; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15752 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15752
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCalcium-binding EF-hand family protein
Genome locationCarg_Chr04:18671949..18672305
RNA-Seq ExpressionCarg15752
SyntenyCarg15752
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602129.1 putative calcium-binding protein CML44, partial [Cucurbita argyrosperma subsp. sororia]3.7e-60100Show/hide
Query:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
        MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
Subjt:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL

Query:  DGMLDFEEFKNMMSLTSS
        DGMLDFEEFKNMMSLTSS
Subjt:  DGMLDFEEFKNMMSLTSS

KAG7032829.1 putative calcium-binding protein CML44, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-60100Show/hide
Query:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
        MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
Subjt:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL

Query:  DGMLDFEEFKNMMSLTSS
        DGMLDFEEFKNMMSLTSS
Subjt:  DGMLDFEEFKNMMSLTSS

XP_022959484.1 probable calcium-binding protein CML44 [Cucurbita moschata]2.4e-5998.31Show/hide
Query:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
        MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVD+VYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
Subjt:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL

Query:  DGMLDFEEFKNMMSLTSS
        DGMLDFEEFKNMMSL SS
Subjt:  DGMLDFEEFKNMMSLTSS

XP_022989807.1 probable calcium-binding protein CML44 [Cucurbita maxima]4.2e-5694.07Show/hide
Query:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
        MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNARE+DVDIVYMAFKVFDMNDDGFISCEELQ VLSRLE+WDVN +  DCKSMIRAYDTNL
Subjt:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL

Query:  DGMLDFEEFKNMMSLTSS
        DGMLDFEEFKNMMSLTSS
Subjt:  DGMLDFEEFKNMMSLTSS

XP_023527806.1 probable calcium-binding protein CML44 [Cucurbita pepo subsp. pepo]3.5e-5594.92Show/hide
Query:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
        MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVS VNAREED+DIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVN    DCKSMIRAYDTNL
Subjt:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL

Query:  DGMLDFEEFKNMMSLTSS
        DGMLDFEEFKNMMSLTSS
Subjt:  DGMLDFEEFKNMMSLTSS

TrEMBL top hitse value%identityAlignment
A0A6J1CJ36 probable calcium-binding protein CML441.0e-4476Show/hide
Query:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVS-------DVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMI
        ME+L S LEKPSLDFNEFLFFYESISK+NKGEC GGV        D +  EEDVDIVYMAFKVFDMNDDGFISCEEL+ VL RLELWD N +D++C++MI
Subjt:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVS-------DVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMI

Query:  RAYDTNLDGMLDFEEFKNMMSLTSS
        RAYDTNLDG LDFEEFKNMM LT+S
Subjt:  RAYDTNLDGMLDFEEFKNMMSLTSS

A0A6J1FLU5 probable calcium-binding protein CML441.8e-4477.97Show/hide
Query:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNA-REEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTN
        ME+L SFLEKPSLDF+EFLFFYESISKQNKGECKGG+ D +   EEDV+IVYMAFKVFD+N DGFISCEEL+ VLSRLELWD N ++ DC+SMIRAYDTN
Subjt:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNA-REEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTN

Query:  LDGMLDFEEFKNMMSLTS
        LDG LDFEEF NMM  T+
Subjt:  LDGMLDFEEFKNMMSLTS

A0A6J1H868 probable calcium-binding protein CML441.1e-5998.31Show/hide
Query:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
        MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVD+VYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
Subjt:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL

Query:  DGMLDFEEFKNMMSLTSS
        DGMLDFEEFKNMMSL SS
Subjt:  DGMLDFEEFKNMMSLTSS

A0A6J1JGU4 probable calcium-binding protein CML442.0e-5694.07Show/hide
Query:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
        MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNARE+DVDIVYMAFKVFDMNDDGFISCEELQ VLSRLE+WDVN +  DCKSMIRAYDTNL
Subjt:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL

Query:  DGMLDFEEFKNMMSLTSS
        DGMLDFEEFKNMMSLTSS
Subjt:  DGMLDFEEFKNMMSLTSS

A0A6J1K1Y7 probable calcium-binding protein CML444.4e-4376.27Show/hide
Query:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNARE-EDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTN
        ME+L SFLEKPSLDF+EFL FYES+SKQNKGECKGG+ D +  E EDV+IVYMAFKVFD+N DGFISCEEL+ VLSRLELWD N ++ DC+SMIRAYDTN
Subjt:  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNARE-EDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTN

Query:  LDGMLDFEEFKNMMSLTS
        LDG LDFEEF NMM  T+
Subjt:  LDGMLDFEEFKNMMSLTS

SwissProt top hitse value%identityAlignment
Q5SND2 Probable calcium-binding protein CML306.1e-1036.89Show/hide
Query:  LDFNEFLFFYESISKQNKG--------------ECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLEL--WDVNTTDTDCKSMIRAY
        +D +EF   Y+SI K+ K               E      +  A EE+ D+   AF VFD N DG IS EEL  VL  L L          +C+ MIR  
Subjt:  LDFNEFLFFYESISKQNKG--------------ECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLEL--WDVNTTDTDCKSMIRAY

Query:  DTNLDGMLDFEEFKNMMSLTSS
        D++ DGM+ FEEFK MM++  +
Subjt:  DTNLDGMLDFEEFKNMMSLTSS

Q9LPK5 Probable calcium-binding protein CML449.8e-1641.59Show/hide
Query:  EDLHSFLEKPSLDFNEFL-FFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
        ++L   + K SLD +EFL F+Y+++      + KG   +++   ++ + +  AF VFD+N DG+IS EEL+ VL RL  ++      DC  MIR +D NL
Subjt:  EDLHSFLEKPSLDFNEFL-FFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL

Query:  DGMLDFEEFKNMM
        DG +DFEEFKNM+
Subjt:  DGMLDFEEFKNMM

Q9SRR7 Calmodulin-like protein 32.3e-0938.98Show/hide
Query:  EDLHSFLEKPSL------DFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRA
        +DL   +EK  L      D  EF   Y++I ++              R+E+ D +  AF VFD N DGFI+ EEL+ VL+ L L    T + DCK MI  
Subjt:  EDLHSFLEKPSL------DFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRA

Query:  YDTNLDGMLDFEEFKNMM
         D + DGM++F+EFK MM
Subjt:  YDTNLDGMLDFEEFKNMM

Q9SU00 Calmodulin-like protein 22.3e-0948.65Show/hide
Query:  VNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMM
        V  +EE+ D +  AF+VFD N DGFI+ EEL+ VL+ + L    T + DCK MI   D + DGM++F+EFK MM
Subjt:  VNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMM

Q9SVG9 Calcium-binding protein CML421.4e-0937.7Show/hide
Query:  MEDLHSFLE------KPSLDFNEFLFFYESISKQ-NKGECKGGVS--DVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKS
        + DL S +E         L+F++F   ++++      G C GG +  D ++  E+   +  AFKVFD N DGFIS  ELQ VL +L L +    +   + 
Subjt:  MEDLHSFLE------KPSLDFNEFLFFYESISKQ-NKGECKGGVS--DVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKS

Query:  MIRAYDTNLDGMLDFEEFKNMM
        MI + D N DG +DF EFKNMM
Subjt:  MIRAYDTNLDGMLDFEEFKNMM

Arabidopsis top hitse value%identityAlignment
AT1G05990.1 EF hand calcium-binding protein family8.2e-1039.6Show/hide
Query:  LDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNM
        +D +EF   Y++I  +   E           EED+     AF VFD N DGFI+ +EL+ VLS L L    T D DCK MI+  D + DG ++++EF+ M
Subjt:  LDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNM

Query:  M
        M
Subjt:  M

AT1G21550.1 Calcium-binding EF-hand family protein7.0e-1741.59Show/hide
Query:  EDLHSFLEKPSLDFNEFL-FFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL
        ++L   + K SLD +EFL F+Y+++      + KG   +++   ++ + +  AF VFD+N DG+IS EEL+ VL RL  ++      DC  MIR +D NL
Subjt:  EDLHSFLEKPSLDFNEFL-FFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNL

Query:  DGMLDFEEFKNMM
        DG +DFEEFKNM+
Subjt:  DGMLDFEEFKNMM

AT3G07490.1 ARF-GAP domain 111.7e-1038.98Show/hide
Query:  EDLHSFLEKPSL------DFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRA
        +DL   +EK  L      D  EF   Y++I ++              R+E+ D +  AF VFD N DGFI+ EEL+ VL+ L L    T + DCK MI  
Subjt:  EDLHSFLEKPSL------DFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRA

Query:  YDTNLDGMLDFEEFKNMM
         D + DGM++F+EFK MM
Subjt:  YDTNLDGMLDFEEFKNMM

AT4G12860.1 EF hand calcium-binding protein family1.7e-1048.65Show/hide
Query:  VNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMM
        V  +EE+ D +  AF+VFD N DGFI+ EEL+ VL+ + L    T + DCK MI   D + DGM++F+EFK MM
Subjt:  VNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMM

AT4G20780.1 calmodulin like 429.7e-1137.7Show/hide
Query:  MEDLHSFLE------KPSLDFNEFLFFYESISKQ-NKGECKGGVS--DVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKS
        + DL S +E         L+F++F   ++++      G C GG +  D ++  E+   +  AFKVFD N DGFIS  ELQ VL +L L +    +   + 
Subjt:  MEDLHSFLE------KPSLDFNEFLFFYESISKQ-NKGECKGGVS--DVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKS

Query:  MIRAYDTNLDGMLDFEEFKNMM
        MI + D N DG +DF EFKNMM
Subjt:  MIRAYDTNLDGMLDFEEFKNMM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACTTGCACTCATTTCTAGAGAAACCAAGCCTCGACTTCAACGAGTTCTTGTTCTTTTATGAATCGATATCGAAGCAAAACAAAGGCGAGTGCAAGGGAGGTGT
GAGCGATGTCAACGCAAGAGAGGAAGATGTCGACATTGTATATATGGCGTTTAAAGTGTTCGATATGAACGATGATGGCTTCATTTCTTGTGAGGAGCTACAACTTGTGT
TGTCAAGACTAGAGCTTTGGGATGTAAACACAACTGATACTGATTGTAAAAGTATGATCCGCGCTTATGATACCAATTTGGATGGGATGCTTGATTTCGAGGAGTTTAAG
AACATGATGTCGTTGACAAGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGACTTGCACTCATTTCTAGAGAAACCAAGCCTCGACTTCAACGAGTTCTTGTTCTTTTATGAATCGATATCGAAGCAAAACAAAGGCGAGTGCAAGGGAGGTGT
GAGCGATGTCAACGCAAGAGAGGAAGATGTCGACATTGTATATATGGCGTTTAAAGTGTTCGATATGAACGATGATGGCTTCATTTCTTGTGAGGAGCTACAACTTGTGT
TGTCAAGACTAGAGCTTTGGGATGTAAACACAACTGATACTGATTGTAAAAGTATGATCCGCGCTTATGATACCAATTTGGATGGGATGCTTGATTTCGAGGAGTTTAAG
AACATGATGTCGTTGACAAGTTCTTGA
Protein sequenceShow/hide protein sequence
MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFK
NMMSLTSS