; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15779 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15779
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein MKS1-like
Genome locationCarg_Chr04:18851470..18851958
RNA-Seq ExpressionCarg15779
SyntenyCarg15779
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578908.1 Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia]3.1e-3356.89Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE
        MAERK LQL G RP+ALKI+K SH I KPP        HRPVIIYT SPK+IHT+PTQFKDLVQRLTG +  + D H   + T+ M      S+  QG E
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE

Query:  SVGRFPTGILPPTSELLPPIMPTL----PSTSMDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH
         VG    GIL PT  LLPPI   +    P  S +LS LTH+F+D S IAPN F+SSLDFF NFPD H
Subjt:  SVGRFPTGILPPTSELLPPIMPTL----PSTSMDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH

KAG6602164.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.0e-8198.16Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKK-PPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGV
        MAERKHLQLHGHRPSALKISKHSHNIKK PPPLPPPP QHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQ DTPDIHQVQSKTISMSMSMPTSSTEQGV
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKK-PPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGV

Query:  ESVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
        ESVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
Subjt:  ESVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH

KAG7032856.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-84100Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE
        MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE

Query:  SVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
        SVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
Subjt:  SVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH

XP_022959576.1 protein MKS1-like [Cucurbita moschata]4.4e-7290.74Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE
        MAERKHLQLHGHRPSALKISKHSHNI+K     PPP QHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQ DTPDIHQVQSKTISMSMSMPTSSTEQGVE
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE

Query:  SVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
        SVG FPTGILPPTSELL PIMP  PS S DLSSLTHYFQDSSIAPNNFASSLDFFDNFP FH
Subjt:  SVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH

XP_023542758.1 protein MKS1-like [Cucurbita pepo subsp. pepo]9.1e-7087.65Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE
        MAERKHL LHGHRPSALKISKHSHNIKKPPPLPPPP QHRPVIIYTDSPKIIHTNPTQFKDLVQRLTG Q ++PDIHQVQSKTISMS SMPTSSTEQGVE
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE

Query:  SVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
        S+ RFPTGIL PT E LP      PS S DLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
Subjt:  SVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH

TrEMBL top hitse value%identityAlignment
A0A0A0KI80 VQ domain-containing protein1.2e-2750.53Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSM-----------S
        M E+K LQL G RPSALKI+K SH IKKPP   PPP  HRPVIIYT SPKIIHT+PT+FKDLVQRLTG        HQ  S + + ++           S
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSM-----------S

Query:  MPTS----STEQGVESVGRFPTGILPPTSELLPPIMPTL---------PSTSMDLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDFH
        +PT+      + GV+ +     GIL PT  LLPPI  T+          + + DL+SLT +F D S IA N+F+SSLDFF  NFPDFH
Subjt:  MPTS----STEQGVESVGRFPTGILPPTSELLPPIMPTL---------PSTSMDLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDFH

A0A5A7UZA1 Protein MKS1-like5.5e-2852.43Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSM----------SM
        M E+K LQL G RPSALKI+K SH IKKPP   PPP  HRPVIIYT SPKIIHT+PTQFKDLVQRLTG        HQ  S + + ++          S+
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSM----------SM

Query:  P-TSSTEQGVESVGR-FPTGILPPTSELLPPIMPTLPST---------SMDLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDFH
        P T + +     V R    GIL PT  LLPPI PT+ ST         + DL+SLT +F D S I  N+F+ SLDFF  NFPDFH
Subjt:  P-TSSTEQGVESVGR-FPTGILPPTSELLPPIMPTLPST---------SMDLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDFH

A0A6J1FKV1 protein MKS1-like7.4e-3356.29Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE
        MAERK LQL G RP+ALKI+K SH I KPP        HRPVIIYT SPK+IHT+PTQFKDLVQRLTG +  + D H   + T+ M      S+  QG E
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE

Query:  SVGRFPTGILPPTSELLPPIMPTL----PSTSMDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH
         VG    GIL PT  LLPPI   +    P  S +LS LTH+F+D S IAPN F+ SLDFF NFPD H
Subjt:  SVGRFPTGILPPTSELLPPIMPTL----PSTSMDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH

A0A6J1H588 protein MKS1-like2.1e-7290.74Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE
        MAERKHLQLHGHRPSALKISKHSHNI+K     PPP QHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQ DTPDIHQVQSKTISMSMSMPTSSTEQGVE
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE

Query:  SVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
        SVG FPTGILPPTSELL PIMP  PS S DLSSLTHYFQDSSIAPNNFASSLDFFDNFP FH
Subjt:  SVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH

A0A6J1JW33 protein MKS1-like2.4e-3154.49Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE
        MAERK +QL G RP+ALKI+K SH I KPP        HRPVIIY+ SPK+IHT+PTQFKDLVQRLTG +  + D H   + T+ M      S+   G E
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVE

Query:  SVGRFPTGILPPTSELLPPIMPTL----PSTSMDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH
         VG    GIL PT  LLPPI   +    P  S +LS LTH+F+D S IAPN F+ SLDFF NFPD H
Subjt:  SVGRFPTGILPPTSELLPPIMPTL----PSTSMDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B5.1e-0742Show/hide
Query:  GHRPSALKISKHSHNIKKPPPLPPP-------------PLQHR----PVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTS
        G +P+ LK+   SH I K PPL PP             P Q R    PV IYT +P+IIHT+P  F  LVQRLTG         Q  + T S S S  TS
Subjt:  GHRPSALKISKHSHNIKKPPPLPPP-------------PLQHR----PVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTS

Q8LGD5 Protein MKS11.1e-0944Show/hide
Query:  ERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPP---------LQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTG
        +++ LQ+ G RPS L + K SH IKKPP  P PP         +   PV+IY  SPK++H   ++F ++VQRLTG
Subjt:  ERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPP---------LQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTG

Q9CA36 VQ motif-containing protein 8, chloroplastic2.3e-0750Show/hide
Query:  QLHGHRPSALKISKHSHNIKKPPPLPPPPLQH---RPVIIYTDSPKIIHTNPTQFKDLVQRLTG
        +++G RPS+LK++  SH IKK       P  H    PVIIY  SPK+IHT    F  LVQRLTG
Subjt:  QLHGHRPSALKISKHSHNIKKPPPLPPPPLQH---RPVIIYTDSPKIIHTNPTQFKDLVQRLTG

Q9LS54 VQ motif-containing protein 206.7e-0741.57Show/hide
Query:  PSALKISKHSHNIKKPP---PLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQS-------KTISMSMSMPT
        P  LK++K SH IKKPP             PVIIYT +P+IIHTNP  F  LVQ+LTG      D+    +       K+I+ ++S PT
Subjt:  PSALKISKHSHNIKKPP---PLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQS-------KTISMSMSMPT

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding3.6e-0842Show/hide
Query:  GHRPSALKISKHSHNIKKPPPLPPP-------------PLQHR----PVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTS
        G +P+ LK+   SH I K PPL PP             P Q R    PV IYT +P+IIHT+P  F  LVQRLTG         Q  + T S S S  TS
Subjt:  GHRPSALKISKHSHNIKKPPPLPPP-------------PLQHR----PVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTS

AT1G21326.1 VQ motif-containing protein7.3e-0943.56Show/hide
Query:  GHRPSALKISKHSHNIKKPPPLPPP-------------PLQHR----PVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTS
        G RP  LK+   SH I K PPL PP             P Q R    PVIIYT SP+IIHT+P  F  LVQRLTG         +  + T S S S  TS
Subjt:  GHRPSALKISKHSHNIKKPPPLPPP-------------PLQHR----PVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTS

Query:  S
        +
Subjt:  S

AT1G68450.1 VQ motif-containing protein1.6e-0850Show/hide
Query:  QLHGHRPSALKISKHSHNIKKPPPLPPPPLQH---RPVIIYTDSPKIIHTNPTQFKDLVQRLTG
        +++G RPS+LK++  SH IKK       P  H    PVIIY  SPK+IHT    F  LVQRLTG
Subjt:  QLHGHRPSALKISKHSHNIKKPPPLPPPPLQH---RPVIIYTDSPKIIHTNPTQFKDLVQRLTG

AT3G18360.1 VQ motif-containing protein4.8e-0841.57Show/hide
Query:  PSALKISKHSHNIKKPP---PLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQS-------KTISMSMSMPT
        P  LK++K SH IKKPP             PVIIYT +P+IIHTNP  F  LVQ+LTG      D+    +       K+I+ ++S PT
Subjt:  PSALKISKHSHNIKKPP---PLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQS-------KTISMSMSMPT

AT3G18690.1 MAP kinase substrate 17.8e-1144Show/hide
Query:  ERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPP---------LQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTG
        +++ LQ+ G RPS L + K SH IKKPP  P PP         +   PV+IY  SPK++H   ++F ++VQRLTG
Subjt:  ERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPP---------LQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAAGAAAACACCTTCAACTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCAAAAAGCCGCCGCCGCTCCCCCCGCCACCGCT
GCAGCACCGCCCCGTCATAATCTACACCGACTCTCCCAAGATCATCCACACCAATCCTACCCAATTCAAGGACTTAGTCCAACGCCTCACTGGTTGCCAACTTGATACTC
CTGACATTCATCAGGTCCAATCCAAGACAATATCAATGTCTATGTCGATGCCAACGAGTAGTACCGAACAAGGAGTCGAGAGTGTAGGTCGTTTCCCAACTGGGATATTA
CCTCCGACGTCGGAGTTGTTACCGCCCATTATGCCGACGCTGCCATCGACGTCAATGGATCTCAGCTCTCTCACCCACTACTTCCAAGATAGCTCCATAGCTCCTAATAA
TTTTGCATCGTCGCTAGATTTCTTCGATAACTTCCCTGATTTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAAGAAAACACCTTCAACTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCAAAAAGCCGCCGCCGCTCCCCCCGCCACCGCT
GCAGCACCGCCCCGTCATAATCTACACCGACTCTCCCAAGATCATCCACACCAATCCTACCCAATTCAAGGACTTAGTCCAACGCCTCACTGGTTGCCAACTTGATACTC
CTGACATTCATCAGGTCCAATCCAAGACAATATCAATGTCTATGTCGATGCCAACGAGTAGTACCGAACAAGGAGTCGAGAGTGTAGGTCGTTTCCCAACTGGGATATTA
CCTCCGACGTCGGAGTTGTTACCGCCCATTATGCCGACGCTGCCATCGACGTCAATGGATCTCAGCTCTCTCACCCACTACTTCCAAGATAGCTCCATAGCTCCTAATAA
TTTTGCATCGTCGCTAGATTTCTTCGATAACTTCCCTGATTTTCATTAA
Protein sequenceShow/hide protein sequence
MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVESVGRFPTGIL
PPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH