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Carg15766 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15766
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:18778344..18779508
RNA-Seq ExpressionCarg15766
SyntenyCarg15766
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032843.1 hypothetical protein SDJN02_06893, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-117100Show/hide
Query:  MALQEKGRGTEWQTQISAKKEKNGHRSYKFTNSNKSSLLQRRIKEEILDETIMSFPIFTQHDDDIHIQDEKQEEEEEEEEDLKTISNEWDSSNLEILVNG
        MALQEKGRGTEWQTQISAKKEKNGHRSYKFTNSNKSSLLQRRIKEEILDETIMSFPIFTQHDDDIHIQDEKQEEEEEEEEDLKTISNEWDSSNLEILVNG
Subjt:  MALQEKGRGTEWQTQISAKKEKNGHRSYKFTNSNKSSLLQRRIKEEILDETIMSFPIFTQHDDDIHIQDEKQEEEEEEEEDLKTISNEWDSSNLEILVNG

Query:  GGQGGFGYSPNDALSLLSILEEQNCGNASNPIFRGYIWAGVCIELQTHDFPCIILRQFPNHWLNHLTRSTPRRPKFHQHRLFTLHHQLIPTRLCNLFHCN
        GGQGGFGYSPNDALSLLSILEEQNCGNASNPIFRGYIWAGVCIELQTHDFPCIILRQFPNHWLNHLTRSTPRRPKFHQHRLFTLHHQLIPTRLCNLFHCN
Subjt:  GGQGGFGYSPNDALSLLSILEEQNCGNASNPIFRGYIWAGVCIELQTHDFPCIILRQFPNHWLNHLTRSTPRRPKFHQHRLFTLHHQLIPTRLCNLFHCN

Query:  LREKQSRISKP
        LREKQSRISKP
Subjt:  LREKQSRISKP
TrEMBL top hitse value%identityAlignment
T1L890 Uncharacterized protein5.5e-0429.52Show/hide
Query:  VNGGGQGGFGYSPNDALSLLSILEEQNCGNASNPIFRGYIWAGVCIELQTHDFPCIILRQFPNHWLNHLTRSTPRRPKFHQHRLFTLHHQLIPTRLCNLF
        V+ GGQ       ND L  L++LE+++ G+AS+ I RG++   +C+  QT     + L Q  +  ++    + P RP+  QH        L+P  L ++ 
Subjt:  VNGGGQGGFGYSPNDALSLLSILEEQNCGNASNPIFRGYIWAGVCIELQTHDFPCIILRQFPNHWLNHLTRSTPRRPKFHQHRLFTLHHQLIPTRLCNLF

Query:  HCNLR
        HC  +
Subjt:  HCNLR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTGCAAGAGAAAGGCCGAGGCACAGAATGGCAAACACAGATTTCCGCCAAGAAAGAAAAAAATGGGCACAGAAGTTACAAATTCACAAACTCAAACAAGTCATC
GCTACTACAACGGAGAATTAAAGAAGAGATTCTTGATGAAACGATTATGAGTTTTCCAATTTTTACACAACATGATGATGATATTCATATACAAGATGAAAAACAAGAAG
AAGAAGAAGAAGAAGAAGAAGATTTGAAGACCATCTCTAATGAATGGGATTCTTCAAACCTCGAGATACTTGTCAATGGAGGCGGACAAGGTGGATTTGGGTACAGCCCC
AATGACGCCCTCTCTCTTCTGTCCATTCTTGAAGAACAGAACTGTGGGAATGCTTCTAATCCCATATTTCGAGGCTACATTTGGGCTGGCGTCTGTATTGAGCTTCAAAC
ACACGATTTTCCCTGCATAATCCTGCGCCAATTCCCTAATCACTGGCTCAATCATCTTACACGGTCCACACCACGGCGCCCAAAATTCCACCAGCACCGTCTTTTCACTC
TCCACCACCAACTCATTCCAACTCGACTCTGTAACCTCTTTCACTGCAATTTACGAGAAAAACAGAGTCGAATTTCTAAACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTGCAAGAGAAAGGCCGAGGCACAGAATGGCAAACACAGATTTCCGCCAAGAAAGAAAAAAATGGGCACAGAAGTTACAAATTCACAAACTCAAACAAGTCATC
GCTACTACAACGGAGAATTAAAGAAGAGATTCTTGATGAAACGATTATGAGTTTTCCAATTTTTACACAACATGATGATGATATTCATATACAAGATGAAAAACAAGAAG
AAGAAGAAGAAGAAGAAGAAGATTTGAAGACCATCTCTAATGAATGGGATTCTTCAAACCTCGAGATACTTGTCAATGGAGGCGGACAAGGTGGATTTGGGTACAGCCCC
AATGACGCCCTCTCTCTTCTGTCCATTCTTGAAGAACAGAACTGTGGGAATGCTTCTAATCCCATATTTCGAGGCTACATTTGGGCTGGCGTCTGTATTGAGCTTCAAAC
ACACGATTTTCCCTGCATAATCCTGCGCCAATTCCCTAATCACTGGCTCAATCATCTTACACGGTCCACACCACGGCGCCCAAAATTCCACCAGCACCGTCTTTTCACTC
TCCACCACCAACTCATTCCAACTCGACTCTGTAACCTCTTTCACTGCAATTTACGAGAAAAACAGAGTCGAATTTCTAAACCCTAG
Protein sequenceShow/hide protein sequence
MALQEKGRGTEWQTQISAKKEKNGHRSYKFTNSNKSSLLQRRIKEEILDETIMSFPIFTQHDDDIHIQDEKQEEEEEEEEDLKTISNEWDSSNLEILVNGGGQGGFGYSP
NDALSLLSILEEQNCGNASNPIFRGYIWAGVCIELQTHDFPCIILRQFPNHWLNHLTRSTPRRPKFHQHRLFTLHHQLIPTRLCNLFHCNLREKQSRISKP