; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15813 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15813
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDEAD-box ATP-dependent RNA helicase 39-like
Genome locationCarg_Chr04:19068992..19072942
RNA-Seq ExpressionCarg15813
SyntenyCarg15813
Gene Ontology termsGO:1902775 - mitochondrial large ribosomal subunit assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR002004 - Polyadenylate-binding protein/Hyperplastic disc protein
IPR011545 - DEAD/DEAH box helicase domain
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR036053 - PABC (PABP) domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602207.1 DEAD-box ATP-dependent RNA helicase 39, partial [Cucurbita argyrosperma subsp. sororia]1.0e-16586.34Show/hide
Query:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
        MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
Subjt:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG

Query:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
        EKVMTGFKELGLYNEVAEAVE MGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
Subjt:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA

Query:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL------------------------------------------
        KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL                                          
Subjt:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL------------------------------------------

Query:  -----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT
             MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLA+AVESLR STNRT
Subjt:  -----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT

KAG7032889.1 DEAD-box ATP-dependent RNA helicase 39 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-174100Show/hide
Query:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
        MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
Subjt:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG

Query:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
        EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
Subjt:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA

Query:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDT
        KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDT
Subjt:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDT

Query:  LKCKLANAVESLRVSTNRT
        LKCKLANAVESLRVSTNRT
Subjt:  LKCKLANAVESLRVSTNRT

XP_022959642.1 DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita moschata]5.3e-16284.97Show/hide
Query:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
        MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASR+FS  FSRT TTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
Subjt:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG

Query:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
        EKVMTGFKELGLYNEVAEA E MGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
Subjt:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA

Query:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL------------------------------------------
        KFISNY+QLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL                                          
Subjt:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL------------------------------------------

Query:  -----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT
             MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLA+AVESLRVSTNRT
Subjt:  -----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT

XP_022990794.1 DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita maxima]8.4e-15280.87Show/hide
Query:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
        MGSRRKALLEL HY+NSLSCPTK + FHNPV S NAFLASR+FS  FSRT  TENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
Subjt:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG

Query:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
        EKVMTGFKELGLYNEVAEA E MGFFVPSEL CVGIPALLEGKNVVLGSLYGPERAL YLLPLIQNLKRDAK+NGVRSKHPRAFVMCSTTELSDEVFQMA
Subjt:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA

Query:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL------------------------------------------
        KFISNY+QLKTAKDNGFG+LELQNGASDVSIGLLIGTPNEVSELIEDGS+VSDEIKYL                                          
Subjt:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL------------------------------------------

Query:  -----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT
             MLH+QHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLA+AVESLR STNRT
Subjt:  -----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT

XP_023512464.1 DEAD-box ATP-dependent RNA helicase 39-like isoform X1 [Cucurbita pepo subsp. pepo]3.1e-14680.9Show/hide
Query:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
        MGSRRKALLELYHY NSLSCPTKGNVFHNPV STNAFLASRHFS  FSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
Subjt:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG

Query:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
        EKVMTGFKELGLY+EVAEA E MGFFVPS LHCVGIPALLEGKNVVLGSLY PERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
Subjt:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA

Query:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL------------------------------------------
        KFISNY+QLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL                                          
Subjt:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL------------------------------------------

Query:  -----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAV
             MLHEQHSSLV         EIAAMLLEIEEEE FHLMESPDTLKCKLA+AV
Subjt:  -----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAV

TrEMBL top hitse value%identityAlignment
A0A1S3C4L0 DEAD-box ATP-dependent RNA helicase 39-like1.7e-10260.82Show/hide
Query:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFT----TENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGS
        MGSRRKALLEL H  N L  PTK ++F N   S NA LAS   S  FSR+       END+PP+++R++ LLEKFR RKLKG S IS+ S SS       
Subjt:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFT----TENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGS

Query:  GNGGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEV
         NGGEKVMTGF++LGL NE+A AVEEMG   PSEL C  IPA+LEGKNVVLG L GPERALAYLLPLIQNLKRD K  G RSKHPRAFVMC T +LS+E+
Subjt:  GNGGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEV

Query:  FQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL--------------------------------------
        F MAK+ISNYRQLKT +DN  G+LELQ  ASDVSIGLLIGTP+E+SELIE+GSVV DEI YL                                      
Subjt:  FQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL--------------------------------------

Query:  ----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT
            M+HEQ SSLV+SL+  D GEIAAM+LEIEEEEAFHLMESPD LK KLA+ VESLR ST  T
Subjt:  ----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT

A0A5A7SLY8 DEAD-box ATP-dependent RNA helicase 39-like1.7e-10260.82Show/hide
Query:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFT----TENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGS
        MGSRRKALLEL H  N L  PTK ++F N   S NA LAS   S  FSR+       END+PP+++R++ LLEKFR RKLKG S IS+ S SS       
Subjt:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFT----TENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGS

Query:  GNGGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEV
         NGGEKVMTGF++LGL NE+A AVEEMG   PSEL C  IPA+LEGKNVVLG L GPERALAYLLPLIQNLKRD K  G RSKHPRAFVMC T +LS+E+
Subjt:  GNGGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEV

Query:  FQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL--------------------------------------
        F MAK+ISNYRQLKT +DN  G+LELQ  ASDVSIGLLIGTP+E+SELIE+GSVV DEI YL                                      
Subjt:  FQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL--------------------------------------

Query:  ----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT
            M+HEQ SSLV+SL+  D GEIAAM+LEIEEEEAFHLMESPD LK KLA+ VESLR ST  T
Subjt:  ----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT

A0A6J1BZL0 DEAD-box ATP-dependent RNA helicase 39-like6.4e-11363.78Show/hide
Query:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRT----FTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGS
        MGSR KALLEL      L CPT  +    P +ST   L SR +S  FSRT       ENDRPP++DR++MLLEKFR RKLKGSS I++ES SS SA    
Subjt:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRT----FTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGS

Query:  GNGGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEV
            EKVMTGFKELGL NEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSL GPERALAYLLP IQ+LKRD K N +RSKHPRAF++CST ELSDEV
Subjt:  GNGGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEV

Query:  FQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL--------------------------------------
        FQMAKFIS Y QLK+++DN   QLELQ G SDVSIG+L+GTP+EVSELIE+GSVV DEIKYL                                      
Subjt:  FQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL--------------------------------------

Query:  ---------MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT
                 MLHEQHSSLVESLKR D GEIAAMLLEI+E+EAFHLMESPDT+KCKLA+AV+SL  ST  T
Subjt:  ---------MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT

A0A6J1H541 DEAD-box ATP-dependent RNA helicase 39-like2.5e-16284.97Show/hide
Query:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
        MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASR+FS  FSRT TTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
Subjt:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG

Query:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
        EKVMTGFKELGLYNEVAEA E MGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
Subjt:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA

Query:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL------------------------------------------
        KFISNY+QLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL                                          
Subjt:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL------------------------------------------

Query:  -----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT
             MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLA+AVESLRVSTNRT
Subjt:  -----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT

A0A6J1JT03 DEAD-box ATP-dependent RNA helicase 39-like4.1e-15280.87Show/hide
Query:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
        MGSRRKALLEL HY+NSLSCPTK + FHNPV S NAFLASR+FS  FSRT  TENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG
Subjt:  MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGG

Query:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
        EKVMTGFKELGLYNEVAEA E MGFFVPSEL CVGIPALLEGKNVVLGSLYGPERAL YLLPLIQNLKRDAK+NGVRSKHPRAFVMCSTTELSDEVFQMA
Subjt:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA

Query:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL------------------------------------------
        KFISNY+QLKTAKDNGFG+LELQNGASDVSIGLLIGTPNEVSELIEDGS+VSDEIKYL                                          
Subjt:  KFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYL------------------------------------------

Query:  -----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT
             MLH+QHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLA+AVESLR STNRT
Subjt:  -----MLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT

SwissProt top hitse value%identityAlignment
A5UDI1 ATP-dependent RNA helicase RhlB8.8e-1127.56Show/hide
Query:  FKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMAKFISNY
        F +L L+  V + + + GF   + +  + +P  L G++V   +  G  + +A+L     +L      N +   HPRA ++ ST EL+ ++   A+F++  
Subjt:  FKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMAKFISNY

Query:  RQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHE
          LKTA   G    + Q  A +  + +LIGT   V + ++ G +  DEI+ ++L E
Subjt:  RQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHE

Q0DVX2 DEAD-box ATP-dependent RNA helicase 508.5e-1430.17Show/hide
Query:  NSAVKGSGNGGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRS--KHPRAFVMC
        N   KG  + G      FKE+G  +E+  A+   GF  PS +  +    +LEGK+ ++G   G  + LAYL P++QNL+++      RS  ++PR  V+ 
Subjt:  NSAVKGSGNGGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRS--KHPRAFVMC

Query:  STTELSDEVFQMAKFISN----YRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHE
         T EL+ +V    + IS     +R +      GF Q + Q  + D  + +LI TP     L+++G V  + ++ ++L E
Subjt:  STTELSDEVFQMAKFISN----YRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHE

Q56X76 DEAD-box ATP-dependent RNA helicase 397.7e-3133.85Show/hide
Query:  FLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGN---GGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHC
        + A+   S P + T  T+ D+   T    +LLE+ R R LK S+   ++  SS   V+   +     +K++  F+ELGL  EV  A++E+   VP+E+ C
Subjt:  FLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGN---GGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHC

Query:  VGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSK--HPRAFVMCSTTELSDEVFQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSI
        +GIPA++E K+VVLGS  G  + LAYLLP++Q ++ D    G ++K   PR  V+C T ELS++V+++AK IS++ + ++   +G  ++  Q  + + +I
Subjt:  VGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSK--HPRAFVMCSTTELSDEVFQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSI

Query:  GLLIGTPNEVSELIEDGSVVSDEIKYLMLHEQHSSLVESLKRSDGGEIAAMLLEIEE
         +++GTP  + + IE+G++V  +I YL+L E  +       R  G EI   L  + +
Subjt:  GLLIGTPNEVSELIEDGSVVSDEIKYLMLHEQHSSLVESLKRSDGGEIAAMLLEIEE

Q5VRY0 DEAD-box ATP-dependent RNA helicase 392.8e-3337.56Show/hide
Query:  TTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGE--------KVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGK
        TT  + P    R  +LLE+ R R LKG    +           G G G +        +V+  F+ELGL  EV  A+ EMG   P+E+ CVG+PA+L G 
Subjt:  TTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGE--------KVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGK

Query:  NVVLGSLYGPERALAYLLPLIQNLKRDAKTNG--VRSKHPRAFVMCSTTELSDEVFQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEV
        +VVLGS  G  + LAYLLPL+Q L+RD    G  ++ + PRA V+C T EL+++VF++AK IS++ + ++   +G  ++  Q  + ++ + +++GTP  +
Subjt:  NVVLGSLYGPERALAYLLPLIQNLKRDAKTNG--VRSKHPRAFVMCSTTELSDEVFQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEV

Query:  SELIEDGSVVSDEIKYLMLHE
         + I+DG++V  +IKYL+L E
Subjt:  SELIEDGSVVSDEIKYLMLHE

Q8TDD1 ATP-dependent RNA helicase DDX544.0e-1126.67Show/hide
Query:  NGGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVF
        N  +K   GF+ +GL   V + + + G+ VP+ +    IP +L+GK+VV  +  G  +   +LLP+ + LK  +   G      RA ++  T EL+ +  
Subjt:  NGGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVF

Query:  QMAKFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHE
        +  K +  +  LKTA   G  ++E Q  A   +  ++I TP  +  +  + S+    ++Y++  E
Subjt:  QMAKFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHE

Arabidopsis top hitse value%identityAlignment
AT1G12770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein8.2e-1221.95Show/hide
Query:  FKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNL------KRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA
        F+ELGL + + +++E  GF VP+++    +PA+++G + V+ S  G  + LAYLLP++  +       R + +   +    +A ++  + EL  ++ +  
Subjt:  FKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNL------KRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMA

Query:  KFISN--YRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHE
        + +    +R++      G  ++  +         +++GTP  ++E+ + G + +   ++L+L E
Subjt:  KFISN--YRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHE

AT1G77030.1 hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases1.7e-0924.22Show/hide
Query:  GFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMAKFISN
        GF+ L L   V  A+++ G+ VP+ +    +P +L G +VV  +  G  +  A+L+P+++ LK+     GV     RA ++  T +L+++  +  K +  
Subjt:  GFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMAKFISN

Query:  YRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELI-EDGSVVSDEIKYLMLHEQHS
        +  L+ +   G   +E Q         ++I TP  +  L+ E   +    ++Y++  E  S
Subjt:  YRQLKTAKDNGFGQLELQNGASDVSIGLLIGTPNEVSELI-EDGSVVSDEIKYLMLHEQHS

AT3G06980.1 DEA(D/H)-box RNA helicase family protein3.4e-1025.77Show/hide
Query:  FKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKH--PRAFVMCSTTELSDEVFQMAKFIS
        F E+G   ++ +A++E  F  P+ +  +    +++GK+ ++    G  + LAYL+P+IQ L+ +      +S    PR  V+  T EL+ +V    + IS
Subjt:  FKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKH--PRAFVMCSTTELSDEVFQMAKFIS

Query:  N----YRQLKTAKDNGFGQ-LELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHE
             +R +      GF Q  +L+N   +  + +LI TP   + L+ +G +    ++  +L E
Subjt:  N----YRQLKTAKDNGFGQ-LELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHE

AT4G09730.1 RH395.4e-3233.85Show/hide
Query:  FLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGN---GGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHC
        + A+   S P + T  T+ D+   T    +LLE+ R R LK S+   ++  SS   V+   +     +K++  F+ELGL  EV  A++E+   VP+E+ C
Subjt:  FLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGN---GGEKVMTGFKELGLYNEVAEAVEEMGFFVPSELHC

Query:  VGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSK--HPRAFVMCSTTELSDEVFQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSI
        +GIPA++E K+VVLGS  G  + LAYLLP++Q ++ D    G ++K   PR  V+C T ELS++V+++AK IS++ + ++   +G  ++  Q  + + +I
Subjt:  VGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSK--HPRAFVMCSTTELSDEVFQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSI

Query:  GLLIGTPNEVSELIEDGSVVSDEIKYLMLHEQHSSLVESLKRSDGGEIAAMLLEIEE
         +++GTP  + + IE+G++V  +I YL+L E  +       R  G EI   L  + +
Subjt:  GLLIGTPNEVSELIEDGSVVSDEIKYLMLHEQHSSLVESLKRSDGGEIAAMLLEIEE

AT4G34910.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.5e-1031.03Show/hide
Query:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVF-QM
        E+    F+ELGL + +  A+ + G   P+ +    IP +LEGK+VV  +  G  + LAYLLPL+Q L   A +   +   P AF++  + EL  +V+ ++
Subjt:  EKVMTGFKELGLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVF-QM

Query:  AKFISNYR-QLKTAKDNGFGQLELQNGASDVSIGL------LIGTPNEVSELIEDG----SVVSDEIKYLMLHE
        +  I   R QLK        QL     ASD+   L      L+ TP  + +    G    + VS+ +  L+L E
Subjt:  AKFISNYR-QLKTAKDNGFGQLELQNGASDVSIGL------LIGTPNEVSELIEDG----SVVSDEIKYLMLHE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGTAGAAGGAAAGCTCTTCTCGAGCTCTACCACTATGTGAACAGCCTCTCATGTCCAACGAAAGGGAACGTTTTCCACAATCCGGTAAACTCCACGAACGCTTT
CTTAGCTTCTCGACATTTTTCCTATCCCTTCTCCAGAACCTTCACAACGGAAAATGATCGACCGCCACGAACGGACAGAGAAGCGATGCTTCTTGAAAAGTTCAGGAACA
GGAAACTCAAAGGCTCGTCGAATATCTCGAGAGAATCATTGAGTTCTAACTCTGCTGTGAAAGGGAGTGGGAACGGAGGTGAGAAAGTGATGACAGGTTTCAAGGAGTTG
GGGCTTTATAATGAAGTGGCGGAGGCTGTGGAAGAGATGGGATTCTTTGTTCCTTCTGAGTTGCATTGTGTAGGGATTCCAGCTCTTTTGGAAGGGAAGAATGTGGTATT
GGGATCTCTCTATGGACCAGAAAGGGCTTTAGCTTACTTGTTGCCTCTCATTCAGAATCTAAAAAGAGATGCAAAAACAAATGGTGTAAGGTCCAAGCATCCTCGAGCGT
TCGTTATGTGCTCAACCACGGAGCTATCTGACGAGGTGTTTCAGATGGCGAAGTTCATCAGCAATTACAGGCAGTTGAAAACTGCAAAGGACAATGGTTTTGGTCAATTA
GAACTTCAGAATGGTGCATCGGATGTCTCGATCGGCCTGTTAATCGGAACCCCTAATGAGGTCTCTGAACTCATTGAAGACGGGAGCGTGGTTTCGGATGAAATCAAGTA
CTTGATGTTGCACGAACAACATTCGTCCCTTGTGGAGTCTCTTAAGCGAAGCGATGGAGGAGAGATTGCTGCTATGCTTCTTGAAATCGAGGAAGAAGAGGCATTCCATC
TTATGGAATCTCCAGATACTCTGAAATGTAAACTTGCGAATGCAGTCGAGTCACTTCGTGTGTCCACAAATAGAACTTAA
mRNA sequenceShow/hide mRNA sequence
CAGAGGCAGGTTGAACGGCCGAGCAGCACCGCCATGGGAAGTAGAAGGAAAGCTCTTCTCGAGCTCTACCACTATGTGAACAGCCTCTCATGTCCAACGAAAGGGAACGT
TTTCCACAATCCGGTAAACTCCACGAACGCTTTCTTAGCTTCTCGACATTTTTCCTATCCCTTCTCCAGAACCTTCACAACGGAAAATGATCGACCGCCACGAACGGACA
GAGAAGCGATGCTTCTTGAAAAGTTCAGGAACAGGAAACTCAAAGGCTCGTCGAATATCTCGAGAGAATCATTGAGTTCTAACTCTGCTGTGAAAGGGAGTGGGAACGGA
GGTGAGAAAGTGATGACAGGTTTCAAGGAGTTGGGGCTTTATAATGAAGTGGCGGAGGCTGTGGAAGAGATGGGATTCTTTGTTCCTTCTGAGTTGCATTGTGTAGGGAT
TCCAGCTCTTTTGGAAGGGAAGAATGTGGTATTGGGATCTCTCTATGGACCAGAAAGGGCTTTAGCTTACTTGTTGCCTCTCATTCAGAATCTAAAAAGAGATGCAAAAA
CAAATGGTGTAAGGTCCAAGCATCCTCGAGCGTTCGTTATGTGCTCAACCACGGAGCTATCTGACGAGGTGTTTCAGATGGCGAAGTTCATCAGCAATTACAGGCAGTTG
AAAACTGCAAAGGACAATGGTTTTGGTCAATTAGAACTTCAGAATGGTGCATCGGATGTCTCGATCGGCCTGTTAATCGGAACCCCTAATGAGGTCTCTGAACTCATTGA
AGACGGGAGCGTGGTTTCGGATGAAATCAAGTACTTGATGTTGCACGAACAACATTCGTCCCTTGTGGAGTCTCTTAAGCGAAGCGATGGAGGAGAGATTGCTGCTATGC
TTCTTGAAATCGAGGAAGAAGAGGCATTCCATCTTATGGAATCTCCAGATACTCTGAAATGTAAACTTGCGAATGCAGTCGAGTCACTTCGTGTGTCCACAAATAGAACT
TAAAACTTGATATCGACTTGTTTTACGCGATTGCACGTTAACTTCGAAAGACTGAATACGAATGGACTGTTGTTTTCGTGTTTTTGGTGATAAAATTATCATTTCATTGC
AAGACTGATTACATTCCAGGAGTTTGAAAGATACAAGGCTGCATACAATGGCGAGCTCTTAGGAAGAGGACAGAAAAACAAATGAAAAGGTAGATTCTGAGATGATATTT
TGTCTATGATTGTGTCAATGTTTCTCTTCACTTCCAGGTGAGTAGAGGAAGCTGAGTTCTAGCAGGGGTTACGACGTTTCCATTGGAGTCGTATAATATGACGCCCGAGA
AGTCCGGTAGCTGACACTTCCCACCCATGAGTATGTTCTTCTCCCACACAGCAGCTCGTTGCTCTCTACTGAAGAACATCTCGTCGTTGCCATTCTCCGGCTCGGTGGCA
TTCACAACACAGGTATTCACTCGTTGCGTAGTCACGACTGTCGCTTCTTGGTTAAGCTCTATTACAGGATCCTCAAACTCGTAGCCATAATCCAAGCAAGCATTCCAGCG
ACGACGCCATTTCCGAGCATGGGAAGCACACATAAACAATGCAAAAGCACACAAGAGAAGGCTCGCACCAGC
Protein sequenceShow/hide protein sequence
MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRTFTTENDRPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKEL
GLYNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGVRSKHPRAFVMCSTTELSDEVFQMAKFISNYRQLKTAKDNGFGQL
ELQNGASDVSIGLLIGTPNEVSELIEDGSVVSDEIKYLMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLANAVESLRVSTNRT