCKRQAMELRTIAFLLDGHAIAGNQTADELGMEDGNEIDAMKHHGGGGGGRVKWVFSIL